MSTRG.12636.1.p2 (mRNA) -

Overview
NameMSTRG.12636.1.p2
Unique NameMSTRG.12636.1.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000096_pilon:523478..524509+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12636.1.p2 ID=MSTRG.12636.1.p2|Name=MSTRG.12636.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1032bp|location=Sequence derived from alignment at sc0000096_pilon:523478..524509+ (Clytia hemisphaerica_ch_hm2_pilon)
CTATGCGAATAATACTTCAAGTTTACTAGGTCCTTCAGTTGAAATACAAA
TTGCAGATGAGTCAAACACTGCTTCTAATCAAGAGATTGCCACACTAAAA
AATTCCATTGTGACAGAAGTGAAAACTATGCTTAACGACTTCAAACAATC
TCTCAACGCTGGGGATGAGACATTATCCATCATAGCTCCTTCAAGAGACT
CAGAGTTGTTACCTAATGGAAATACATTAGAGACCTCAAGTGGGGAAAAT
TTACCTGGAGGGCATCCTCCAGAGAAAAGGCTCAGACCATTGTCTGATGT
TGATGATGATTTTTCTGACCTTCTACCAAAGCGTCAGAAGATGGACAATC
CTACATCAACGTCGTCTTCAGATGACTTGactaatgatttttttgattta
gttGATCAAGAGATGCCTGTTAACATCCTTTATGGGGCTGAAGTTCCTGC
CAAACTAGCTTCCCGAATAATAGgacattttgttgaaaaaatgccGAAGC
CAGGAAATTGATTTGTGACCGTCACAAACTACCTGCTAATTGCTCTGCAA
TCTGTGTTCCCAAGTTGAGGGAATCCATTCTCCAGATGAAATCTTTCAAT
GAGTACTCGAGACGTCAGGAGAAATCCTTGTTCAATATACAGAGTAGTAT
TATTCAAGCTTCATCGTGTTTTGTTGACTTGCTTGCTGATGCAATTCAAG
CAGAAGATAACTCAAAAGTTATTGACACGCGACTCCTATTGAGGAATTGT
TTCGATGGTGTAGCCCTTTTGGGTCATGCAAGCAGATCAGTTTCCAACAT
GAGAAAGAGAAACCTTAAAAGCTGTCTTGATACAAAATACCAGGCACTCT
GTAACCCAAGCAGACCCACATCAGAGTATTTGCTGGGAGATGACCTTGAC
AAAGGGACGAGAGAAGCTATAGAATCCACCAAGCTGGCTAAATCTTACTC
TCCCCATGGCAGTAGCTCTGACAGAGGGAAAAGGTATAAACACTCCTCTG
CACCAACCAAAGAAGCTCAGAAATCtagtttt

Coding sequence (CDS) from alignment at sc0000096_pilon:523478..524509+

>MSTRG.12636.1.p2 ID=MSTRG.12636.1.p2|Name=MSTRG.12636.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=447bp|location=Sequence derived from alignment at sc0000096_pilon:523478..524509+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATCTTTCAATGAGTACTCGAGACGTCAGGAGAAATCCTTGTTCAA
TATACAGAGTAGTATTATTCAAGCTTCATCGTGTTTTGTTGACTTGCTTG
CTGATGCAATTCAAGCAGAAGATAACTCAAAAGTTATTGACACGCGACTC
CTATTGAGGAATTGTTTCGATGGTGTAGCCCTTTTGGGTCATGCAAGCAG
ATCAGTTTCCAACATGAGAAAGAGAAACCTTAAAAGCTGTCTTGATACAA
AATACCAGGCACTCTGTAACCCAAGCAGACCCACATCAGAGTATTTGCTG
GGAGATGACCTTGACAAAGGGACGAGAGAAGCTATAGAATCCACCAAGCT
GGCTAAATCTTACTCTCCCCATGGCAGTAGCTCTGACAGAGGGAAAAGGT
ATAAACACTCCTCTGCACCAACCAAAGAAGCTCAGAAATCtagtttt
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12636MSTRG.12636Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12636.1.p2.exon1MSTRG.12636.1.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12636.1.p2MSTRG.12636.1.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000096_pilongenomesc0000096_pilon:523478..524509 +