|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000096_pilon:403914..411133- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12627.1.p1 ID=MSTRG.12627.1.p1|Name=MSTRG.12627.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7220bp|location=Sequence derived from alignment at sc0000096_pilon:403914..411133- (Clytia hemisphaerica_ch_hm2_pilon)
CATGCTATAAAAGACCACAACAGCATCATATAGTCATCATCATCGCATTT
AATGACGACCAGTGAAACTTGTGAATGATTATAATGAAGCTCTCAATACT
TTTAGTTCTTTTCTTCGTGGCCTTTATCCATGCTGGTGGCGGTGATTGCG
GTAAGTTTAAATGAAATCTATGATAAGTCGTATTGACTAGCCATAACTTT
CATTAAAGTGCCACCGCAGCAAAACGAACACATGGAGTTGAATTTGCTTT
TAAAAGGAATGGTATTAGTCCTACAATAATTTTTGTTAAGAGCATAGAGG
TATAAAGAAAGACAGGAGATGAATGTGTCGGTAATTGGTCGTTAAAGTTT
TTTGATTTCTTTTATGTAATAAATCAAAAGAAATTCTACGCTCGCCCGAT
GAAATACGACTTTTTAGTAGAACTCAAGTTTGCTTTGAACATTCTTACTA
TCAGCATCGAAGATTTCTAGCCTTCTAATATACGAGAATAAAATAAAATT
TAGCTCCACGAAATAAGTTTGCGTTCAATTTTGTCATCCATTAAATTTTG
TTTTGAAAAGATATTTTCTCCAGCCAGAAAATAAAAAGTTCTTTATAAGC
ACACACAATTTCAGACCCAATTTGTAGCCAAAAAGTCGCTGGAGAATTTT
GGAGGTAAGTATTAAGCAATAGAGTTCACCTTGAAGAAAATGTTGATCGA
AAAATCTTGTCATTTGATGAAGGATTACAAAGTTTACAGGCCCTTTTTTA
ATCCAAATATTTCCTTACACCAATGTCAGAAACAATGGATCTCGCCTCAT
CTAATTTCACTGAAATAAGCCAATAAGATTTCACCTATCAACAAAAGAGC
TCATTAAAAATGCACGATATATGAGATTATGAGCATGCATACCTCGTAAT
TTTTTTAATCGTAGGGCGAGCATGGTTACAATAGCATACTTCTCCTGTTT
CTTTATACCTCCATGGAAAGAGTGACCTCTCATCTGATCTGAGACAAAAT
TCATTCTTCAAATGCTAACAAATGTGTCAAGGGAGTGATTTACAGTTATA
GTTTCAAAAGTAAAAAGCCCATTTTGTTTTGGCGTCTACTTAGAGTGACA
TTCGTGCCTTGCCTTACACGCTTTTTTATAAGAACAATTTTATAAAAATA
CAATGCTGGACTTTGGCCAAAACCTAAGAACAAATTAAGAACAGTCTTTC
CTTTTCGGTCGCTTTAGGCTCCCTGCGGGGGCAAGAACCCGATATTTTGA
GTCCTATGAAAATAATCTGGCAGTCCCTACAGCCAGGGGTTACTGCTATG
TGCGGAACTAGTACTTCAAACCATGACCTTTAGAGACACTAGAAATTTTG
ACGATAGAATGTCAATTTTTTACCAAGCACACAGCAGCCTTTAAAAAACT
ATTGGTCAAGAAGAAACTGATTAATGTTTCCGAATAATGTAGTCGAATGT
TTCTATGACTCGAGCAATTTTCTCAATTTCCTCTTCATTGCTCAAAACAC
TCTATACACGTTTTTTTAAGAAACACACTTTTAAGAAACATATTTAAAAA
CTAAGAAACATCTAAGAAATGCTGGGGCTGAGAATGAGAAAATTTTTTAA
TTCGTTTTTTTTAAGAACCTTCCAATCCAGCCTTCCATGAGGCTGATTAT
GTCAAAAAGTTTAGAAACATGTAAGAAACATTTAAGGCTCAAAAGGCCGA
TTTCTTAAGAAATAAAAGTTTGTTAAAAAAATACAAAAATATATATATCT
TGAAAATAAAGAAAATATTCTACCTAGATTTTTCCGTAAATTTGTCTGAG
CCTTTAAGTGAGAAAAAATATCACTAAAATCTAGAAACAAAATATTTAGT
TATGAAATATTGAGTGGTGTGACTAAATTGTTTTGTTTATTTTTATTTGT
AGAATGTGCAGACGGTATTGGTACATGTGATAAGAGATATCATTGTGTAT
CAGCTTCTATAAATACTTGTAAAGTTACACGTGGAGTATGCAAGCCTACC
ATACCAGGTAAGTGTCTAGCTTATAATCAACCTATTTTTATACGCCAATT
GCCGCGCGGAAATTTTTTGGTCCGTTTTACCACCCTCAAACCGTCCCAAT
CTTTTCTTCACACCTATCGACAATAGAACAAGGTGTAAAAAAAAGATTGG
ACCAAGTTTAGGGGGATAATTAATTAATAGAGTGGCACGCGCCTGACTGC
ATTACTACGGTCAAAAAGGTGCATTGCGTCTTTCTCGAAGGGAAAACTGC
CACCCCAACCATTTACTAATCCAATCTAATTTAAAACTTCAATTGTTCGT
CTTAAAAAGGGTTTAAAACGAAAATTTTGACATCATTAGAAAATTATGTT
TTTAGTTTTCCCAGACAACGGAAATTTTCAGTTAAAAAAGAAGGGGGTCT
GAGGTATGACCAACTATGGTCAATAGGCAAAGTACATAGATGCTAAATGT
CGTGCTTTGGCTGAAAAGTGTTCCAATGACCTAGGTCACGTGATATTAAA
ATAGAATTTCAGCGCTTGACCAATAAGAAGCTTCGCAGGCTTTCGAAATC
AATACACAATATTAGCAAAACTTTTTGCGATATTCATTTTTTTTGCTTGG
AAGAGCTTAAAGTACAACATCTAGCCCTTCGGGATTTACAGAAATCTGTG
GCAGAGTGCCGGTAAATTAAGCTTTTTTACTTTTTAAAACGTAAATTGAA
TAGAAAACAGCATGGCAACGGATGCAAGAGTCATATGAAATAGACTAATA
TATTGGCTTATCACTCAAATAAATTGAAAAATAGCCTAAATCACGCATAA
TGCAAGAAAAATTTGAAATCAAGCCATGCGCAAGAAAAAGCCTAGATGAT
ATGCTATCATCCGTTAGCCATGGAAACGGATAGTAAACGCAGGAAATATA
CATATGCAGAGTTACAGCCATCACGGCGTTTTACCGGAAAAAATAGTGGC
AGCGGAGTTTGAAACAAACGCTGTAAAAGCAGGGCCTATCCAACACTATA
AACACTTCTTCCACAACTGCTTACTCCGCCCTGGGCTAAAGCCATCAATT
AAGGGCTCTGACCATAGTGAATTTTTCATAATTGCCGTGTTTAAAATGTG
TTTTCTGACTGATATAACCAACAAAACTATGGTATGTTATACATTTTCTG
TTAGACAAACTATTCCTGAATCTGAAAATTCAAAAATTGCATTGAAAAAA
TTTGATGAAGAAGAAAATGAAGACTTTTGCGAGGAAGAGTATTTCAACTT
TGAAGAGCTTAGTTTCGGCGAAGAAAAAACATTTTGAAAGAATTTTCGCA
GTAGATGGTGTATCTTTTACCGAACAATAGAAATTTTTGCGGAAAATTTT
TGTAAATGCTTCTTTGTCTCGAAATCTTCAAAATAGTGTTTTTTCATCAA
TTTTTCATCTGGATTTTGCTTTAAAAAACTGTCATAACTTTTAACACATC
TTTTTGGAAAAATTTTCCGCAAAATTTAAAATAGTTCAATTCTTTTCGGA
CAGTGTAAAGAAATTTTGAAACAAAAAAGTTAATTACCCATTAAAACTAA
GCACTTTTTGTAAAAGAGGGTGATGCAACATATTATTAACATCTTTTTAA
AGTTCATAACGTCATTTTTGCAATTAAATTCTTAATTACTCTCAAGGGAT
TCGATTGAAAAGCAATTTATAAAGGCAATTCTTTGTTAAAAGTGTTAAGG
AACCTGAAATATAACTTTTATGTTCAAATACCAAAATCAATTTTTGGACT
ATGGTCAGAGCCCTTAAACCAATCAAACAAACTGCTTGGGTGTCAATTAA
TATGAACCAAAGAGAAACTTTGATAAACATTGCAAATTTAGTGGAACACA
CACAAGAACATAGAAGTGGTACGATTCGAAACTTTTTTTCGGAACACCCT
GAACTAAATTAGAAATGTTGATTTTTTCACGATAACTTCTTCTTCTTTTT
AAGTTTATCTCAGTACGCAACCTACAACAAACTCCTCGGACATAACCCAA
ATAAACGGTGAGTTCAAAACATTCTTATTTTTCTTCTCCCCATTAAAGGT
CGTATGGCGTTTTTTCAGTTGTTTTAACGCTGATAGCAACAGGGTGGTGA
AACTAGCTTTGCGCTCTTATAAAAACTGGTAGCTCAAAAATATCTTGCAT
CTTTGTCCAAAATAAGAGACGTCCTCTACTCCACTTTATCCTTCCTTTTA
CATTGAATAGTCTGATTTGAGTTAATATTTCCATATCCTTGCTGTAAGCA
ACGCGCTTATTTATAAGAATGGTGTTTTTTCATTTCACCATGGATATTCT
TGACTTTTTTTGGGAAAATTACCCTAAAGTACTCTTACGGTATTCCTAGG
GATACTTAGCCTAAGGCCAAGAGTGACTGCCTAAATTTAAAATGCAATAC
ATGCCTCAACCAAAATAATTTTTCAGGTCCGGTGGAACAACCATGAAAGT
GGGGAGGCTTAGGGCTCAAAATGAGATAAAATTCGCTAGGAATTTGAGGA
AAAAATCTCATTTGGGAGGCTGAAGCCTCCCCAGCCTCTCTGCTCCCACC
GGGCCTCTATAGCCGTGGTTACACTACATTAATATCTTTAAAATTTTTTA
AATTTTTTAATCAAAAATACATCAAAGAAATTAACTATTTTCTTTAAAGT
CTTTTTGAAATTTTTGTGTTGTATCAAATCTTCAATCGTTTTTTCTCAAC
TCATTTCATTGCACGTATTGTGTTAATTCTTATCATAGTGCGGAAAGGGG
TCTGATACCCCCTTCTTATATGATCCCCCCTTCTTGGCATCCCCCCAACC
TTTAAAATGTCTATCCCCCAAGGGTTTTGGGCTAAATTTTCGAAAATATA
TAGTGTATAGTGCGATCCGATAATCCCCTTCTCGCTGGTACCCCGTAATA
ATAACTTGCTTCTTGTTGACTACTCTAACAGAAAACTTCCTTTCGTGCAG
ATCAAATTTCATAACAGTGCTGGAAAATAATCTACAATATATGTAAGCCC
CCCTTCTTAAACGACCCCCCCCTCCTTGCTATCCCCCCTTTTTAATGAAA
ATTTCTGATCCCCCTTCTTCACTTTTTTGGAAGGTGTCATCCCCCCCCCC
CTTAAGAAAAGGCGTCCGAACTATGCTTATGAAACGGAAATTTCAGAGGA
AATATTCGAAAAAGAAAAGTCGAGCTAAAAGATCTTGCTGGGTACGCCTA
GTGGTTAAAGTTGAGGAACGAAAAAAGCACCTACAACAACATATTTGCTG
AACTTCGTCTAAGTGACCAAGAAGAATTTATATCTTATTTAGAACTTATC
CTATCTTTCACCCCTATCTCTTCCAAACGCTAGAAAATCCATTCATCGAA
AAAAATGTACAGAACTATCATGTCGGTGGCTTTGATCTCGAGAGAAGTGA
AGAAAAAAACTTTAAACTCTTTACCAAAAAAATGGTAAAGAATCGCAAGA
AATAATTTCTTTTTCAAGAATTTATACGTCTTTATTTTCTTTAAAAGAGG
GCTGTTACACTTGTAAATTTTTTAATCATAAAGACTTGATTAAAAAATTT
CAGAAATTTAGAAATAAATTAATGTAATGTAACCACGCCTTATTTGTGAG
AGCCTTTAGGACTACTGTGCATAATTTGCAATTTATAGAGAAGAATTACT
CATTAATTTCATCTTTTTATTTATTTTTTTAGATATATGTGCAAGTGCAA
ACAATGCATACAGTGGTGTTACAGTTAAATTCAATCCATCAATGGCACAT
TACGCACAACTCCATGCCGAGTATTTGGTGCACAAAGCAGAAAGAGGAGA
AACAGTGGGATCTGTACATCAAAAATGCAAATTAAATTTATTTCCAGAAT
TAGAAACGATACAAGGGAACGTCATGGAATATCGAAATGGAGGTTATGTG
GAAGATCTGAAGAAAGCTCTAAAAGTGTGGTAAGTAGAGGTGGCGGAATT
AAAATCTACACCCAACTACACCCTTCTAACACAAACGGGTGGGCCCAATC
CCGCTGGAAAAATTTGCCAAAAAATCGTTTCCAGTTAAAAATTATACTTT
TAAACGAATGTTAATCCTCACTTAAAATATTATGCTCTTTTTTCCATCCA
AAATGAATTTTCTGACTTGAAAACAATGGAATTCAAATCCCAGCCATAAA
AAGAGGGGAATATCAGTCCCAATCAAATTTCGGTTTGTTAATTTAACTGG
CTGAAAGAATCCTGTCGGGTCTGTGGGAAAAGGAATTACATGAGCAACTA
AACTAAGTGTACCGGGTGGTTACACTTTTTAGTTATTTCATTGTGTCGGT
TTGTTATTTAAATTTCGAAACACGGAAACAGCCAAAAATGAAAATGTATT
ACGACCATGACTGTACCGTACTTTTTACTATTTTCTCTTCACTTTCAGGT
ACGATGAGGGCGCAAGTGGCGACCATTATAAAGCAATGGTTGATAACAAT
CTAGTCGGTTGCGGTGTCGCCAAAAGTGGAAATATCATAAGAGTAGTGGC
TTGGTACGGTAAACCCAAGTCAAATGGTAAATGGGCATTTTAAAGTGATA
ATAAATTCATTGTAATTTATCATTTAATTTTTTTTGTTACTTTATTGATA
ATGATGATGATTATACTCATTTATATAAAATTATGTTCGACGTCATGTTT
TATCGTTTATCTTAAAATTTAAATATTTCGACCGCCTTTGGGTTTAAACC
GATGGATCGCTTAAAGATAGGTAGCGTTTTTCTAATGGCCCCCAAAATGT
AGGTTTGAAATTTTAGCGATTTCTCGAGATCTCTTTAAAGGTTTTGTTTT
TAAATAACATTGATATCGTTTGCTTACTCAGCAATTTTAATTCACAAGCT
TTTTCACATTGGATTAACACGGATGTGGAGCAAGATTGGTCAGAAAGTGG
AAAAGAAAAACATTTTTTTGCTTATATCAGCATAATATAACAATAGGCAG
ACACTGTCCTGATATGAAATATGTGTCTGATATGAAACGGAAACACTTAT
GTAAAAATAAAACCTTTAAGATATGAATACAAAATTTTGACCATTGTTTG
GAAATGTGATTTCGAGGGTTTTGGGTATAAATTTGTTGATTGAATCTTTA
CAGTATATCCCTGGTTGTTAAAACCAGGTGAATAAACCCAGTGGTAATAG
CGGTAGAAACTATATGAACATATTTTTGTTTTCTCTTAAATTTACGACCC
GATGAATGTAAAATTTATGA Coding sequence (CDS) from alignment at sc0000096_pilon:403914..411133- >MSTRG.12627.1.p1 ID=MSTRG.12627.1.p1|Name=MSTRG.12627.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3135bp|location=Sequence derived from alignment at sc0000096_pilon:403914..411133- (Clytia hemisphaerica_ch_hm2_pilon)
GTACGATGAGGGCGCAAGTGGCGACCATTATAAAGCAATGGTTGATAACA
ATCTAGTCGGTTGCGGTGTCGCCAAAAGTGGAAATATCATAAGAGTAGTG
GCTTGGTACGGTAAACCCAAGTCAAATGGTAAATGGGCATTTTAAATATA
TGTGCAAGTGCAAACAATGCATACAGTGGTGTTACAGTTAAATTCAATCC
ATCAATGGCACATTACGCACAACTCCATGCCGAGTATTTGGTGCACAAAG
CAGAAAGAGGAGAAACAGTGGGATCTGTACATCAAAAATGCAAATTAAAT
TTATTTCCAGAATTAGAAACGATACAAGGGAACGTCATGGAATATCGAAA
TGGAGGTTATGTGGAAGATCTGAAGAAAGCTCTAAAAGTGTGTTTATCTC
AGTACGCAACCTACAACAAACTCCTCGGACATAACCCAAATAAACGAATG
TGCAGACGGTATTGGTACATGTGATAAGAGATATCATTGTGTATCAGCTT
CTATAAATACTTGTAAAGTTACACGTGGAGTATGCAAGCCTACCATACCA
GATGATTATAATGAAGCTCTCAATACTTTTAGTTCTTTTCTTCGTGGCCT
TTATCCATGCTGGTGGCGGTGATTGCGGTACGATGAGGGCGCAAGTGGCG
ACCATTATAAAGCAATGGTTGATAACAATCTAGTCGGTTGCGGTGTCGCC
AAAAGTGGAAATATCATAAGAGTAGTGGCTTGGTACGGTAAACCCAAGTC
AAATGGTAAATGGGCATTTTAAATATATGTGCAAGTGCAAACAATGCATA
CAGTGGTGTTACAGTTAAATTCAATCCATCAATGGCACATTACGCACAAC
TCCATGCCGAGTATTTGGTGCACAAAGCAGAAAGAGGAGAAACAGTGGGA
TCTGTACATCAAAAATGCAAATTAAATTTATTTCCAGAATTAGAAACGAT
ACAAGGGAACGTCATGGAATATCGAAATGGAGGTTATGTGGAAGATCTGA
AGAAAGCTCTAAAAGTGTGTTTATCTCAGTACGCAACCTACAACAAACTC
CTCGGACATAACCCAAATAAACGAATGTGCAGACGGTATTGGTACATGTG
ATAAGAGATATCATTGTGTATCAGCTTCTATAAATACTTGTAAAGTTACA
CGTGGAGTATGCAAGCCTACCATACCAGATGATTATAATGAAGCTCTCAA
TACTTTTAGTTCTTTTCTTCGTGGCCTTTATCCATGCTGGTGGCGGTGAT
TGCGGTACGATGAGGGCGCAAGTGGCGACCATTATAAAGCAATGGTTGAT
AACAATCTAGTCGGTTGCGGTGTCGCCAAAAGTGGAAATATCATAAGAGT
AGTGGCTTGGTACGGTAAACCCAAGTCAAATGGTAAATGGGCATTTTAAA
TATATGTGCAAGTGCAAACAATGCATACAGTGGTGTTACAGTTAAATTCA
ATCCATCAATGGCACATTACGCACAACTCCATGCCGAGTATTTGGTGCAC
AAAGCAGAAAGAGGAGAAACAGTGGGATCTGTACATCAAAAATGCAAATT
AAATTTATTTCCAGAATTAGAAACGATACAAGGGAACGTCATGGAATATC
GAAATGGAGGTTATGTGGAAGATCTGAAGAAAGCTCTAAAAGTGTGTTTA
TCTCAGTACGCAACCTACAACAAACTCCTCGGACATAACCCAAATAAACG
AATGTGCAGACGGTATTGGTACATGTGATAAGAGATATCATTGTGTATCA
GCTTCTATAAATACTTGTAAAGTTACACGTGGAGTATGCAAGCCTACCAT
ACCAGATGATTATAATGAAGCTCTCAATACTTTTAGTTCTTTTCTTCGTG
GCCTTTATCCATGCTGGTGGCGGTGATTGCGGTACGATGAGGGCGCAAGT
GGCGACCATTATAAAGCAATGGTTGATAACAATCTAGTCGGTTGCGGTGT
CGCCAAAAGTGGAAATATCATAAGAGTAGTGGCTTGGTACGGTAAACCCA
AGTCAAATGGTAAATGGGCATTTTAAATATATGTGCAAGTGCAAACAATG
CATACAGTGGTGTTACAGTTAAATTCAATCCATCAATGGCACATTACGCA
CAACTCCATGCCGAGTATTTGGTGCACAAAGCAGAAAGAGGAGAAACAGT
GGGATCTGTACATCAAAAATGCAAATTAAATTTATTTCCAGAATTAGAAA
CGATACAAGGGAACGTCATGGAATATCGAAATGGAGGTTATGTGGAAGAT
CTGAAGAAAGCTCTAAAAGTGTGTTTATCTCAGTACGCAACCTACAACAA
ACTCCTCGGACATAACCCAAATAAACGAATGTGCAGACGGTATTGGTACA
TGTGATAAGAGATATCATTGTGTATCAGCTTCTATAAATACTTGTAAAGT
TACACGTGGAGTATGCAAGCCTACCATACCAGATGATTATAATGAAGCTC
TCAATACTTTTAGTTCTTTTCTTCGTGGCCTTTATCCATGCTGGTGGCGG
TGATTGCGGTACGATGAGGGCGCAAGTGGCGACCATTATAAAGCAATGGT
TGATAACAATCTAGTCGGTTGCGGTGTCGCCAAAAGTGGAAATATCATAA
GAGTAGTGGCTTGGTACGGTAAACCCAAGTCAAATGGTAAATGGGCATTT
TAAATATATGTGCAAGTGCAAACAATGCATACAGTGGTGTTACAGTTAAA
TTCAATCCATCAATGGCACATTACGCACAACTCCATGCCGAGTATTTGGT
GCACAAAGCAGAAAGAGGAGAAACAGTGGGATCTGTACATCAAAAATGCA
AATTAAATTTATTTCCAGAATTAGAAACGATACAAGGGAACGTCATGGAA
TATCGAAATGGAGGTTATGTGGAAGATCTGAAGAAAGCTCTAAAAGTGTG
TTTATCTCAGTACGCAACCTACAACAAACTCCTCGGACATAACCCAAATA
AACGAATGTGCAGACGGTATTGGTACATGTGATAAGAGATATCATTGTGT
ATCAGCTTCTATAAATACTTGTAAAGTTACACGTGGAGTATGCAAGCCTA
CCATACCAGATGATTATAATGAAGCTCTCAATACTTTTAGTTCTTTTCTT
CGTGGCCTTTATCCATGCTGGTGGCGGTGATTGCG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000096_pilon | genome | sc0000096_pilon:403914..411133 - |
|
