MSTRG.12624.1.p2 (mRNA) -

Overview
NameMSTRG.12624.1.p2
Unique NameMSTRG.12624.1.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000096_pilon:333187..334997+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12624.1.p2 ID=MSTRG.12624.1.p2|Name=MSTRG.12624.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1811bp|location=Sequence derived from alignment at sc0000096_pilon:333187..334997+ (Clytia hemisphaerica_ch_hm2_pilon)
aTAAATTCTTGCTAGAGAGcattgaatttatttattcattattttttgca
acAACAGAAAGTTTTTTCAAGTATTTACAAAATGGTTCGTATCTCCTTTT
TGGTgacttgttttcttttcatattgATATTCCATTGCAATACTGATGGG
TTTCAGTTTAAAGAATTCGGAATGTTGGTATGCTCGAAAAGAAACAATAT
AACCATTATTGCTGATTCTGTTGATAGCGAGCTTCTGGATGACCTCTTGC
ATCGTTTGGAGCCTTTGACACGGAACGAAGATTGCTTCACGATCAATCTA
TACCTCCCGAGTGATGGATTTGTTGTCCAATGGCGACCGAACTTCAATGT
CAATCAATTGGAATGGAATTTCTATGACAGATTCCCCTTTTTTCTTCAAA
GGTTATTCCTCACAACGATTTGAAAAGTTTCTTGAAGCGTCTTTATGATG
AAGAGCTGATGGGTAACAACAATGTGAAACGAACATTGGTCTATTTTGAT
GGAGGttatgattattattatgattattattaGTGTAGAAGCGCTTCAAA
TATTGCAGAGGCTTCAAGATGACCGGTTATGGAATATCATTCTTCACTGT
CAAAGTGGTTGTTCTCCTCCTTTCAATTGGTTGCCGATCTATCGGTTTAC
CTTTTCATTTCAGTCTTATGCTATGCCTGTAAAGGCAAAGAATATCATAC
TTAAAAATCTACTTGATGTGATAAAAGAGCCAGATTTCAACCGATATGAA
TACATGCACCAATACCTTCTTTCAAGAGATGACCTGTTTAATGAAACTTG
CATGAAGGATATAACTATGATCAATATCTATATAACCGAAGGCATTCATG
atgtttattttccattttttgttgGCTTATTGAAAAAAGTGAATGCTTTA
cgtgaaattaaaaagaaacaacCGTTGAGGATCAGCTTCAGGACCTTTac
cactttttttgattttattactaATGCTCGTaaaaaaaCGATGAATGGAA
TGTTTGGCCCTGGTTTGATGATGGATGTTTGGAAACCAATAGACAGTGAT
GCTGTTTCCCTCCATATCAAAATTGAGGAATGGGAACGCAATGATTATGA
ATGTAATATTTTATCAGAACCTAACGTCAAACATTACCGATATGCATCTT
TGCGCTCCTCAGATTGTCTCAATgctgtgaaaatgaaaacatttgaatCA
ATGGATGATCTTATAGAAATGATGAACAAAGATATTTGTAAAAGACGAAA
ATTCAATTGAAACATCTTTGTCACCTCTCCAACCTGTTAATAGTGTTAAT
TATTTTGTAGAactcatttgtttttttttattaaaatcattttacctcgg
aggtcctatgaattaaacCGAtttccgtccgtccgttcgcttgtctgtta
ccagcttttttggtttttctgattttttacacaatgatgcaaaatgacaa
tatccAAAATGtgactagtctgaatcgcagacctctattgTGACGGCCGC
TGGCcttgttttgatatgtttcaaTTTCATGTTACGTCATTAGTCACTTG
GGATTGCGTCTCTCGTTGTCTTCAGCGTATTCAATTTTATTGCGTCTTTT
GTATGTCACCTTCGTATTGTTTATAATGTATATAATTAGGTCATTAGGGA
ATTGTAGAATTTTGAGGCGTAGGAATTAAATTGTAAACGAATTTTCTACA
TTTATATAACAGTAGTAATGTTGTGTATGTGATGTGAAgtggtgaaggct
tcttcgtaaaagcgaaagacatgtatctatttttcggatccggcatgcgg
gaatagtgtca

Coding sequence (CDS) from alignment at sc0000096_pilon:333187..334997+

>MSTRG.12624.1.p2 ID=MSTRG.12624.1.p2|Name=MSTRG.12624.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=342bp|location=Sequence derived from alignment at sc0000096_pilon:333187..334997+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTCGTATCTCCTTTTTGGTgacttgttttcttttcatattgATATT
CCATTGCAATACTGATGGGTTTCAGTTTAAAGAATTCGGAATGTTGGTAT
GCTCGAAAAGAAACAATATAACCATTATTGCTGATTCTGTTGATAGCGAG
CTTCTGGATGACCTCTTGCATCGTTTGGAGCCTTTGACACGGAACGAAGA
TTGCTTCACGATCAATCTATACCTCCCGAGTGATGGATTTGTTGTCCAAT
GGCGACCGAACTTCAATGTCAATCAATTGGAATGGAATTTCTATGACAGA
TTCCCCTTTTTTCTTCAAAGGTTATTCCTCACAACGATTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12624MSTRG.12624Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12624.1.p2.exon1MSTRG.12624.1.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12624.1.p2MSTRG.12624.1.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000096_pilongenomesc0000096_pilon:333187..334997 +