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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000096_pilon:204560..211533+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12616.2.p2 ID=MSTRG.12616.2.p2|Name=MSTRG.12616.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6974bp|location=Sequence derived from alignment at sc0000096_pilon:204560..211533+ (Clytia hemisphaerica_ch_hm2_pilon) ATCTCAACGAGGGACAAAACAATCAAATATTCCATCCTTGATGGTATGTG
CTAGAAGGCCTGAAATTTCTATAGAAGCTTTTGATTTTCCATATGCTATA
GGTTTGGTTATTTATGAGAAGAGAATTGACCCAAATcctattttaaaaat
gttgtaACTATAGCTTTGGAATATTTGGCTCTATTTTatgtttattattt
attatagaGTGAATAATACAAGCGGTTTGGGGGCTGTTGAATCAAAGTTA
TACCAAAAAAGTATTGGACAGACTAGACTGAATCTCACTCTAGATTTTTG
TTGCTaaaaactaaatattttttatgcaCAGGATTTAACCTTTGGAAATA
AGGTACAAAATCTGGAAACAACTGAGACCAATCTTGGTGCACGAGTACAA
CCTCCGAAGAAACCTCCAAGTGGTGTACAGCGAAAGAAGACTGGCAAACA
GGCCAAAAGAAGGGAAGCCTTCCAGAAAATTATTAAAGAAGATGTTTCAG
CTCAAATTGATACTAATCAGAAATTGAGAGGAAGAGGGAAAAATGTTCTA
CAAAAAATGGAAGGtgattatttcgatttttgtccCTGAAGAAGCTAAAA
TGCTAGAAAGAAATCCCTAAAAGGGTCCTAAAATCCCCTTTGCCTCGatt
tttgacccaaaatttccagatttttaaAACTCAGGGTCAGGAGGCGCCAA
CGCGTCACCTGGCAAACCCAGTACCCCCaggatttctttctttcttgtaG
GTGCCACAAATGGTCCATTGAGTGTCCTTCACGATTGCATGCAATATGGT
ATCAAAGCGAAAGTTTGGGTCAGGCGTTACAAGGGTTTACGTGGTTGTTT
GACTGGATATATTGCTGCTTTTGACCATCATATGAACCTGGTAAGATTTT
AAAACATAGAGCTCttttttttAGTCCAGGATGTGTAACTCAACACCCCc
tgctacacgcttttttttttataagaatacactttataagaatgtccatg
atgaaaatggccaaaaaattaagaatatggtaagaatatcaccatcatgg
aatttagcaactgaacctaagaatgccattttaaaggcattttaacctgt
agattggcaatttcgatcttaacctaagaataccgtaagaatatttttgg
atgatttttgccaaaaagttaagaatatccatgatgaaatgaaaaaacac
cattcttataaaaaaaaagcgtttaattCCAACCccacttattaagtttt
gagattttttccaagccCACGCTTTTTCTAATACACTGTCTATTAGGTAC
CCGGGAGTACTTATTAACAGGCTATGtatgaattgaaaatttcctttaTG
CTGTCGCATAAAGTTAAGAGAGTGTTGGTTCTGCGACTCGTGCCAAATCT
TAGAAAATGACACTTGGTGTCTCATCTTAATACTAAACGCTTGAAGTTAA
GGTGGGTTCAATGGTAAACTAGGGGAGGAGACGCACTCTTTCCTAATTTG
GGAAGATAGCTAAGGAAAGGAGGGGTTTAAAGGTCGCCCTCGGCTGCGGA
TGGAAACCTTTACTTACAGTTATTATAATTCTAATGCTCGCTCAAcagtc
aaatgaaaatatttttgctgaaaaagcaAATTACCGAATATTTCGAGATA
TGAACCAATCTGGTTACTCATAAAAACTGTtcaacaaaacctttttttgc
cagtttggtttttaacttattttaaaGTGGCTGTACCGCAGAACTTCCTT
AAGTGGATTAACTTCGGCGGGGATTTAATTCCGATTGATCAATTCTGTAA
AAATTGCTGgggattttttaaaatttggcgaattgggaATTTGGTGACAC
TAAAATGGATGAAAGTTACtataaaatatactaaaaaggtTTGATTATTC
ACATAAtgttctttttgttaaatttagcgggaatttaatttggcgagtgg
ccgatttttgagaaattttggccaaatttgatccccgccaaaattaatcc
atttaaagggctctgaccatagtcgaaaaattgattttagtatgtaaaca
taaaagttatgttttaggttctttaacacttggaattgcctttataaatt
gctttttaatcaaatcccttaagagtaattaagaatttaattgcaaaaat
gacgttatgaactttaaaaagacgttaataatatgttgcatcgttgcatc
accttcttttataaaaagtgttgggtaattaacttttttgtttcgaattt
tttttaaaactgtccgcaaagaattgaactgttttacattttttggaaaa
attttctaaattaatgcatcaaaagttatggctgttgaactatgaaaaat
tgggatggaaaacgggtcaaaaagcactattttcaagattttgaagcaaa
taagcttttagaaaaattttccgaagaaatagttttagttcgataaaaga
tacaccatatacagcaaaaaaaaaattcaaaatattttttctttgccgaa
actaagctcttcaaagttgaaatactcttcttcgcaaaagtcttcatttt
cttttctagaactttatattttgtaagtggcaaatattaaaaattcacta
tggtcagagccctttaaGGTATCCGAAATTTTACGATTTTGGCGCGTTTG
ATATTTGAGTAAACTTTTGTTTAGTCATCCGTGAGTACAGTATGTTTATG
TACACATATAGATTTTATCAAAGAGTTTTATGTGTTTTAGGCTTTGATTG
ACGTGGAAGAAGTCTATACATTAGAAACATGGATGGTTGGCGAACCGTTg
aagaaataccaaaaaaaagtcttaaaaaaacgtgaagAAAAGTGTCAACT
AAAATCGTTCGCTGAAACAGCTCAGCCTATCAAACCGTCTACAGGCGCTA
CAAAGAAACCTTGTTCTGGTGGAGGTGTCAAGGATTATCTGAAGAAACTA
ACGCAGTCTTTGCGACAAAATACATCATCTCCTACATTGTTTGCCAACCT
TCACCGAAACTCAGCAATGACAACCAATAAGCCATTAGAACAAGAACGAA
AAATCGTAAGTGGGCCAACAGTCGATAAAAACCCAGACTCCACCATAGAT
AAGGATTCTAATATTGCTGTTAAAACTTCTCACATAGTTAAATCAGCCAA
ACCAGAAATTGTTACTGGTCCACGCTTACACACATCGAATGACACTCTTA
CCAACCGAAACATTGATAAAAGTTCGCAAGAGAATAGAAGTTCCGTTGTT
CTTCAACCTTTAGATGAAGACGCTTCTAACAAATGCCAAAATGTTACCAA
AAACATCTTATCAGATCCGCGGAGTCATAGAAAGGACAAGAATGTCGATA
AACTCGCGAAACAACCTTCAGAAATCGATCCTTCGCAAGAAGCTAAACCT
AATAATGATATATGGTCTGTTTTAAAGGGCATAGACTTTGATTCGTTGAC
GAAAAAAGTTTTAACGGTtaacaaagaaacaaaagttGAGGACAGTGTGA
CAATACCTTCCAACAAGGAAGTTAACTTGGACACTGAAACGGGAAACTCG
AACCTTCAGAAAACATATAAAACAGATTGCTCTAATGAAGCAAATTTAAA
GAATTCAAAAGGgattttccacaaaataccgCTTGAACTTCAAGCAATGG
ATTTTACACGGGGATTGAGCCTGGATCCTCTTCATCCTGATCCGAGGCTA
AGACCAAGAGAAgtgtttaagaaatattctCAGACTTCGAAATTGAAACC
AAAGAAAGATAGTACTACGGAGaaaaaaaaTACTGACATGCCTTTCTCAA
TTCAAGCACACCAATCTAACAAAAAGAAACACATGGAACATTCTAACAAG
CCACAGCtagaagaaaatttaaaagaacgacCGTGTGATACTGAGAAACA
ACTGTCGAACGAGGATAAAGTATCACTTCCAAAGGAAAAACGACCATTAA
AAAGTAAAGGACTTTCATTGGACAAAAAACGACCACTCTGCGAGGAACGA
ACTTCTACCAAGGAGCAACGAGTACTTGATGACAAACGACCGAACGAACA
AGGAACTCTAGATAAATCGAAGTCATTCATTGATAAGACACCTttagaag
aaaaacaacaaactttagaagatggaaaacaaaaagtagaaaatgatGAA
CCACTTCATCCCAAGGGATTGTTCGAACAATCGAGAATAGCTATAGAACG
TAGTATTAAACCATCCGTAACAACTCAAAAATTACCCGACGATAGAACAT
TGCAACCTGAGGAAACGAGAACATTGCAACCTAAGGAAACGAGAACATTG
CAACTTGAGAAACCTGAACGACGAGCCAACAAACAAAAACTGCAACCAGT
CAAACTAATCAAAGCATCCTTCGATAGTAAAGAACTTCTCGATATTCCTT
TACCTTCGAAACTCGATTTGAGCCTATTTTCTGATGACTCTCAAGAATCA
CGTGTTGAAAATGAAGTTATTCTATTGGACAAATCTCATGATGTGACCAA
TGAAAACCCAGCAAAAATGACATCTGATCAAAAAGAAACAATTCTACTGG
TTAAACCGCTTAAAACGTCCAGTGAAAGTGTATTAAAGGAACCATGTGAA
AACAAATCGATATTAACGACAGAATTGGTCGAGTCTCAAAAGGTTATCAA
TGAAAAAATTGATACGAGACCACTTGATCAAAAGGACACATTTCCATTGG
ACAAGCCACAGAAAACGACCAATGACGTTGAAGATGTGACATCACGTGAT
CCAAAACAAGAAGTTTCATTGGTTAGTCCAGCAGTCGAGAAGGATGAGAA
CAGAAACTTACTACAGCTAGGTATCACATTCGTTGTCGAATTCGTTATCA
ATacatttaaaggaagaaatttttgcggaaaaaaGTCTGGTGGATTTGGC
GGACTTAGCTGAAATCTGCTAAATTAAGATCCcgccaaaatttacttttt
gcgCTATCCGCCTAATAGAATTTCTGAAAAATGTCCATGCATTCACGaaa
tttgtgctatttcaggcttaAAAGAGGTTCATTAAACGCGTTTTGTGTGG
CCAaaaatttccatcaaatttaCTTTGTCCAGTCATTCGGCAAATgaaat
tcccaccaaaatttcttcatttaaaGTAATAGATTTCAACATGAGAATAT
TAATAGCGACCTCAGTTTCTTTACAACTGTTTTTTACAGCCTAATGAATC
AAGTCCATGCGAAAACACTTTTACTGCATAATCTTAAATTCTCAAAACGG
GCTTTTTACTTCCATTACTGCTAATTTTCCGCTACTTTacgaatttgata
aaaaataccctttaaaaggcaaaatgtgaaaatgaaaatttttgacattg
gGAAATCTCACAGCACAGATGTAGCCATCTCCTTGCCTCGTGGTTAACCT
CGCCAataattcttacttttttaactAAATTTGCTTTACTACAGGGGTTG
GCAGTGACGtatgataagattttttaaagtttttatactGATCAAGAGCA
TTTTTGTGGATTTCCAATAATTCCAATTCTCATATCTCACACCACCTTGC
TGGACAAGAGAGGAAGGGGGTTAAATATTATTGCTGTATTCTTGTTTTGT
CTTTAGATTTGTCAGGCGATAAACCTCCTTTATTAAACCAAGAAGACTCA
AAGGAAACCACCCAAATTaaaaaaccgaaaaagaaaaagaagaaatcgaa
aaagaaTCGACTCTCCTCCGAAAGCATTCAAAATATTCTCGATTCCGTCC
ATAACAAAAGTACTGAAGAAGGAAAAGAAACAAGCCCGTCTATCGAGAAA
ACCGAATTAACTCGAAATGATCTAGATCACAAACTTGAGGAAAAATCTAA
GCATATTGAATCTGAAAATCAAATGGATGTACCGCCATCAATTGAAAACA
CTGAAAAGATCATTGGTCCGATTCAAAATGATACCTGCCAAAAACTTAAA
CTTGAGAGAGAATCTACACTTGACAAATCTAAAGATCGAATCGATAGCCC
ATCATCCATAAAGAGCactgaaaacatttcaaatcgacctcaaagtaaaa
tcggtccagaaatcaaaatcgaaagcgaaaaaatTAAACTGCAAGAGGTA
ATCAATATTCCATTATCTATTGATAAGACTGAAAGCGATCATGGTGAGCC
TAAAAAAGCATCTATCCCTCCAAGGACAATATTTCAAGAGAATTCCAACG
AAATTGACGTCAAAGATTCTACAGAGCTACAACAAGAGAATCCAAAAGAT
TCGTCATCAAAAGTCAGCAAGACACATTGTAAATTCTTATTCCATTCAAT
CGCAAATCGCCTGAAAAGcttgaatgaaaaagaaaaatcaatatctgGTC
TGGAGAATAGACAATTAAGATCAGATATTCAGAAGCTCACTCCGGAGTAT
GAGATAAAAAGATCGACTTCCCCTGATCAAACATTCGTTTCTCCTGTCAA
AAAACCATCAAGGAATACTATTGGCCAGCATCAGTCACGTGACAAAATTC
AAGAACCTGGATTAGTTGGACTCGCATCAACACCAAACACGATTGGTCAA
GGCTGGGCATGTGACACTTCTAAACCAATGGATTTACAGTTTAGCCAGTC
ATCATCGAGTCAGATTGGTCAGGAGAGAACACGTGACCAATGTGAACCAA
TAGAATCACATCATACTGGAAAATCGTCAAATCTGATTGGTGGAGAGAGG
TCACGTGACGAAGATGACTCCCTCTCATTTGAGCATTCTTATGAAGCAGC
AAATACGCTTCTACTTCTTGCAACCAGTAGACCAGGCTCGCCTTCAGATA
gcgatgaaaattttgattccgAGAATGAAAGTTTCAACTCCGAACACGGA
AACCTCAAAGATAAACATGTAAACGAAACTGAGGTTTTCGATCAATCTAC
AGTGCCACGTGATCAAAAGGAAGCTTTTTTATTGGACGATTctcaaatca
aatttgaaagcAACGAGAACCAAA Coding sequence (CDS) from alignment at sc0000096_pilon:204560..211533+ >MSTRG.12616.2.p2 ID=MSTRG.12616.2.p2|Name=MSTRG.12616.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4455bp|location=Sequence derived from alignment at sc0000096_pilon:204560..211533+ (Clytia hemisphaerica_ch_hm2_pilon) TCTCAACGAGGGACAAAACAATCAAATATTCCATCCTTGATGGATTTAAC CTTTGGAAATAAGGTACAAAATCTGGAAACAACTGAGACCAATCTTGGTG CACGAGTACAACCTCCGAAGAAACCTCCAAGTGGTGTACAGCGAAAGAAG ACTGGCAAACAGGCCAAAAGAAGGGAAGCCTTCCAGAAAATTATTAAAGA AGATGTTTCAGCTCAAATTGATACTAATCAGAAATTGAGAGGAAGAGGGA AAAATGTTCTACAAAAAATGGAAGGTGCCACAAATGGTCCATTGAGTGTC CTTCACGATTGCATGCAATATGGTATCAAAGCGAAAGTTTGGGTCAGGCG TTACAAGGGTTTACGTGGTTGTTTGACTGGATATATTGCTGCTTTTGACC ATCATATGAACCTGGCTTTGATTGACGTGGAAGAAGTCTATACATTAGAA ACATGGATGGTTGGCGAACCGTTgaagaaataccaaaaaaaagtcttaaa aaaacgtgaagAAAAGTGTCAACTAAAATCGTTCGCTGAAACAGCTCAGC CTATCAAACCGTCTACAGGCGCTACAAAGAAACCTTGTTCTGGTGGAGGT GTCAAGGATTATCTGAAGAAACTAACGCAGTCTTTGCGACAAAATACATC ATCTCCTACATTGTTTGCCAACCTTCACCGAAACTCAGCAATGACAACCA ATAAGCCATTAGAACAAGAACGAAAAATCATGAAGACGCTTCTAACAAAT GCCAAAATGTTACCAAAAACATCTTATCAGATCCGCGGAGTCATAGAAAG GACAAGAATGTCGATAAACTCGCGAAACAACCTTCAGAAATCGATCCTTC GCAAGAAGCTAAACCTAATAATGATATATGGTCTGTTTTAATCTCAACGA GGGACAAAACAATCAAATATTCCATCCTTGATGGATTTAACCTTTGGAAA TAAGGTACAAAATCTGGAAACAACTGAGACCAATCTTGGTGCACGAGTAC AACCTCCGAAGAAACCTCCAAGTGGTGTACAGCGAAAGAAGACTGGCAAA CAGGCCAAAAGAAGGGAAGCCTTCCAGAAAATTATTAAAGAAGATGTTTC AGCTCAAATTGATACTAATCAGAAATTGAGAGGAAGAGGGAAAAATGTTC TACAAAAAATGGAAGGTGCCACAAATGGTCCATTGAGTGTCCTTCACGAT TGCATGCAATATGGTATCAAAGCGAAAGTTTGGGTCAGGCGTTACAAGGG TTTACGTGGTTGTTTGACTGGATATATTGCTGCTTTTGACCATCATATGA ACCTGGCTTTGATTGACGTGGAAGAAGTCTATACATTAGAAACATGGATG GTTGGCGAACCGTTgaagaaataccaaaaaaaagtcttaaaaaaacgtga agAAAAGTGTCAACTAAAATCGTTCGCTGAAACAGCTCAGCCTATCAAAC CGTCTACAGGCGCTACAAAGAAACCTTGTTCTGGTGGAGGTGTCAAGGAT TATCTGAAGAAACTAACGCAGTCTTTGCGACAAAATACATCATCTCCTAC ATTGTTTGCCAACCTTCACCGAAACTCAGCAATGACAACCAATAAGCCAT TAGAACAAGAACGAAAAATCATGAAGACGCTTCTAACAAATGCCAAAATG TTACCAAAAACATCTTATCAGATCCGCGGAGTCATAGAAAGGACAAGAAT GTCGATAAACTCGCGAAACAACCTTCAGAAATCGATCCTTCGCAAGAAGC TAAACCTAATAATGATATATGGTCTGTTTTAATCTCAACGAGGGACAAAA CAATCAAATATTCCATCCTTGATGGATTTAACCTTTGGAAATAAGGTACA AAATCTGGAAACAACTGAGACCAATCTTGGTGCACGAGTACAACCTCCGA AGAAACCTCCAAGTGGTGTACAGCGAAAGAAGACTGGCAAACAGGCCAAA AGAAGGGAAGCCTTCCAGAAAATTATTAAAGAAGATGTTTCAGCTCAAAT TGATACTAATCAGAAATTGAGAGGAAGAGGGAAAAATGTTCTACAAAAAA TGGAAGGTGCCACAAATGGTCCATTGAGTGTCCTTCACGATTGCATGCAA TATGGTATCAAAGCGAAAGTTTGGGTCAGGCGTTACAAGGGTTTACGTGG TTGTTTGACTGGATATATTGCTGCTTTTGACCATCATATGAACCTGGCTT TGATTGACGTGGAAGAAGTCTATACATTAGAAACATGGATGGTTGGCGAA CCGTTgaagaaataccaaaaaaaagtcttaaaaaaacgtgaagAAAAGTG TCAACTAAAATCGTTCGCTGAAACAGCTCAGCCTATCAAACCGTCTACAG GCGCTACAAAGAAACCTTGTTCTGGTGGAGGTGTCAAGGATTATCTGAAG AAACTAACGCAGTCTTTGCGACAAAATACATCATCTCCTACATTGTTTGC CAACCTTCACCGAAACTCAGCAATGACAACCAATAAGCCATTAGAACAAG AACGAAAAATCATGAAGACGCTTCTAACAAATGCCAAAATGTTACCAAAA ACATCTTATCAGATCCGCGGAGTCATAGAAAGGACAAGAATGTCGATAAA CTCGCGAAACAACCTTCAGAAATCGATCCTTCGCAAGAAGCTAAACCTAA TAATGATATATGGTCTGTTTTAATCTCAACGAGGGACAAAACAATCAAAT ATTCCATCCTTGATGGATTTAACCTTTGGAAATAAGGTACAAAATCTGGA AACAACTGAGACCAATCTTGGTGCACGAGTACAACCTCCGAAGAAACCTC CAAGTGGTGTACAGCGAAAGAAGACTGGCAAACAGGCCAAAAGAAGGGAA GCCTTCCAGAAAATTATTAAAGAAGATGTTTCAGCTCAAATTGATACTAA TCAGAAATTGAGAGGAAGAGGGAAAAATGTTCTACAAAAAATGGAAGGTG CCACAAATGGTCCATTGAGTGTCCTTCACGATTGCATGCAATATGGTATC AAAGCGAAAGTTTGGGTCAGGCGTTACAAGGGTTTACGTGGTTGTTTGAC TGGATATATTGCTGCTTTTGACCATCATATGAACCTGGCTTTGATTGACG TGGAAGAAGTCTATACATTAGAAACATGGATGGTTGGCGAACCGTTgaag aaataccaaaaaaaagtcttaaaaaaacgtgaagAAAAGTGTCAACTAAA ATCGTTCGCTGAAACAGCTCAGCCTATCAAACCGTCTACAGGCGCTACAA AGAAACCTTGTTCTGGTGGAGGTGTCAAGGATTATCTGAAGAAACTAACG CAGTCTTTGCGACAAAATACATCATCTCCTACATTGTTTGCCAACCTTCA CCGAAACTCAGCAATGACAACCAATAAGCCATTAGAACAAGAACGAAAAA TCATGAAGACGCTTCTAACAAATGCCAAAATGTTACCAAAAACATCTTAT CAGATCCGCGGAGTCATAGAAAGGACAAGAATGTCGATAAACTCGCGAAA CAACCTTCAGAAATCGATCCTTCGCAAGAAGCTAAACCTAATAATGATAT ATGGTCTGTTTTAATCTCAACGAGGGACAAAACAATCAAATATTCCATCC TTGATGGATTTAACCTTTGGAAATAAGGTACAAAATCTGGAAACAACTGA GACCAATCTTGGTGCACGAGTACAACCTCCGAAGAAACCTCCAAGTGGTG TACAGCGAAAGAAGACTGGCAAACAGGCCAAAAGAAGGGAAGCCTTCCAG AAAATTATTAAAGAAGATGTTTCAGCTCAAATTGATACTAATCAGAAATT GAGAGGAAGAGGGAAAAATGTTCTACAAAAAATGGAAGGTGCCACAAATG GTCCATTGAGTGTCCTTCACGATTGCATGCAATATGGTATCAAAGCGAAA GTTTGGGTCAGGCGTTACAAGGGTTTACGTGGTTGTTTGACTGGATATAT TGCTGCTTTTGACCATCATATGAACCTGGCTTTGATTGACGTGGAAGAAG TCTATACATTAGAAACATGGATGGTTGGCGAACCGTTgaagaaataccaa aaaaaagtcttaaaaaaacgtgaagAAAAGTGTCAACTAAAATCGTTCGC TGAAACAGCTCAGCCTATCAAACCGTCTACAGGCGCTACAAAGAAACCTT GTTCTGGTGGAGGTGTCAAGGATTATCTGAAGAAACTAACGCAGTCTTTG CGACAAAATACATCATCTCCTACATTGTTTGCCAACCTTCACCGAAACTC AGCAATGACAACCAATAAGCCATTAGAACAAGAACGAAAAATCATGAAGA CGCTTCTAACAAATGCCAAAATGTTACCAAAAACATCTTATCAGATCCGC GGAGTCATAGAAAGGACAAGAATGTCGATAAACTCGCGAAACAACCTTCA GAAATCGATCCTTCGCAAGAAGCTAAACCTAATAATGATATATGGTCTGT TTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000096_pilon | genome | sc0000096_pilon:204560..211533 + |
|