|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000095_pilon:902500..906799+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12578.1.p1 ID=MSTRG.12578.1.p1|Name=MSTRG.12578.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4300bp|location=Sequence derived from alignment at sc0000095_pilon:902500..906799+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGACTGCTGGTAGTTCagcttatttttatcatttgtgTTGTTTGTTCTC
TCTCTGGCTGGTGGATTGATTCTTcagaccaatcaaattttgttgcaACT
TTTGTTTGGTTAGGTATAGATATACAGTATTtatcaaggacacttgtata
gcgtagctacgctatacaagtgtccttggtaTTTATGCAATATGTTATAA
TTATATCCATATGGTTGTTAGATCTATATGGCCTTATATGAATATAATGT
TCGTTTTATGTCCTCTGTATCAAAATTTGAGTTGAGTTGAGTAAAGTAGA
CGAGaaggcactttcgatttcaagcgcAACTTTTTGACGTCTCCATGGAA
ACTTTGAATCTCTGCTGAAAAGGGTCTGGATCGGTTGATGGATTTTGGTT
GACAAcaaataggccatttcacactcgaaatgaatcatgggtaatcagga
ctggttgcgctctagtaacgacttccggttggctagacgcaaaaatcttt
aaattttttcaaaactttggaccaataataAGTCGTCATCAGCGCGCAGT
ggccctgattacccattacgctttgcgactgtgaaatggcatcatccagt
ctatcaaaaaaccTTAAGTGGTCTCCAGGCTAGGTGTAATCGCGCTAAGA
CTCTTTCTACACTTGATCGATTATACACGCATAGTAAGCGAGACAAAAAT
TGGTGttatgaaaactaaaaaaaaagttggtactataaaaaaaagttgat
attataataaaaagagttggtattataaaaaaaagttggtattataaaaa
aaaagttggtattataaaaaaaaagttgatattataaaaaaaagttggta
ttataaaaaaaagttggtattataaaaaaaagttagtattaaaaagcctt
ttggcgcgccatagtatctcatctttgttgtttggaattgcttgtagttt
tattgttatttggatttttaaaattttctcttaAAATGGtgacctcgcca
aacgctcctagtctactttaCTGGACTCAGaatcagcgtcataaaaaatt
atcaaaaagcaaagttcagccaaaagtacaAGAGCAGCCAACGGCTAGAA
AACACAAAATAACTGTTCAGTTCAGAAGCGTTCCCAATTCGGGCTCCTGG
ATAAATGCATGTGTTTTATACAAATTGATCCtggaaaaaagtaattttgt
tcTCTTTTTGTTTCCCAAAATGTTCTTACTGGAAAAATATATGTTCTTTT
TCATGATTACTCCTGGATTTTGCTAACACAACAGAGTTCtgctggaaaat
ttgatgtgttcttttttttcaaacgcTCCTGGATTTTCCGAACagttatt
ttaatgaaattggtGCCTgtccttttgataaaattcacaTCCTCCTAGAT
TTTCATGTCTGTTCGCTAAGCAAATTGTTCCTGGATTTTCTCCTTAAAat
ctctctcctggaaaaatagtACAGACATTTGACAAATATCCGTCGTTGGC
TGCTCTtgaaagtagactctagtctatgtAGATTGTAGCATCAGAGGGTG
GTGGGAGGGTAGTAGAGTGAGGGGAAGAGGGCGGAACCTAAATCATACAA
CACAAACCTCCCGCCCAAAACATTTATCACCACAGGCTTCTTTGTTTGGT
GAAGAACGATTGAcccagaggggggggggtaattatGCAAAATAATGGGG
TGCCTGGTATGTGTGAGCCATAAGGGTATCTCTTTCaacaccctcgaaag
tccctcaaCGGGGTACAAAAACGATTTCGACGAAAAGTTAGATATTGCGA
tttttttaccgtgaaaagcacaggccgaaatcatatatcgacgctgtgcc
gaccaatccagattctattcagcgcgcaaccaacgcagagaaaagtaacc
atggcgaccatccaagatcttggattaagttcaaagttgatacttttatt
cccgtcgtagaaaacacaactcaataatgaaatcaatgctttttaaaagg
ggtctgtctattatttcgattcaattaaaataaaatagcaTTTCCATGAT
TAATAGTTTAGTCGTTACTGTTTTACTGTTAGTGTTACATTTATgggaat
catgtaaaagatttctttcgaaagaaactcatttcaattacacctTCTAG
GTTTCtagggaattcgtaaatagtaaactgcatactgatgtgatacagtc
tgctagacattaatatgataatatttactcttcatctttaattctttcta
cagtgattagattgacacatgcgcgataaaatttcaataattGGTCTTCA
taggttgaaatattctttgaaaactcaaccacAGGGTAGCGATTTTTACG
TCCCGTAAATCGTTTAGAGGGATGCAAAATGCGGGAAAAtatgtacctta
tcggccaaaacttagtcggccttcattgttagtcggccttaatgttatca
cctcgtcaaaatttagtcactaagggccgactaataattaaagaccgact
aagttttggccgataaggtgtGCGCAGAGTTTACAGACAACCGGCAGTTT
AaagggaaaaaagtggcggtagattTTGGAACATAACAAACATTGTAAAC
gcctccgccactgcttacttcGCCCTGGGATAaccaccattttcaaattt
atactCCGCCTCCTAACTTCTATTTTTAGGGATCAGTCTCTCTTAACTGA
TAaatacccgtcatctcgcacACATAGTAGTACCCACAGATTtattaagc
ccgaagggctagatgtcgtgctttaagccatcgcaggcaaaaaaagtgaa
tatcgcaaggAATATagttacttttgttttcgaaaatccgcaaagcttct
gattggttaaagatttggtttttataaaaagagaggaaagaggaaaagaa
aaatatctctTTGCCTATATCAGCAcaacaatagacagacactgtcctga
tatgaaacatgtgtctgatatgaacgGGAAAACCCTTatgtaagaaaaaa
cttttaaccactgaaattttattgtaaggtcacgtgacctaggtaggatt
tcctacctagccacgacacacttttcagcaaaagtgcGACATATAGCcct
tgggctttataaatctgtggtaGTACTCCCCTGAACTTTCCTCAGATAtt
agagaatttaaaaaaagggagTCTTAAGGATTGTATTGCTATAAAACCTG
GTGTAGAAACTGGTTCTCGGCAAACTCGAAACAAAAAACTAACTTTAATT
CGTGACTGGCAATGATGTCATTTGCTCTTTTCGTTATTAAAATATGTAGC
TAATTACTCTATTAACGACGCTACATACGGAAGTAGCAAGTTAGCTACCA
GTTTCCTGGTAAGGATATAAGCTCGTTTGCTTTGTAAGGAACTGGGAACG
AAATTATGTTAAATAGCCATGAGAAGAGTAATTACGCTAAATCGTCAGTT
TCGCTAAGCAATTTACGACTTGATAATATAAAGTGTTGTAGTATTTCGCA
CTCAATTATCATTCAACAGCTTAAAGAGTGGAAATAAGAGCAGAATTGAA
AACGTTACGAAGATGAGGTTACTTTTGGCTTTGTCAGTCCTTTGCTTGCT
TGTTTTGATACAAGGAGGTGATTGTAAGAAAAAGGAAGGCGAGAAAAATA
ACGAAGTCGAAAGCAAGAAAGATGCAGCCCACTTTCATCACTACAAAAAG
GTAATATTAATAACTGTGGCCAATAGTGATCAATCAATTAATATTGTTCG
ACCGACAGCAATTAATTATGCCTCGCCCCATGAGCGACCAGATCTTTTTT
ACTGTATGACTATGAGATCAAGTAAGTTCAAATAACGCAAAATGAAGTGA
TAGAAATAGGGGATGATGTCTGATATACCTCAATTTTGcctgaaaaaaag
aacagtttACGCGAAGAATTTGAGTCTCAAAGTGTCAACAAGCCgagccg
agcctcaacaaaaacaAGGTTCCAAGGAGGTACTACCCTGTGCTTCCATA
CTCAGACGATAAAACTCtaacttcTttttccTTttttttatagaaACATA
TCCCGCGAAAAGCCATGTTCGTTTGCAGACGATTTGCCAACTGTCCAGGA
CCTCGACTGCCACTCAGAATACGAAATTCTGATCGATTCTCATGCTGTTT
AGGCTGTGTACAGAAGAGAAATAAGAAGAACAGATTGGTTTTCAGTGCCA
GAGCTGAAAGCTTCGACTGTCTTTGCAAATGTCCTGCCTGTGCACAACTT
AGAGGTTGACTCTACCAAACCTGTAACCTAATAATGATTTTgaatcaaga
Coding sequence (CDS) from alignment at sc0000095_pilon:902500..906799+ >MSTRG.12578.1.p1 ID=MSTRG.12578.1.p1|Name=MSTRG.12578.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=708bp|location=Sequence derived from alignment at sc0000095_pilon:902500..906799+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGTTACTTTTGGCTTTGTCAGTCCTTTGCTTGCTTGTTTTGATACA
AGGAGGTGATTGTAAGAAAAAGGAAGGCGAGAAAAATAACGAAGTCGAAA
GCAAGAAAGATGCAGCCCACTTTCATCACTACAAAAAGaaACATATCCCG
CGAAAAGCCATGTTCGTTTGCAGACGATTTGCCAACTGTCCAGGACCTCG
ACTGCCACTCAGAATACGAAATTCTGATCGATTCTCATGCTGTTTAGGCT
GTGTACAGAAGAGAAATAAGAAGAACAGATTGGTTTTCAGTGCCAGAGCT
GAAAGCTTCGACTGTCTTTGCAAATGTCCTGCCTGTGCACAACTTAGAGG
TTGAATGAGGTTACTTTTGGCTTTGTCAGTCCTTTGCTTGCTTGTTTTGA
TACAAGGAGGTGATTGTAAGAAAAAGGAAGGCGAGAAAAATAACGAAGTC
GAAAGCAAGAAAGATGCAGCCCACTTTCATCACTACAAAAAGaaACATAT
CCCGCGAAAAGCCATGTTCGTTTGCAGACGATTTGCCAACTGTCCAGGAC
CTCGACTGCCACTCAGAATACGAAATTCTGATCGATTCTCATGCTGTTTA
GGCTGTGTACAGAAGAGAAATAAGAAGAACAGATTGGTTTTCAGTGCCAG
AGCTGAAAGCTTCGACTGTCTTTGCAAATGTCCTGCCTGTGCACAACTTA
GAGGTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000095_pilon | genome | sc0000095_pilon:902500..906799 + |
|
