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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000095_pilon:888426..892092- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12576.3.p1 ID=MSTRG.12576.3.p1|Name=MSTRG.12576.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3667bp|location=Sequence derived from alignment at sc0000095_pilon:888426..892092- (Clytia hemisphaerica_ch_hm2_pilon)
TTAAAAACATTTTATTTAGTTTCTCCCTTAGTGTTATTATCATTGGAAGG
TTATAGACAATGGGTAAAGAAAATGTTATTGAAAAGAATTGTGAATCATC
ATATATTAGGTACCAGTACATCTTTTGCACCCACTTTTCAAATTGAACAA
CATATGGTAACTATATAAGTTTTGATTTAAATTTAAAACGAATTTATATT
TGATCAATAAAATATATTCATCAAAATTCCCTCTAAAGATAAAAAAACAT
GTCCATGTCCTGTCCATTCGTTATCTCGCCTTTTAAGATGTGGTCTTCAG
AAACACGTTTCACTTAATTTACTAAGAAGCTTAAAGACTAATTTGACATT
GATTTTACTTGACATGAATTATATTTTATACTTATCTTGTAAGTTATATT
CTAAATTTCGTATGATATTTTACGAATTTACATGCATAACGTTTATAAAC
AAATGCAGGCTAGGTTTTTGGTACCCAAACAATGGCTCTATTGTTTGAGA
ACAATAGAATGCTAATTATAATGTGAGCCTGATAGACACTTGGTATGACA
CCTGGTATGACTACCTATGGTAGACACTTGCTTATAAAAATTTTGACAAT
TTAACTCGTTAATTTGTATTATCATTTCAGCATTGCATCTCTGGATCAGT
GGAATCATTGCTGTAAGAATTTGAATATTTTTACTTTAATTTGATTTCAC
ACATAATTTTTAACTTTCTGAAAATTTAAACTCGTAAGTTCTTCTTTTTC
AACTCGAAGCTGATGAAAAAAATCCTTGAAATTTTTTAAAGTTTTACACA
TAAGCCCAATTTGAATTTGTGGGGCTATCTCATTGGACGAAACAAACTTT
ATTATTGAGAATTCGAGTGAAAGTCGGCATGTGTGTCAGTGTCTTTTTTT
TTGCTCGAATTAAATTTGTTTTTCTTATCAGGTCACTTGGAACGATTTTT
TGAGAGAAAATAATGTCTATGTAGATTGGCAAAGAGACGTCACAAATCAT
CAAGGTTTGTTCTCCAAATTATCTTCATATACGATCTATCTCTATTATCG
AGTCATGAGTATTTCCTTGTCTAAATTACGTGCTTTCTGTGAACGAGTCT
ACCTATTAATCATATGTTTTCGTAAGCCTAGCGTCACTCTAATTAGAGCT
TGATTCTCAGAAACTGGCTCAAAGTTTTACTTTTTTAGCCCACTCGCTGT
TTTTTTGTAATTTGCTTTTTGTGCAAACTTTTTCTAGAAGTAACGACGTC
ATCAACCCCCCATACTCTCTTTCCCTGCCTCTCTTCCTTGTGGTTGTCGT
TTGTACGTTCAACAGATCTTTCTAAAAATTGTTTTTGTTTCTCCAAGGGA
AGGGCAGGTGGTTGAGGAGCTAAAAGTGTGGTATGCAAAGAACTTGCAGA
GGATTTAAGTTTCATTATAACCTTTCATCGTTTTTAATTAGCCTTTAGAA
TGTTTGTGGGTTGTTTGAATCAAATTATGAAATATAAGCATTTTTTTTGT
TCATTTTAAAACATACCAGCATGTCATGGTCACTATAGATTAATTTGCAG
TGTCATTGTATGCCAAAAGTTTAGCGATATAGTACACCCTCTGGCCACTG
CCGGCTATTTACACAGATATACCAATACACTTTTTGACTTTGATAGCTTG
CCTAACCTTAACCAGCTTGATTTCAAACAAACGGGAAAAAAAGTTTCCTT
CTCTACTCAAATTTAAAGTAAACAGAGAAAAAACCTTGATTTCTTCTAAA
ATTTCATCTACATGTTTCTAGTATAACTTTTAGGTGTCCTAAGTTCTGTA
GAATTTCCAAATTTTATTTTTCATATAATAAACCTCATAACCCTCCAAAA
GGGTTACTGTTCGTTTTCGTCTGGCCTCTTATAAGAACTTTAATATATTT
CCTGTCTTTTTATATATAGAATCATTTCGATGTTATCCGTCCGAATCTCT
GGTTGAAATCAATAAAGAGAGAACTGATGTTCTTCCTAGCTATATCAAGA
TGAAAACAGATTGCACATCCTGTTGCTTGAACTCCCTGTTTGAATGTGTA
GCTCCAAGAAAAATCATGAAGATGAAGAAATTTAAACAGTTTTCAACGAA
ACGTAAGTCTAAGAATTACTTTGTATATTAACTTTCAAAGGATAGTTAAT
GCTCTTTCCTAGAAAAACCTGACACGCCTTCTGTTGAAGTTACCTCTTAA
ATCATAATCCGATAGATTTTAAATCCCAGGATTTTAAACATTTACTTTGC
AATTCCTTGATCTCGTTAAAACCACTTGACAATTTACAGTGACACCCTGT
AATCGTACTTCGGGCCCTGCTAAAAAAATTATGTAAGGTTTTTAATCTAA
TGGACGAGAAGGTTTTTAATATTGACTGTCTTTGATATCAATCACATCAA
TAATATCAATTTCAAGGACGTGTCCCTATCGAACTAATCTTGATCATTTT
AAGTACTAATAAAAGGATTTCCTACTGGTAGAACACTGCTTACCAAAAAA
CAATTTCCGCCCCTAACACCCTCTAATAATTACAGCCCAAAACATTCTTT
AGATTTTGGAAAGTGCTTTAATGCTTCCAAAATCTTTCCTGGATCCACGA
TCTACAAAATTATTTATTCTTTCGGAAATTGACACCCCTTTGCTATTAGG
ATTATTTGTCACTAAAAGAAATAAACAAAGATTCGTCAAAATTTGTATAG
AAGGCCCTCGTTATTAATCCGCATTTACGTGATCGGAAAACAAACCACGT
GCAGGTTTAAACGGGTCTGCAAAATTTGTACAAGGTGCTACCTATTAGTC
ATTGCCTCATGTTTTGACTCTTGTCGATAATGTCACAAATATGATTTGTT
GAAGCGTCGAAAAGATAATTTCAAGCAAGATGTTGATACTTAATACATAT
CATAGTCCGATTAAATTTAATATTCTTTTCGTTAAAATATTTGACACAAC
TAAATGTCATCCAAATTTCAAACTTAGTTGCTGATTTTGTTTCGGTGTGT
CACCCAATATTTATTAATTAAACCCTACAGTTATCTCTTAGCCAAACTTT
TGAATAGAAATTCCGCACATAATAATTTTAGTACATGTCCCGGGTTTAGG
TAGTTTCAGTGAGACGAGGGTGTCTAGATGAAGGGCTAGCAATTAAGTAA
TTTATTAAATTTATACTTGGTAGCACTTGTACTTTTACTGAAAACTCGAA
AAAGCCAAAGTCAATCTAAATCCTACCAAAATTTTAGCCCTTCTTATATA
TCACATGGTTATGCTCTTTTTTTGTGAGTCAGAGGGTTTGACGTGGTATC
AAAATTACTAATTTTTCCTTTTATTCTATTTTCAGACGTGTATTTGGGCG
AAAGTCAGCATGCAGTATTTGAAGTGGATAAATGTATATGTAGATGTCGG
ATAACATCAAATGATTGCCCTCCAGGGACGCGCTTTGAAAAAGAGAGCTG
CGCATGTATCGATCCCGTCAAATTTCCAACAGGCTTTGAATGCTGACGAA
GAAGAGAATGGGGACGACAATTTTTTCATAGATAAGGAAACTCGTTACCA
TTATTTTTAGAAAGGACATTAAACCTTATTACAATTATTCTTAATGGTAG
TTAATTAATTGTTTTAATATTATTATTTAAAGGATGTATCTATATATTGA
TGTAGTAGTCTTTAAAG Coding sequence (CDS) from alignment at sc0000095_pilon:888426..892092- >MSTRG.12576.3.p1 ID=MSTRG.12576.3.p1|Name=MSTRG.12576.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2430bp|location=Sequence derived from alignment at sc0000095_pilon:888426..892092- (Clytia hemisphaerica_ch_hm2_pilon)
ACGTGTATTTGGGCGAAAGTCAGCATGCAGTATTTGAAGTGGATAAATGT
ATATGTAGATGTCGGATAACATCAAATGATTGCCCTCCAGGGACGCGCTT
TGAAAAAGAGAGCTGCGCATGTATCGATCCCGTCAAATTTCCAACAGGCT
TTGAATGCTGAAATCATTTCGATGTTATCCGTCCGAATCTCTGGTTGAAA
TCAATAAAGAGAGAACTGATGTTCTTCCTAGCTATATCAAGATGAAAACA
GATTGCACATCCTGTTGCTTGAACTCCCTGTTTGAATGTGTAGCTCCAAG
AAAAATCATGAAGATGAAGAAATTTAAACAGTTTTCAACGAAACGTCACT
TGGAACGATTTTTTGAGAGAAAATAATGTCTATGTAGATTGGCAAAGAGA
CGTCACAAATCATCAAGCATTGCATCTCTGGATCAGTGGAATCATTGCTA
TGTTATTGAAAAGAATTGTGAATCATCATATATTAGACGTGTATTTGGGC
GAAAGTCAGCATGCAGTATTTGAAGTGGATAAATGTATATGTAGATGTCG
GATAACATCAAATGATTGCCCTCCAGGGACGCGCTTTGAAAAAGAGAGCT
GCGCATGTATCGATCCCGTCAAATTTCCAACAGGCTTTGAATGCTGAAAT
CATTTCGATGTTATCCGTCCGAATCTCTGGTTGAAATCAATAAAGAGAGA
ACTGATGTTCTTCCTAGCTATATCAAGATGAAAACAGATTGCACATCCTG
TTGCTTGAACTCCCTGTTTGAATGTGTAGCTCCAAGAAAAATCATGAAGA
TGAAGAAATTTAAACAGTTTTCAACGAAACGTCACTTGGAACGATTTTTT
GAGAGAAAATAATGTCTATGTAGATTGGCAAAGAGACGTCACAAATCATC
AAGCATTGCATCTCTGGATCAGTGGAATCATTGCTATGTTATTGAAAAGA
ATTGTGAATCATCATATATTAGACGTGTATTTGGGCGAAAGTCAGCATGC
AGTATTTGAAGTGGATAAATGTATATGTAGATGTCGGATAACATCAAATG
ATTGCCCTCCAGGGACGCGCTTTGAAAAAGAGAGCTGCGCATGTATCGAT
CCCGTCAAATTTCCAACAGGCTTTGAATGCTGAAATCATTTCGATGTTAT
CCGTCCGAATCTCTGGTTGAAATCAATAAAGAGAGAACTGATGTTCTTCC
TAGCTATATCAAGATGAAAACAGATTGCACATCCTGTTGCTTGAACTCCC
TGTTTGAATGTGTAGCTCCAAGAAAAATCATGAAGATGAAGAAATTTAAA
CAGTTTTCAACGAAACGTCACTTGGAACGATTTTTTGAGAGAAAATAATG
TCTATGTAGATTGGCAAAGAGACGTCACAAATCATCAAGCATTGCATCTC
TGGATCAGTGGAATCATTGCTATGTTATTGAAAAGAATTGTGAATCATCA
TATATTAGACGTGTATTTGGGCGAAAGTCAGCATGCAGTATTTGAAGTGG
ATAAATGTATATGTAGATGTCGGATAACATCAAATGATTGCCCTCCAGGG
ACGCGCTTTGAAAAAGAGAGCTGCGCATGTATCGATCCCGTCAAATTTCC
AACAGGCTTTGAATGCTGAAATCATTTCGATGTTATCCGTCCGAATCTCT
GGTTGAAATCAATAAAGAGAGAACTGATGTTCTTCCTAGCTATATCAAGA
TGAAAACAGATTGCACATCCTGTTGCTTGAACTCCCTGTTTGAATGTGTA
GCTCCAAGAAAAATCATGAAGATGAAGAAATTTAAACAGTTTTCAACGAA
ACGTCACTTGGAACGATTTTTTGAGAGAAAATAATGTCTATGTAGATTGG
CAAAGAGACGTCACAAATCATCAAGCATTGCATCTCTGGATCAGTGGAAT
CATTGCTATGTTATTGAAAAGAATTGTGAATCATCATATATTAGACGTGT
ATTTGGGCGAAAGTCAGCATGCAGTATTTGAAGTGGATAAATGTATATGT
AGATGTCGGATAACATCAAATGATTGCCCTCCAGGGACGCGCTTTGAAAA
AGAGAGCTGCGCATGTATCGATCCCGTCAAATTTCCAACAGGCTTTGAAT
GCTGAAATCATTTCGATGTTATCCGTCCGAATCTCTGGTTGAAATCAATA
AAGAGAGAACTGATGTTCTTCCTAGCTATATCAAGATGAAAACAGATTGC
ACATCCTGTTGCTTGAACTCCCTGTTTGAATGTGTAGCTCCAAGAAAAAT
CATGAAGATGAAGAAATTTAAACAGTTTTCAACGAAACGTCACTTGGAAC
GATTTTTTGAGAGAAAATAATGTCTATGTAGATTGGCAAAGAGACGTCAC
AAATCATCAAGCATTGCATCTCTGGATCAGTGGAATCATTGCTATGTTAT
TGAAAAGAATTGTGAATCATCATATATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000095_pilon | genome | sc0000095_pilon:888426..892092 - |
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