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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000095_pilon:888392..891888- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12576.1.p1 ID=MSTRG.12576.1.p1|Name=MSTRG.12576.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3497bp|location=Sequence derived from alignment at sc0000095_pilon:888392..891888- (Clytia hemisphaerica_ch_hm2_pilon)
CAATAAAATATATTCATCAAAATTCCCTCTAAAGATAAAAAAACATGTCC
ATGTCCTGTCCATTCGTTATCTCGCCTTTTAAGATGTGGTCTTCAGAAAC
ACGTTTCACTTAATTTACTAAGAAGCTTAAAGACTAATTTGACATTGATT
TTACTTGACATGAATTATATTTTATACTTATCTTGTAAGTTATATTCTAA
ATTTCGTATGATATTTTACGAATTTACATGCATAACGTTTATAAACAAAT
GCAGGCTAGGTTTTTGGTACCCAAACAATGGCTCTATTGTTTGAGAACAA
TAGAATGCTAATTATAATGTGAGCCTGATAGACACTTGGTATGACACCTG
GTATGACTACCTATGGTAGACACTTGCTTATAAAAATTTTGACAATTTAA
CTCGTTAATTTGTATTATCATTTCAGCATTGCATCTCTGGATCAGTGGAA
TCATTGCTGTAAGAATTTGAATATTTTTACTTTAATTTGATTTCACACAT
AATTTTTAACTTTCTGAAAATTTAAACTCGTAAGTTCTTCTTTTTCAACT
CGAAGCTGATGAAAAAAATCCTTGAAATTTTTTAAAGTTTTACACATAAG
CCCAATTTGAATTTGTGGGGCTATCTCATTGGACGAAACAAACTTTATTA
TTGAGAATTCGAGTGAAAGTCGGCATGTGTGTCAGTGTCTTTTTTTTTGC
TCGAATTAAATTTGTTTTTCTTATCAGGTCACTTGGAACGATTTTTTGAG
AGAAAATAATGTCTATGTAGATTGGCAAAGAGACGTCACAAATCATCAAG
GTTTGTTCTCCAAATTATCTTCATATACGATCTATCTCTATTATCGAGTC
ATGAGTATTTCCTTGTCTAAATTACGTGCTTTCTGTGAACGAGTCTACCT
ATTAATCATATGTTTTCGTAAGCCTAGCGTCACTCTAATTAGAGCTTGAT
TCTCAGAAACTGGCTCAAAGTTTTACTTTTTTAGCCCACTCGCTGTTTTT
TTGTAATTTGCTTTTTGTGCAAACTTTTTCTAGAAGTAACGACGTCATCA
ACCCCCCATACTCTCTTTCCCTGCCTCTCTTCCTTGTGGTTGTCGTTTGT
ACGTTCAACAGATCTTTCTAAAAATTGTTTTTGTTTCTCCAAGGGAAGGG
CAGGTGGTTGAGGAGCTAAAAGTGTGGTATGCAAAGAACTTGCAGAGGAT
TTAAGTTTCATTATAACCTTTCATCGTTTTTAATTAGCCTTTAGAATGTT
TGTGGGTTGTTTGAATCAAATTATGAAATATAAGCATTTTTTTTGTTCAT
TTTAAAACATACCAGCATGTCATGGTCACTATAGATTAATTTGCAGTGTC
ATTGTATGCCAAAAGTTTAGCGATATAGTACACCCTCTGGCCACTGCCGG
CTATTTACACAGATATACCAATACACTTTTTGACTTTGATAGCTTGCCTA
ACCTTAACCAGCTTGATTTCAAACAAACGGGAAAAAAAGTTTCCTTCTCT
ACTCAAATTTAAAGTAAACAGAGAAAAAACCTTGATTTCTTCTAAAATTT
CATCTACATGTTTCTAGTATAACTTTTAGGTGTCCTAAGTTCTGTAGAAT
TTCCAAATTTTATTTTTCATATAATAAACCTCATAACCCTCCAAAAGGGT
TACTGTTCGTTTTCGTCTGGCCTCTTATAAGAACTTTAATATATTTCCTG
TCTTTTTATATATAGAATCATTTCGATGTTATCCGTCCGAATCTCTGGTT
GAAATCAATAAAGAGAGAACTGATGTTCTTCCTAGCTATATCAAGATGAA
AACAGATTGCACATCCTGTTGCTTGAACTCCCTGTTTGAATGTGTAGCTC
CAAGAAAAATCATGAAGATGAAGAAATTTAAACAGTTTTCAACGAAACGT
AAGTCTAAGAATTACTTTGTATATTAACTTTCAAAGGATAGTTAATGCTC
TTTCCTAGAAAAACCTGACACGCCTTCTGTTGAAGTTACCTCTTAAATCA
TAATCCGATAGATTTTAAATCCCAGGATTTTAAACATTTACTTTGCAATT
CCTTGATCTCGTTAAAACCACTTGACAATTTACAGTGACACCCTGTAATC
GTACTTCGGGCCCTGCTAAAAAAATTATGTAAGGTTTTTAATCTAATGGA
CGAGAAGGTTTTTAATATTGACTGTCTTTGATATCAATCACATCAATAAT
ATCAATTTCAAGGACGTGTCCCTATCGAACTAATCTTGATCATTTTAAGT
ACTAATAAAAGGATTTCCTACTGGTAGAACACTGCTTACCAAAAAACAAT
TTCCGCCCCTAACACCCTCTAATAATTACAGCCCAAAACATTCTTTAGAT
TTTGGAAAGTGCTTTAATGCTTCCAAAATCTTTCCTGGATCCACGATCTA
CAAAATTATTTATTCTTTCGGAAATTGACACCCCTTTGCTATTAGGATTA
TTTGTCACTAAAAGAAATAAACAAAGATTCGTCAAAATTTGTATAGAAGG
CCCTCGTTATTAATCCGCATTTACGTGATCGGAAAACAAACCACGTGCAG
GTTTAAACGGGTCTGCAAAATTTGTACAAGGTGCTACCTATTAGTCATTG
CCTCATGTTTTGACTCTTGTCGATAATGTCACAAATATGATTTGTTGAAG
CGTCGAAAAGATAATTTCAAGCAAGATGTTGATACTTAATACATATCATA
GTCCGATTAAATTTAATATTCTTTTCGTTAAAATATTTGACACAACTAAA
TGTCATCCAAATTTCAAACTTAGTTGCTGATTTTGTTTCGGTGTGTCACC
CAATATTTATTAATTAAACCCTACAGTTATCTCTTAGCCAAACTTTTGAA
TAGAAATTCCGCACATAATAATTTTAGTACATGTCCCGGGTTTAGGTAGT
TTCAGTGAGACGAGGGTGTCTAGATGAAGGGCTAGCAATTAAGTAATTTA
TTAAATTTATACTTGGTAGCACTTGTACTTTTACTGAAAACTCGAAAAAG
CCAAAGTCAATCTAAATCCTACCAAAATTTTAGCCCTTCTTATATATCAC
ATGGTTATGCTCTTTTTTTGTGAGTCAGAGGGTTTGACGTGGTATCAAAA
TTACTAATTTTTCCTTTTATTCTATTTTCAGACGTGTATTTGGGCGAAAG
TCAGCATGCAGTATTTGAAGTGGATAAATGTATATGTAGATGTCGGATAA
CATCAAATGATTGCCCTCCAGGGACGCGCTTTGAAAAAGAGAGCTGCGCA
TGTATCGATCCCGTCAAATTTCCAACAGGCTTTGAATGCTGACGAAGAAG
AGAATGGGGACGACAATTTTTTCATAGATAAGGAAACTCGTTACCATTAT
TTTTAGAAAGGACATTAAACCTTATTACAATTATTCTTAATGGTAGTTAA
TTAATTGTTTTAATATTATTATTTAAAGGATGTATCTATATATTGATGTA
GTAGTCTTTAAAGAACTTTTGACAAGTTCGCACTTGTTTTTAACACA Coding sequence (CDS) from alignment at sc0000095_pilon:888392..891888- >MSTRG.12576.1.p1 ID=MSTRG.12576.1.p1|Name=MSTRG.12576.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2370bp|location=Sequence derived from alignment at sc0000095_pilon:888392..891888- (Clytia hemisphaerica_ch_hm2_pilon)
ACGTGTATTTGGGCGAAAGTCAGCATGCAGTATTTGAAGTGGATAAATGT
ATATGTAGATGTCGGATAACATCAAATGATTGCCCTCCAGGGACGCGCTT
TGAAAAAGAGAGCTGCGCATGTATCGATCCCGTCAAATTTCCAACAGGCT
TTGAATGCTGAAATCATTTCGATGTTATCCGTCCGAATCTCTGGTTGAAA
TCAATAAAGAGAGAACTGATGTTCTTCCTAGCTATATCAAGATGAAAACA
GATTGCACATCCTGTTGCTTGAACTCCCTGTTTGAATGTGTAGCTCCAAG
AAAAATCATGAAGATGAAGAAATTTAAACAGTTTTCAACGAAACGTCACT
TGGAACGATTTTTTGAGAGAAAATAATGTCTATGTAGATTGGCAAAGAGA
CGTCACAAATCATCAAGCATTGCATCTCTGGATCAGTGGAATCATTGCTA
TGAATTATATTTTATACTTATCTTACGTGTATTTGGGCGAAAGTCAGCAT
GCAGTATTTGAAGTGGATAAATGTATATGTAGATGTCGGATAACATCAAA
TGATTGCCCTCCAGGGACGCGCTTTGAAAAAGAGAGCTGCGCATGTATCG
ATCCCGTCAAATTTCCAACAGGCTTTGAATGCTGAAATCATTTCGATGTT
ATCCGTCCGAATCTCTGGTTGAAATCAATAAAGAGAGAACTGATGTTCTT
CCTAGCTATATCAAGATGAAAACAGATTGCACATCCTGTTGCTTGAACTC
CCTGTTTGAATGTGTAGCTCCAAGAAAAATCATGAAGATGAAGAAATTTA
AACAGTTTTCAACGAAACGTCACTTGGAACGATTTTTTGAGAGAAAATAA
TGTCTATGTAGATTGGCAAAGAGACGTCACAAATCATCAAGCATTGCATC
TCTGGATCAGTGGAATCATTGCTATGAATTATATTTTATACTTATCTTAC
GTGTATTTGGGCGAAAGTCAGCATGCAGTATTTGAAGTGGATAAATGTAT
ATGTAGATGTCGGATAACATCAAATGATTGCCCTCCAGGGACGCGCTTTG
AAAAAGAGAGCTGCGCATGTATCGATCCCGTCAAATTTCCAACAGGCTTT
GAATGCTGAAATCATTTCGATGTTATCCGTCCGAATCTCTGGTTGAAATC
AATAAAGAGAGAACTGATGTTCTTCCTAGCTATATCAAGATGAAAACAGA
TTGCACATCCTGTTGCTTGAACTCCCTGTTTGAATGTGTAGCTCCAAGAA
AAATCATGAAGATGAAGAAATTTAAACAGTTTTCAACGAAACGTCACTTG
GAACGATTTTTTGAGAGAAAATAATGTCTATGTAGATTGGCAAAGAGACG
TCACAAATCATCAAGCATTGCATCTCTGGATCAGTGGAATCATTGCTATG
AATTATATTTTATACTTATCTTACGTGTATTTGGGCGAAAGTCAGCATGC
AGTATTTGAAGTGGATAAATGTATATGTAGATGTCGGATAACATCAAATG
ATTGCCCTCCAGGGACGCGCTTTGAAAAAGAGAGCTGCGCATGTATCGAT
CCCGTCAAATTTCCAACAGGCTTTGAATGCTGAAATCATTTCGATGTTAT
CCGTCCGAATCTCTGGTTGAAATCAATAAAGAGAGAACTGATGTTCTTCC
TAGCTATATCAAGATGAAAACAGATTGCACATCCTGTTGCTTGAACTCCC
TGTTTGAATGTGTAGCTCCAAGAAAAATCATGAAGATGAAGAAATTTAAA
CAGTTTTCAACGAAACGTCACTTGGAACGATTTTTTGAGAGAAAATAATG
TCTATGTAGATTGGCAAAGAGACGTCACAAATCATCAAGCATTGCATCTC
TGGATCAGTGGAATCATTGCTATGAATTATATTTTATACTTATCTTACGT
GTATTTGGGCGAAAGTCAGCATGCAGTATTTGAAGTGGATAAATGTATAT
GTAGATGTCGGATAACATCAAATGATTGCCCTCCAGGGACGCGCTTTGAA
AAAGAGAGCTGCGCATGTATCGATCCCGTCAAATTTCCAACAGGCTTTGA
ATGCTGAAATCATTTCGATGTTATCCGTCCGAATCTCTGGTTGAAATCAA
TAAAGAGAGAACTGATGTTCTTCCTAGCTATATCAAGATGAAAACAGATT
GCACATCCTGTTGCTTGAACTCCCTGTTTGAATGTGTAGCTCCAAGAAAA
ATCATGAAGATGAAGAAATTTAAACAGTTTTCAACGAAACGTCACTTGGA
ACGATTTTTTGAGAGAAAATAATGTCTATGTAGATTGGCAAAGAGACGTC
ACAAATCATCAAGCATTGCATCTCTGGATCAGTGGAATCATTGCTATGAA
TTATATTTTATACTTATCTT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000095_pilon | genome | sc0000095_pilon:888392..891888 - |
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