MSTRG.12568.1.p1 (mRNA) -

Overview
NameMSTRG.12568.1.p1
Unique NameMSTRG.12568.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000095_pilon:848539..849882+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12568.1.p1 ID=MSTRG.12568.1.p1|Name=MSTRG.12568.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1344bp|location=Sequence derived from alignment at sc0000095_pilon:848539..849882+ (Clytia hemisphaerica_ch_hm2_pilon)
atttctatttgCTCAGATTTCAGATGTTTCAACATTTTgcatttaaaatt
tctttcgtTCGCCCACGGTTACTTCATTTTGTTTGCTTGATGgtaataaa
aagacaaaattctAACCTTTAGCCTTCACTCTTCAGAAcagataattttt
caaaatatggtcagCCGTAGAAGATggcgagaaaatgtcaaagatcATTT
AATTGGCTTAATATGCGGTGCATCCGCGGGCTTCTTTTACGCTCTCGGTA
ATTGCTTCGTCCAATACATCTATCGTAAAAATCCGTATCTTGATTTGTCT
gaatttcaaatcattttcgTCCGATCATGCGTACAGCTTTTGCTGATCGT
TGTATTGTTGGCATGGAAACGCATTAACCCTTGGGGAGGATCATGGCCGA
ATTTCGGACTGTTATGGCTCATGGGATTCGCCAAAATATGTAGCATTGTT
TTCTTTTATGGATCACTAAGCGGCCTCCCTTTAGGTGATGCAACAGTTAT
TCTATTCACCGCTCCCGTGTTTACAATCTTCCTCAGTATTTTATTTCTGA
AAGAATCGTGCAGTTTGTGTAACATTATCCTTGGATTGTTCAGTTTTGTG
GGAGTTGTGATCATAGCAGCCCCTGGAATGTTCTTCCCTTCACCAGGAAA
ATCACACCAACATAAACAATCATCACATTATCATTCGAAACATGCTTTAC
TACCAAAGCATAACATCACATCCATTCATTCGCATTCAGTCATTATAGAC
AGCAACAAAATGAAGAGCGTTGGTTTTGGTCTGTGTGCGGCTGTTGCTTT
AGCTTTCCACATGATTATATTAAAAATCAACACCAAATCTGTGGACTATA
AAGTAGCATTACTTTATCCTAGTCTTTATGGGGTTATATTTTCACCGTTA
TTTATGATTGCTGAACACCACGATATAGTGCTTTTCCACGACTTGGATCC
TTTATATTGGGTGTTAATGATATGCAGTGGGTTTTTCTATTTTATCGGGA
TGATGTTATTGGCTTACGCATTACTGAAAGAAAATGCAGGTCCTGTTGCG
CTTGTTCGCAACTCAGAAGTCATTTTTGCGTTTGTGTTTGAAATATTGAT
CGAGGGACAAATGCCAATGATGTTCAGCATAGTTGGGGTAGTCTTGATCC
TATGGACGACTTCTatggggctcccccaggggctggcgtgacacgtgaat
gacccttttttctgtcgtgaatacgtgaattggactttttcggcgcgtga
atacgtgaattgagatatcaacgtgaacgtgaaaataagatttttccagc
gtgaattcgtgaatcgaaattttgagcgtgaacgtgaaaagcga

Coding sequence (CDS) from alignment at sc0000095_pilon:848539..849882+

>MSTRG.12568.1.p1 ID=MSTRG.12568.1.p1|Name=MSTRG.12568.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1035bp|location=Sequence derived from alignment at sc0000095_pilon:848539..849882+ (Clytia hemisphaerica_ch_hm2_pilon)
atggtcagCCGTAGAAGATggcgagaaaatgtcaaagatcATTTAATTGG
CTTAATATGCGGTGCATCCGCGGGCTTCTTTTACGCTCTCGGTAATTGCT
TCGTCCAATACATCTATCGTAAAAATCCGTATCTTGATTTGTCTgaattt
caaatcattttcgTCCGATCATGCGTACAGCTTTTGCTGATCGTTGTATT
GTTGGCATGGAAACGCATTAACCCTTGGGGAGGATCATGGCCGAATTTCG
GACTGTTATGGCTCATGGGATTCGCCAAAATATGTAGCATTGTTTTCTTT
TATGGATCACTAAGCGGCCTCCCTTTAGGTGATGCAACAGTTATTCTATT
CACCGCTCCCGTGTTTACAATCTTCCTCAGTATTTTATTTCTGAAAGAAT
CGTGCAGTTTGTGTAACATTATCCTTGGATTGTTCAGTTTTGTGGGAGTT
GTGATCATAGCAGCCCCTGGAATGTTCTTCCCTTCACCAGGAAAATCACA
CCAACATAAACAATCATCACATTATCATTCGAAACATGCTTTACTACCAA
AGCATAACATCACATCCATTCATTCGCATTCAGTCATTATAGACAGCAAC
AAAATGAAGAGCGTTGGTTTTGGTCTGTGTGCGGCTGTTGCTTTAGCTTT
CCACATGATTATATTAAAAATCAACACCAAATCTGTGGACTATAAAGTAG
CATTACTTTATCCTAGTCTTTATGGGGTTATATTTTCACCGTTATTTATG
ATTGCTGAACACCACGATATAGTGCTTTTCCACGACTTGGATCCTTTATA
TTGGGTGTTAATGATATGCAGTGGGTTTTTCTATTTTATCGGGATGATGT
TATTGGCTTACGCATTACTGAAAGAAAATGCAGGTCCTGTTGCGCTTGTT
CGCAACTCAGAAGTCATTTTTGCGTTTGTGTTTGAAATATTGATCGAGGG
ACAAATGCCAATGATGTTCAGCATAGTTGGGGTAGTCTTGATCCTATGGA
CGACTTCTatggggctcccccaggggctggcgtga
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12568MSTRG.12568Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12568.1.p1.exon1MSTRG.12568.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12568.1.p1MSTRG.12568.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000095_pilongenomesc0000095_pilon:848539..849882 +