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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000095_pilon:839616..847989+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12567.2.p1 ID=MSTRG.12567.2.p1|Name=MSTRG.12567.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8374bp|location=Sequence derived from alignment at sc0000095_pilon:839616..847989+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTTGCTTCgaagattttcagaaattttgcaaTGATAGCTGTTATGTCAC
GATTTATATTGATATTTATGTTttagtaaaaagaaaaaaagtaaacttGG
TGGATAATGACATGATAAGAAAATGTTAACATCGTGTTCAATATGAACCT
GGGTTTTCAGAATCAAAGAAATATATGGCTgtcattatcattatcattat
tatgttatgagaaatttcGATTTGCGGAGCAGTTTTCGGTGAGTGAATTT
ATTTTAAAGTAATTATTGATATAACACAAGATTTGTTTGCCCTGCTGATC
TCAAGGTGAGAGAGTTTATACgataaaaaacttatttttagaaCTCGTTC
GTgttgtttttaatgaattttattcAAAACACAAGAAATAGAGATTTTGA
AAGCTACGAGGAGACACCAAAAGTTTGAAAGCGACAAGTTAATCTGATGA
AAGCAACTCCCTTTTGCTATGGAAGGCAAACAAATAATACGACAAGATAG
AGAGGTTATCAGTTAATGTTTTGAATACTTCTCAACTCATTTGGTCTGTC
GTCAAGGAAACGTAACGACCGATTGATACTACGTGTATTTTTTGTGAAAC
AATTAGTTGCTGTTTTATAATCaaaaaaaTGATGGTATTAGAAAAGATGC
AGTGTTTCTGATGTTATGAGCTTATGTTATTATAACAGCAAAATGTTCTT
GTTCCTTTTGGTTGTTAACGTTTTGCAATTTTGTGGTTGTGAACTTCTGG
AACCGAAAAACGTGAAACGGAAAGTTAACCTTAAAGGTGAGAGCTTCTTC
TTTTACTCaacttttgaaattcttttcgaTATTCGTCTCAGAGAatttaa
atgatatatttttgTGGTTTGTTTTCCTCTTTAACCTCAATCTCATAATA
AATCTCATTTTTAATGAGAGCTTGATTTAAATCAGTCAAGTCACCAGAAG
TCACTATCTCTATAACGTTCTTTCTTTGACCAAAATTAAGCTACTTAATT
AGACATTTGTTCTAACTACttttaaggacatgttttttaattgtttcgtt
tttggcattttcaaaaaagctaaattttgattggggtaACTTGGAGGTCC
AAGATTTTCACAGGATGTTAGTAGTGATGATAGGACCCCAAAAAGTTCTT
TTCCCAAAATTCTAGCTGTTGTAGGGGCCAGTTAGGAGCAAATTTTAGCA
TTTGCATGTGTTTCGGAAAATGAtctaaatcagagctaaaaaccCAGGAA
GTTGTCTATCTGATCAATGATTCTCATAGAGGGATGGCAATTAAAGCAGC
CTATTGTTAAAAGGCCCACATTTTCCTATTGTGGGGCCCTTTTTAGAGCA
CTTTTTTAGCACCTATTTCCCCATTGACAATAAGTGCCAAAACACCAAAG
TAAAAGGCTTGATTGGGTATAAGACTTCCATAACTTCTTTTGAAATAGTT
GAATAATCAAGTTATTAACACCAATATAACACTTGAGCTGTTAAAGGGCC
CgtttggagctaaatttagcattttccactaaaaataCTGCAGCAGAATA
ACTAGTATGTTTCTTAACACATAATTAAAAGGCTGGAGTGGGTgtaaaac
cttcataacttcctTTGAAGTAGTTTAATAATCAAGTTATTAACACCAAT
AAAACATTTGAGCTGTTAAAGGGCCCgtttggagctaaatttagcaCTTT
CCACTGGAAATACTGCAATTTATTCTGCTTCTCTTACTAAAATTAACTTT
ACACCTAGtctaatttttgctaaattcagcTCATTTTGAGACCTAGGAAC
ATAAAATAACCTCATGAAGTTCTGTTCAATTATGTATCAAACATTAATGA
TAACTTATTTGATGTTCAAAACCTTTTCAGGGTCCAGAATCGAgcaaata
tttaacattttccgttaaaatgctaaaatactgcTCGTTTTTGGTCCATT
TAACTATGACAAAGACCACAGAAAAGACTTTTTAAGCTTCGTGAATGATC
CAAGCATCAAATAGCGCCTAAATGAGCTATGAAATAACAATAACCTTcgg
gttttcaaattttagcataAAGACATGGCCTTAAAGAACTTTAAGTCCAG
TcaatgctaaatttttgctcATAAAAGGACCCTGGAATGCTTTATATCGG
CCAAATTtggtttttctatctttttgaatGCCTCAAGTATACATAATATC
AATATCATAgttcttttgtgtttatcttaACTGTGCTGGTGGATTaaaaa
aaaGCCACACCCAATGCTAAAAACATGCTCATAATGGGACCATACAACCA
TTTTTAGTGATTGCTTATGTTGGTATATTGATCTTATAAGGTATAAAAAG
GCATGTGCAAAGTATTAGAGTCATAGCAGAAAAATTGAGAGAGATACAAG
CCTCTAAATCCAAATGCTAAGTATTTGCTCCTACTAAAATGCTAAGTATT
GGCTCATTTTTGGACCGCACTTTGTTGAAGCATAAGTCATGAcagattta
agctttagaaaaaattattttaaatttttaaagttcatctTTTCCACGCA
ACCATCATCAGGGCATAATTTTAGTTCATTCATTATATTAGAAATGAATG
ATGATTTCCCAAGACCCctaaaaacgaaacaattaaaaaacatgtcctta
aaGCCTTCCCCATATTGAATATCCAAAAATACAATACTGAAGTGTTTTTA
CTATGTATCatgcatacacgctttttttttataagaatacactttataag
aatgtccatgataaaaatggccaaaaaatgaagaatatgctcagaatatc
accatcatagaattttgctaccCAAGCTACGAATGCCATTTTAGACCATT
TTTTagtcaattaggatcctaacctaagaatgctgtaagaatattccagg
atgattttcccaaaaaagttaagaatatccatgatgaaatggatttacac
cattcttataaaaaaaagcgtgtagtattGTTGACAAGCCGATAGTTTCG
TAATTTGTTTTATCTTGTCTCACTGCACCGTCCCTTGAAAGATAAGACGA
CGTATTTTGTTAAAACGATGATAACGTTAAGTGACACTATTTATTGTATT
GTTCTCTTTTCCAGATATCTCGAAGCTTGTGCCACTCAATTTTGTAGCAG
ACACAGCTGGTATCGGAGATTTTGACCCTGAGAAAAATGGACTTCTTATA
CACGAATATTTTGATCAAGTATATAAGAAATATTCACAGTATAAGAAATT
CTCTGAACTTCAAGATGAACATATTTTAATGGTGGATCCTTTTAAAGACA
AAAATAACCCGTATGCTGACGctgttaaaaagtttaaatggGTTTTAGAA
TCCATATATCAAGACAATGGAGGTAAACTGGAttctgaaaaatcggggaa
CAATGACGCCCGATTTCAATTAGACTCTGCAGAGGTTGCAGAATATGAGC
GTCCAACTGTACCTCCCTTATCAGAAATTCAAACACCAGCAGATGTTGAT
GATTCAGATAATTTGTATGATGGAGATAATATACAATTGGATATCGATGG
AGATGATGATGGGGataattttaatgaatttaaGTAGTGAATGACACACA
ATTTTGTATATAATTTTTCTAGTTTCTTTAAAAGAAAGCTGTCACTAGCT
ATTGAATTTCCCAAACGTTATTAGTGTGCTCACATTTCGTAGGAGTGAAG
GTATTTAGGACACATTAAAGGTGCGAATCTAAAAAGTAGACGCTAGCTTT
CCAAACCATTTATAAGCAATCTTATAGGCGTTGGTGGTTTAAGCCCAAAC
AATTTGCTTCTTGAAACAATTTTAATAAGTTGTAATAAAATGTTAAATGT
TATGATTTGTGAATTGATAATTTTATTAAGTTCGAAGTATTATGGTTTca
tcatttttcttaaaataactcCAAAACCACCAAAATGTATAAACTTCTGA
CATTAAAATGAGAAGGAAGTCCCTATTCCTTTGATTCATTTGCGTTCATT
AAGAGAATTTGTGTCGTCATCATGACGTTTCGCGTGTCACAAATTAACAC
CTCTCCTTAGCCCTTTGTCGAGAAGCAAACTCACTCCAGGTTCAAACttc
tacattttttataagcaatcagTTGGCTAAGGCTCCAAGGCTCAAACTTG
ccaatttatttttcatctcgtaaagtaaaagtttttttgataatCTAACC
ATAGCAAGggatagcccttgacccaataacttaaatatataaatattgta
taatatcaggggtggtcaaagtaaacttttttttgataatcTAACCATAG
CAAGggatagcccttgacccaataacttaaatatataaatattgtataat
atcaggggtggtcaaagtaAACTTTCCAGAAGTTAGAGTTAGAATACTAT
GCAACTCTAGGGCTGACCCGAAAATTGcaattgcttataaaaaaatatgt
accaATGAATGCAATGCAGAATTTTAGGATTTTCAAGAGTTAACAATCTT
GTACTGTTTTGCCACTTAAAATGAAATGTTCTTGTTGTCTTTTAGACTTT
TCCGTTTATTACTTAGCTCTAGTTCAGACAAATTACTTTCTGTTCTCTCA
ATTCCAATTTTCAAAGCAGACGAAAAGTGGGCAGAAAGTttgcagttaaa
atctttgcttgaaaaagattaaatgaagtcattgcattaaACACCCACTG
GGATCCCTTCTCACTGGAAAGTTTTGcagaaatatcgtccccagttgAAA
ATTAtgctccaatttttgtccccattgaaaataatcaaataaacctcAAA
TAATGAACctaactgcaaaatattttgctatttttcccttccaaactaaa
ttttctgacttgaaaacaatggaatttaaatctGTGAAAAGGGTCTCCAA
TCTCCAGTTTTAattcgttatttttacccccaactggttgaaaaaaatcc
taccgggtctgtgaaaaaGGTGTGAAAAGGGTGATATTGAAGTCAAAAGA
GGGTAATGCAATGGACCATTCTGTGAAATTGTCAACTATGATTGGAGAGT
ATATGCTCGATTGGTATATGGGTATCGTAGCGTAGGTCCCCACTGGCGGT
ATCCAGCTCGGAAACAATCGGAATATGCAGGGCGAATAGAGCGTAGGTTC
TCCATCTCCTAGTGAGTGGAAGGTAACTGGGGACTTAAAAATGAGTCTTC
CATTCAATATGAAGAATTCGAGATGCTTTGGGTATAATTTTGGTCTCAAA
GGGACCCAGATGTAAGAGCAAAAATGTTAgggtttttcttttaatttctt
ttgatcttttttACCAGAATCTAATGGATAAATTATTTGTAACTGTCAGC
TTTGGCAAATATTCGATTGATGATTCTGATTTTCACGGTCGAGATAAATA
CGCTATTACAGGCTGTCTATAGTGTCAATAATTCCATGCTGATGAGGTAG
TATGACTCAATGAATTTAACCAAAACCTTTATGCCTTACTTTTTACTTAT
AACCTCTCATGCTCTCATGCATTTTTACGGTCTTAGTAATTTCTTCATCT
GCCAATCATACTAAACtcaactgtcaatcaaataaattAACACCAATCAA
TGGCAGTATAGATCATGCCGCCCTATTTATCGTGCCTCTCTCCAACCAAA
ATTTTTGTcatcttaattttaaacagtttaAGAGGAATTTTCGAGGAGAT
GTTAAATGAAAAAGGGAGTTTCTTTATTAATTCATCAGAAAGCAAACCTC
TTCCCTGTCGGTTTACATGTGCATGAAATAGTAGCTTATAACTTCCCTAT
GAAAATATTATACTCATGCTGCTGATTTATTGCTTTGTTCTCTGTTCAGA
TGCACAAATCTACTTATTTTCACCAGTTCTGATTTAAAGTACGCCCccgg
gggtactacccttgccgaccgacgagggtgctccgctgaggttcgaaaaa
tggactcTACTTGGgattcgttttttcaaaaattttgccgaaatttgcga
aaaaagtgaccctttgaatgggactaaaattccaaaattttctcaaattt
tctactttttcctaaattttccaaaaaaggcacccttcgAGGAACTGatg
tgtttttgcgaccctacctgggacttgtggaggttaaaaaaggtatagta
ccctgaccagcggcgcatctccgtaacccattttgccctagtaccccccc
ctccccggggATACGCCtcgttttagaaaaaattccttttggaaatattt
aagaatattttaaagtaATCTAACTTTTCTTTCATAACCATGGCCTTCTG
TTATGGGGTAATACTCTCTCATTTCTTTTGATTTGCGATGTATGTTAAGT
AAACAGAAATGCGGCCAAACAAAAGAACTTGATGAACAATAAACTTGTCA
GCACCAAAACGCAAATCTCGTTAAATCTTAAAGGTTAAAATTAAGGGAAg
gaaaaaaactgttttataaATTAAAACTTCATTAAATAGTCTATTTCata
attgatttttcttttcttttttttccaaaaggtttttttCAACTCGTTGC
TTTGATGCGCCATCTTGTCAAAGAGTCATCTCAACCAATTGACACATGTT
AAAAGCGGACATAGGATCCAATCGTTAATTAATGCTTATGATGTTCAAGA
TGTATAaaacccttcatatatttgtggTCGGCAGGAATGACAGATTTTCT
TTCGACATCTCAACTCAACCAAGTCAACTAAACATTAAGTACGACTCGAG
ACAGGATGACAGGCTTTTTGATAGACGATATTTTAAGCAAGAAAGTCGCC
AAAGAAAATGAGACGATTCATGTGAGATCAGCATTCCTCCCAACTCAATC
AGGTAAATTGAATATCCACTGTGAAAGGAATATTATTTTTGGTCTTAATC
CTTGCCAAAtatattctaaaaataaataacgccaaaatttttatttctgg
cTCAATTTTATCTtccttgatttttgaaattaaaagttaacctattacat
ttttatttcagatcACTATTGCAAACGTCTCTACGCGCCGCCCCTTCCGC
CTTTGCTACCACCATCAAACCACCATTACCACCCTTATCATCAACATCAC
CGCTTCTATCGTTCCCGATCACCTCCGTCTGCTATTTCACCTCGTTCATC
ACACTCAGACGATCTGGATCTTGATAAACTTTCACGCCGACCACGTACTT
CAATCACCATGTGCCAAAGAGAATTTCTGGAAACGGAGTTTCAGAAAGAA
AGATACCCGACACTAGCGTACATCGACAAATTATCACGCAAAGTCCACTT
ACAACAATATGTCATAAAGGTAAGCCTCTCCCATATTATTCAAAATGAAT
GTGATGCACTATCTATCTTGTACGTCGCACGGTAGTCTGACACTTTCTTG
TCCGACAATAAAACATTctgaaaacaatcgaaatgGGATCAGCCCGGAAG
TATATCTACTCCGACTGCttttttttttGTCCGAAGACAATCGcatattg
ttttttattattcacGATTCGGACTTTGAAGACGGTCGAAGGTGGTCGCC
TAAATTCCCTGACTGTTTCGTTAACAATTGGTAAAGAAATCTACTTTTGG
TGGAATTGTCATACTTGGCAACTTTTGGGTCTATTTTAACGAATTTCAAC
CCCTTTTTTCACGGTAAATATACAAGGGTGTTCCTAGGAAAAATTTTAAT
CTAGAAGAACAAGCTAGTCGGAtaaagataaagatttttgttgttCCATT
TCAGGTTTGGTTTCAAAATCGGAGAGCAAAATATCGAAAAGAAGGGCACC
GTCGAAAACCTTCCAAAGAAGACACAAACACAAATCCTgagtattttaca
gaacgaAAGGAAAGCAAAGACGACAAAGTACATTTATTGAAAGTTCATTC
TTCCGAAAAATACACACCAGCTACAGCAACGAAATATAGTGGACGGTATC
TCTATAATGAAAGGAATTCAGCACAAACGTTGCTATGGCAACCTCGAATG
AAATCATCTTGCGAAGAGCATTGTGGGTGCTTCACGTGTGGGTGATTGAC
CGATAGTCTATTGAATCGATTAATTGACTTCATATTGCGCTAATTAATGA
ATTCACTTATTTACTGTTTTGTCGGAATCCTTCTTCTCACTgacattcaa
aataatcatCAAGTTCATAATTACATGGGATGTTTAAATTTAGTTTCTAG
Aatttagttgtgtattatagattgtattattcaattattgtattatataa
attccttatttttttgtcatatctttttgtttttcgttgcattttattga
agagtatttattggttgttgatatttatttgagaatttattcagaaaaag
aaaattattactTGTTTACTATAA Coding sequence (CDS) from alignment at sc0000095_pilon:839616..847989+ >MSTRG.12567.2.p1 ID=MSTRG.12567.2.p1|Name=MSTRG.12567.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2088bp|location=Sequence derived from alignment at sc0000095_pilon:839616..847989+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAGGCTTTTTGATAGACGATATTTTAAGCAAGAAAGTCGCCAAAGA
AAATGAGACGATTCATGTGAGATCAGCATTCCTCCCAACTCAATCAGatc
ACTATTGCAAACGTCTCTACGCGCCGCCCCTTCCGCCTTTGCTACCACCA
TCAAACCACCATTACCACCCTTATCATCAACATCACCGCTTCTATCGTTC
CCGATCACCTCCGTCTGCTATTTCACCTCGTTCATCACACTCAGACGATC
TGGATCTTGATAAACTTTCACGCCGACCACGTACTTCAATCACCATGTGC
CAAAGAGAATTTCTGGAAACGGAGTTTCAGAAAGAAAGATACCCGACACT
AGCGTACATCGACAAATTATCACGCAAAGTCCACTTACAACAATATGTCA
TAAAGGTTTGGTTTCAAAATCGGAGAGCAAAATATCGAAAAGAAGGGCAC
CGTCGAAAACCTTCCAAAGAAGACACAAACACAAATCCTgagtattttac
agaacgaAAGGAAAGCAAAGACGACAAAGTACATTTATTGAAAGTTCATT
CTTCCGAAAAATACACACCAGCTACAGCAACGAAATATAGTGGACGGTAT
CTCTATAATGAAAGGAATTCAGCACAAACGTTGCTATGGCAACCTCGAAT
GAAATCATCTTGCGAAGAGCATTGTGGGTGCTTCACGTGTGGGTGAATGA
CAGGCTTTTTGATAGACGATATTTTAAGCAAGAAAGTCGCCAAAGAAAAT
GAGACGATTCATGTGAGATCAGCATTCCTCCCAACTCAATCAGatcACTA
TTGCAAACGTCTCTACGCGCCGCCCCTTCCGCCTTTGCTACCACCATCAA
ACCACCATTACCACCCTTATCATCAACATCACCGCTTCTATCGTTCCCGA
TCACCTCCGTCTGCTATTTCACCTCGTTCATCACACTCAGACGATCTGGA
TCTTGATAAACTTTCACGCCGACCACGTACTTCAATCACCATGTGCCAAA
GAGAATTTCTGGAAACGGAGTTTCAGAAAGAAAGATACCCGACACTAGCG
TACATCGACAAATTATCACGCAAAGTCCACTTACAACAATATGTCATAAA
GGTTTGGTTTCAAAATCGGAGAGCAAAATATCGAAAAGAAGGGCACCGTC
GAAAACCTTCCAAAGAAGACACAAACACAAATCCTgagtattttacagaa
cgaAAGGAAAGCAAAGACGACAAAGTACATTTATTGAAAGTTCATTCTTC
CGAAAAATACACACCAGCTACAGCAACGAAATATAGTGGACGGTATCTCT
ATAATGAAAGGAATTCAGCACAAACGTTGCTATGGCAACCTCGAATGAAA
TCATCTTGCGAAGAGCATTGTGGGTGCTTCACGTGTGGGTGAATGACAGG
CTTTTTGATAGACGATATTTTAAGCAAGAAAGTCGCCAAAGAAAATGAGA
CGATTCATGTGAGATCAGCATTCCTCCCAACTCAATCAGatcACTATTGC
AAACGTCTCTACGCGCCGCCCCTTCCGCCTTTGCTACCACCATCAAACCA
CCATTACCACCCTTATCATCAACATCACCGCTTCTATCGTTCCCGATCAC
CTCCGTCTGCTATTTCACCTCGTTCATCACACTCAGACGATCTGGATCTT
GATAAACTTTCACGCCGACCACGTACTTCAATCACCATGTGCCAAAGAGA
ATTTCTGGAAACGGAGTTTCAGAAAGAAAGATACCCGACACTAGCGTACA
TCGACAAATTATCACGCAAAGTCCACTTACAACAATATGTCATAAAGGTT
TGGTTTCAAAATCGGAGAGCAAAATATCGAAAAGAAGGGCACCGTCGAAA
ACCTTCCAAAGAAGACACAAACACAAATCCTgagtattttacagaacgaA
AGGAAAGCAAAGACGACAAAGTACATTTATTGAAAGTTCATTCTTCCGAA
AAATACACACCAGCTACAGCAACGAAATATAGTGGACGGTATCTCTATAA
TGAAAGGAATTCAGCACAAACGTTGCTATGGCAACCTCGAATGAAATCAT
CTTGCGAAGAGCATTGTGGGTGCTTCACGTGTGGGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000095_pilon | genome | sc0000095_pilon:839616..847989 + |
|
