MSTRG.12558.1.p2 (mRNA) -

Overview
NameMSTRG.12558.1.p2
Unique NameMSTRG.12558.1.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000095_pilon:738474..740337+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12558.1.p2 ID=MSTRG.12558.1.p2|Name=MSTRG.12558.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1864bp|location=Sequence derived from alignment at sc0000095_pilon:738474..740337+ (Clytia hemisphaerica_ch_hm2_pilon)
TGTGTTACTCCATTCTACTTCTCCTTCACTCAGATGAATTTTGGaaatta
aattatatttttctttatattttagtgaaacattacaaacaacaaaataa
agaaaaatgtcagaaaaatgTTGTCCGGCTGATAGTGCTGCTGCCCTGTC
AACAACATATCAACCAAAAGGTGTTGAAATCGATTTAGATGGATTGAAAT
GTTACACAAATGGAAAAGGAGGTAAATCAATCATCGTATTTTACGATATT
TTTGGATATAATGGAGGACGTACTAAACAGATTTGTGATCAAATTGCTGA
TGAAGGCTATTATGTAATCCTGCCTGACATTTATGATGGTGATTTTTGGC
CAGCTGACAAGCCAATTCAACCTGAGCCATTATCAAGCTGGTTCAAAGGA
TTTCCTTGGATTCCTTACCAGAAAGAAAGGGTGGATAAAGTGATGGCACA
TTTACAAGAGAAAGGTGCTGATCAATCGATTGGTTGTCTAGGATTCTGTG
CTGGTGCTTTATCAGTCTTTCATCTGTGtgcgaatgaaaaattgaaatgt
ggAGCATCTTGTCATCCAAGTGTTCAATTAGCTGGCCTCTTTGGTAGTTC
ACCAGAAGCATTAGCCAAGGAAATTAGATGTCCACAATTATTGTACCCTG
CAAGTGGCGATTTAGCTACATATAAACAGGGTGGTGAAGTGTTTTCAATT
TTACAGGAGAAGTTTGCTGATAAATTTGTAGCCAAGGAGTTTGTTGACAT
GACCCATGGATGGGTTTCAAGAGGTGATATAAAGGACCCAAAAATTGCAG
CTGACGTCAAATCAGCTTTAGATGGTGttttgagcttttttaaagCCAAC
ATGTAAGTTGACAGAAACGAGCCTTACACTTTTCAACTTAgtctatattt
tatgaaagATCTTTGTcgaggtttttttatttttcaataaaagggattta
aatttttaaaattaaaaatattttttacaaatttttatgtAGGTTTAATG
GGTTTGTTCTTGAtaattttcaaaggaattttgttCTGTAGGCAAAAGTT
TTCAATACCAAATTTAAGCTCTTTTTACGACTGGTCACGTCGAACCATAT
TTGCTCAAgtaaatcattattttttcaagtGAAATAACTAAAATGGCTAT
AATTTACCTATCTTATTGCATTTGTTTGATAGGCTGATTGCTAAGCtgtt
gcaatatttttattaatttgtgttttttatgtAAGTGTCATTGCTATTTA
ATCTGAAAGTTTATAAACTTTCTTGTAAAAGCATTGAAGATGGCGAGACT
CTCGACACTCATCTGCTGTTTGTTCCTTACCTGCGTTTTATCTGATATCG
TTGTTGGAAGACGCACTAATGAGCGAACAAAAGTGCTCGCTAAGCGTGGC
TTAACGGAAGACATCCTAACAGCAGGTAGTGGACCAGTATGTGCTTACAT
TATCTCTTTCACGTATACCATGGCGAAATATCAACTGGAAAAGTTAACTC
AGTACCTGTCACAACATCTCCCTTCAATCACGAAACGCGATCTTGAAGCT
GTCCTAATGAACAAGGCAGATCTTCAAATGGATTTTGATTTGTATGGTTC
TTTGGTCACAGCGTACAGAAGTTTATCTTGCAAGTTGATCGTTTCATATC
TCAAAACTCATTTTCAGTCCTCCTTCCAAATGCTTGTCCAATATATCACC
GATAACATAGTCAACATTGTCGGATAAATTTGAAGTGAAGTTTGTaacat
tttcttgttgtttttttactcCAAAAGAAACTTACAAACCCAGTACTTGT
GTGTGTAAACTTTCTTACCcattcaaaatgaataaaatgttTGCTAGGTT
TACTACTAGTGCCC

Coding sequence (CDS) from alignment at sc0000095_pilon:738474..740337+

>MSTRG.12558.1.p2 ID=MSTRG.12558.1.p2|Name=MSTRG.12558.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=438bp|location=Sequence derived from alignment at sc0000095_pilon:738474..740337+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGAGACTCTCGACACTCATCTGCTGTTTGTTCCTTACCTGCGTTTT
ATCTGATATCGTTGTTGGAAGACGCACTAATGAGCGAACAAAAGTGCTCG
CTAAGCGTGGCTTAACGGAAGACATCCTAACAGCAGGTAGTGGACCAGTA
TGTGCTTACATTATCTCTTTCACGTATACCATGGCGAAATATCAACTGGA
AAAGTTAACTCAGTACCTGTCACAACATCTCCCTTCAATCACGAAACGCG
ATCTTGAAGCTGTCCTAATGAACAAGGCAGATCTTCAAATGGATTTTGAT
TTGTATGGTTCTTTGGTCACAGCGTACAGAAGTTTATCTTGCAAGTTGAT
CGTTTCATATCTCAAAACTCATTTTCAGTCCTCCTTCCAAATGCTTGTCC
AATATATCACCGATAACATAGTCAACATTGTCGGATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12558MSTRG.12558Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12558.1.p2.exon1MSTRG.12558.1.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12558.1.p2MSTRG.12558.1.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000095_pilongenomesc0000095_pilon:738474..740337 +