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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000095_pilon:641739..645536- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12555.1.p1 ID=MSTRG.12555.1.p1|Name=MSTRG.12555.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3798bp|location=Sequence derived from alignment at sc0000095_pilon:641739..645536- (Clytia hemisphaerica_ch_hm2_pilon)
GAAATCAAAGAAAGTAGGGGGTGAGACAACATTTGAAACACGCGAGAAAT
ATAGAGAAATACGTAAACGTTAGATGACGAATTTCGTTCAAATGAGGTTG
AGGTAGGATATCATAGTATCATGTCATTAAATTTTTCTTTTTCTTCTTTT
TCACAATAAGAAGAAACGAAAAGAAGATTTATTGTCCGGAATGGAAGACT
TTTTAAGCTTTTGTTCGTAGGTTTATATTCCGGATGGATGTAGGCATGCT
TTAAAGAAGTCATTAGTAACAAGTTTACGATTTGTCAACGAGATTTGGAT
TTAGATTCAGCATGATATGTGAAAAGCATAACATTCAATGAAGATTTTTC
AGAATGGAGGACGACAATGACAATTTTTGCTTTAGATTTAAAGTCTGTAA
AGTTTAGTTAAGAAAGTATTCAATCATATGTTGAACTACTAGAGAATATT
TGAGAAATATTGTCAATCTGACCCATAACAAGTTTTGCATTAACGTATTT
TCGTTTTTCGTCGATAAATGTTGAATCAGTCTGATCAGACAAGTGGGAAA
TCTCTAAACAAGTCTTGTGACAAGTTATTTACTGATACTTGAAGTTAACG
ATGTGTTGTGTTGTATGAATGGTCTCGTGACAAAATGTTTCCATTCCAAA
AAGGTTAATGATTCATAGGGTCTTGTTACAAATGTGATGTTTGGTATGAG
GAGTATATAAATTGATTTGATACTGATGAGATGATGTTTCCTTTAGTAGG
TAGGAGAGTTAGCATTTAGATCATATTGAAGGGGCCCATTGAAGCTGATG
AAAATTCTGAATTTTAGAAAAACAGTCAAATTTGTAGTATGTAATTTTCA
GAAGATTCTAAAACGGGGTTCCGAATTGATTGGCTAAACAAGCTTTTCTA
TTTGCTTGATGTACCCTAGAGTAGAGCTTGGCGCTGGCACATCGGGTAGT
TAGTTATAAGATTAGTCCATAGATAACCTATTAATCAAAAGAGCTTGAGA
TTTTGCACTTCTGTCTCAATGACCAAGAGATTAAATGTGTAATGGGAAAT
ATCATTTTAACTGTATATTGAATAACTCTATTCATTTTGAGAGAGAATTC
CATAATGGTTGTTTTCAGCATGTGCTACATTGCGAAAGGAAAACCCAAGA
GTGTTATACCAGACTAGTGGCGTAAATAAATCGGTACAGCCGAATAAAGC
GCCGAGTTTGAGCCTGATAATCTAGTAAAACAACACTTTTAAGGCTGGTA
CATAGTAGGTCCGACTGCTGACAAGCTTTCTGACGAAAACGGGATTACGT
TACATATAAAATGACATGTCTCAGTTTGGAACAGTTCGACGGTTGTTTGT
TTTTCAGTGAAAAGCAACTATCATTTTATCAAATATTTTGTTTCCATCAT
TGGAAGACCCTAGTAAATATAGTTTTAATGTTGTAGGTATGCAATACAAA
TAGTGGGATTACTTTCTTATCATCACGTCTCGATTTTCAACAAATCTTTT
TTTTCTGCAGAAATGCGTTCTTAATCTTTTGAAATATCAATTCATTTGGA
ATTTGTTTCCACCGCGAATATATATCACAGAATGACAATCAAAGTAGACG
CACAACAACAGACCAAAATGAGACTTTCTTCGTCACCGCTTCCAAGCATC
AATAAAAAGACTTTTAAAATCGTGGTGTTGGGTGAAAAACATTGCGGAAA
GACAGGTAAGTTGGATCCAATCACATCTAGCTGACTTTTGTAATATTGAT
AGGCCTTATGATTATAGAATTATACTACTGAGTAGAAGCCAAAAGTTGAT
GCAGGCTAGATTTTTATTGGTCAATTTATTTCAATTTTGAACTTTTACGA
AGGTTGCGAGTGCCACGTTGTAGAGAACTGCGACATTTGTTCCGGAAAAA
TCTTGGAATCAGTATTAAAAAAATTGATACACCTCAAGAAGGTGTCTAAA
ATATGACCAGCAACCAGTATTAAAAAGAAGGATATTATCTTGAAACCAAA
AAAATATTGCCAGCAAATACGAACAAATATATCATTTTTTGATGATTCAT
GAAACATCAGGCATTGCATCTCTCTTTGATAAAACAACATTGTGGGTTGA
CCCAAAACATCATGACAAACCCATACAACATAAATCAGTTATGTCAGAAG
GAGAAAGAAACCCTGCTGATGGAAAAATACCTTCCTCCGCAGAAAATGTA
TGGACGGAGGTTTGTGTACGAGATAAACAAGTACGGATTAGGATATATGA
TTATGCAATGTTTGCTTTCTCAAGTAATCAGTAAAACTAAATCTCGTGTT
AAACGTTATTATAAACAGCATTTTTTCAAGATTCTTGATTTTTTGTCTAC
TACTTGTCTGTAGACCAGGTCTGACTTTGTAAAACTAACTAGAACATCCA
AGTTATTATTTACTAAGAACCTAAATTTTGCTGATTGAATCAAGTGAGCA
TCTGTACCATACCTATGTTAGTGCTAACCGAAGCTTTGTTGAGTAAAATG
TCTGCAAATGATTCAATTTAAGGTGCTTTGTAGAAATAACCATACAGTAC
CCACTTCAACTAAACTCTCAAAATTTGATATGGAAGCAAAGTGACATATT
TTCACATTTTTGACTCGTTTTAGCGTTGACAGTTCGATATTTGACGGGGA
AGTTTATTTACGATTATGCGACCGGTGAAGATTTCATTTACCCTCATCAA
GCAAACTTGAACAACGGAGATGTCCAAATTAATATTGTCGATACTTCACA
AAATGTAAGTAGAATAGAAAACACCCCTGTCTCAAACAGTGTAACAGTAC
ATAAAAATTTCACTGAGTTCACTAAGTTTCACTGAGGCAAAAAGGGTCCT
TGAGCACTTAACTTTCAGAAATGACTGGTAGCAGTTACTGTAAAGCTGTA
GACTGGTAGCAGTTGAAACTTTTAGCTTTAGTTTCCAGGGTGAGCTAAGA
TCTGTACTTCTTACACATTTTCTCCTTTTTCCATACACCCCTTACTATAA
AAATCAACTACTTGTACATATTTCAAAACTTAGGAACAATATTTTTGATA
TTTTTTAGACAGTGACCAGCGCGATTGTGGATGCAGATGGAGTAATCATT
GTGTATGCTATCAACAGTAAATCAAGTTTCCACAGAGCTGAAGAACTTTT
AAAACATGTTGTTGCTGTCAGTTGTAAACCCTCTATCGCGATCGCTGCTA
ATAAATCGGACATGTGGCATTATCGGACAGTTATGAGATCAGATGGTGAA
TATTTAGCTAAACAATACGGATGTAAATATTTCGAACTTTCCGCGTTGAC
GGATTATGAGAAGGTTCAGCGCATGTTTAATGTCATGTTAAAATTGATGA
ATGATCGACATACGGATAAAGAACTTATTGAGAGTAAATCTGCTATTGTG
ATTAATGACAGTTCACCGCCCCCGATTGAAGACTTTGAAGGGCGTCGAAG
GGCGAGATCTCTGCATTTACCTAAAGAAAATAAAGCTGTTAAAGTTGGAC
AAAGTAAAAGCCCGATATTATTCCGAAAATTGATTCGATCTTGGAATCAA
TCGAGTCTCAGTCGATCTAAATCAACAGAAAAGCTGTTTTAGATTTTGAC
TTGAGGGAAGAGAATCTATTCAAAGATGTTCAATGGTTAAAGATTGCCAG
ATTTTGGGCTGATTGAATTATGTGATTGTCAACACGGCTTGAAAATTTTC
AGAGTTTAGAATCCGAAGAAAGTTGACCTTGTAAGCTATAGATTTTAGAG
TATTTGCTAATAAATTGACTCTCAATTTTCATTTTTCTGTGTTTTCAC Coding sequence (CDS) from alignment at sc0000095_pilon:641739..645536- >MSTRG.12555.1.p1 ID=MSTRG.12555.1.p1|Name=MSTRG.12555.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2367bp|location=Sequence derived from alignment at sc0000095_pilon:641739..645536- (Clytia hemisphaerica_ch_hm2_pilon)
ACAGTGACCAGCGCGATTGTGGATGCAGATGGAGTAATCATTGTGTATGC
TATCAACAGTAAATCAAGTTTCCACAGAGCTGAAGAACTTTTAAAACATG
TTGTTGCTGTCAGTTGTAAACCCTCTATCGCGATCGCTGCTAATAAATCG
GACATGTGGCATTATCGGACAGTTATGAGATCAGATGGTGAATATTTAGC
TAAACAATACGGATGTAAATATTTCGAACTTTCCGCGTTGACGGATTATG
AGAAGGTTCAGCGCATGTTTAATGTCATGTTAAAATTGATGAATGATCGA
CATACGGATAAAGAACTTATTGAGAGTAAATCTGCTATTGTGATTAATGA
CAGTTCACCGCCCCCGATTGAAGACTTTGAAGGGCGTCGAAGGGCGAGAT
CTCTGCATTTACCTAAAGAAAATAAAGCTGTTAAAGTTGGACAAAGTAAA
AGCCCGATATTATTCCGAAAATTGATTCGATCTTGGAATCAATCGAGTCT
CAGTCGATCTAAATCAACAGAAAAGCTGTTTTAGCGTTGACAGTTCGATA
TTTGACGGGGAAGTTTATTTACGATTATGCGACCGGTGAAGATTTCATTT
ACCCTCATCAAGCAAACTTGAACAACGGAGATGTCCAAATTAATATTGTC
GATACTTCACAAAATATGACAATCAAAGTAGACGCACAACAACAGACCAA
AATGAGACTTTCTTCGTCACCGCTTCCAAGCATCAATAAAAAGACTTTTA
AAATCGTGGTGTTGGGTGAAAAACATTGCGGAAAGACAGACAGTGACCAG
CGCGATTGTGGATGCAGATGGAGTAATCATTGTGTATGCTATCAACAGTA
AATCAAGTTTCCACAGAGCTGAAGAACTTTTAAAACATGTTGTTGCTGTC
AGTTGTAAACCCTCTATCGCGATCGCTGCTAATAAATCGGACATGTGGCA
TTATCGGACAGTTATGAGATCAGATGGTGAATATTTAGCTAAACAATACG
GATGTAAATATTTCGAACTTTCCGCGTTGACGGATTATGAGAAGGTTCAG
CGCATGTTTAATGTCATGTTAAAATTGATGAATGATCGACATACGGATAA
AGAACTTATTGAGAGTAAATCTGCTATTGTGATTAATGACAGTTCACCGC
CCCCGATTGAAGACTTTGAAGGGCGTCGAAGGGCGAGATCTCTGCATTTA
CCTAAAGAAAATAAAGCTGTTAAAGTTGGACAAAGTAAAAGCCCGATATT
ATTCCGAAAATTGATTCGATCTTGGAATCAATCGAGTCTCAGTCGATCTA
AATCAACAGAAAAGCTGTTTTAGCGTTGACAGTTCGATATTTGACGGGGA
AGTTTATTTACGATTATGCGACCGGTGAAGATTTCATTTACCCTCATCAA
GCAAACTTGAACAACGGAGATGTCCAAATTAATATTGTCGATACTTCACA
AAATATGACAATCAAAGTAGACGCACAACAACAGACCAAAATGAGACTTT
CTTCGTCACCGCTTCCAAGCATCAATAAAAAGACTTTTAAAATCGTGGTG
TTGGGTGAAAAACATTGCGGAAAGACAGACAGTGACCAGCGCGATTGTGG
ATGCAGATGGAGTAATCATTGTGTATGCTATCAACAGTAAATCAAGTTTC
CACAGAGCTGAAGAACTTTTAAAACATGTTGTTGCTGTCAGTTGTAAACC
CTCTATCGCGATCGCTGCTAATAAATCGGACATGTGGCATTATCGGACAG
TTATGAGATCAGATGGTGAATATTTAGCTAAACAATACGGATGTAAATAT
TTCGAACTTTCCGCGTTGACGGATTATGAGAAGGTTCAGCGCATGTTTAA
TGTCATGTTAAAATTGATGAATGATCGACATACGGATAAAGAACTTATTG
AGAGTAAATCTGCTATTGTGATTAATGACAGTTCACCGCCCCCGATTGAA
GACTTTGAAGGGCGTCGAAGGGCGAGATCTCTGCATTTACCTAAAGAAAA
TAAAGCTGTTAAAGTTGGACAAAGTAAAAGCCCGATATTATTCCGAAAAT
TGATTCGATCTTGGAATCAATCGAGTCTCAGTCGATCTAAATCAACAGAA
AAGCTGTTTTAGCGTTGACAGTTCGATATTTGACGGGGAAGTTTATTTAC
GATTATGCGACCGGTGAAGATTTCATTTACCCTCATCAAGCAAACTTGAA
CAACGGAGATGTCCAAATTAATATTGTCGATACTTCACAAAATATGACAA
TCAAAGTAGACGCACAACAACAGACCAAAATGAGACTTTCTTCGTCACCG
CTTCCAAGCATCAATAAAAAGACTTTTAAAATCGTGGTGTTGGGTGAAAA
ACATTGCGGAAAGACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000095_pilon | genome | sc0000095_pilon:641739..645536 - |
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