|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000095_pilon:638052..641331- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12554.1.p1 ID=MSTRG.12554.1.p1|Name=MSTRG.12554.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3280bp|location=Sequence derived from alignment at sc0000095_pilon:638052..641331- (Clytia hemisphaerica_ch_hm2_pilon)
TGTAAAAAAATGGATAAAACTACAATAGAGCTTGACACTTCTAAGGTGCA
GGAAAATCCGAATGCCATTGGAATGGGGGAAATGACCACACCAAAACTGC
AAGATGAAAATCAAACTCCCTCATTGGTTGACAGGGAAAAAAAGAAGATT
TCAAGGGGGAAAGAAAAAATGGGGTCAAAACAAAGAAAAAACATTAAGCT
GAAGGAGAATGTTGATGAAGTTCTTGCACCATCGCCAAAGAAGAAAAGTG
ATAATGTCGCTGATGAAAATGATCGACTAAAGAAGAAAATACTTGAATTG
ACGTTTAGTCGTGACACAGGAGAGGTTGGGAGTCTGGGTCTGCTTGACCC
TTTTGATTAATCCATTTAATTGGGATTTTTTATGTATAGTGAACAACTTC
AAGTTTCTGCCCACTAATGACCATTGATTTAATTTATTTTAATTTCGAAG
GCGAAATTGACTCCCTTTACCAGACCTCCAACAGTGATTTAGTTCCATTG
AACGTATTTATCAAAAGGAGACAAACATCTCTGAACACAGCAAAAGAACG
TGACCTCATAAACCATCTTTAAGGGGTTTGATCCATCCTTCTTCATCAAA
ATTTCATTAAGCTATATTATACAAAATCACTGGCGTCAATAAAAAATAAA
TTTCGAAAAAACATCTAAAGAACTTTTCGAGGGCGTGAAGCATCATCAAA
AACTTTATTTACTCTTCTTCATTTTTCGTCAGAGTTCTTTTTTTGAAATA
TGTTGACAGATAACTGGTAGTAAAACAAACATGGTTACCGTTTAAGTCTT
TACAGCAGGTTGAGTGCTAGATATTTTGGTCGACATGTTATGTGAATATT
ATTACAAGTCTTTAGATTGTTTTTACCAGGGTCCTTTGAGCTGAATCGAG
CATTAGAATGGGCGAGAATTCGAACCTGAAATCCCTGGTTTGTGGCCACT
AAGTTATCGTTCCTTTTAATTACTGATAACATAACAAATTGTCCACGAAC
ATTTCCAAAGAGTTTATTTCTTCGATGACAACTCTTCCAAAGTGTTTCAT
GCAGTTTCAAACTCACAATTTGACTCAGCAATACCCGAAAGCTACTGATG
TTGATTTTCTTTCTCTCTTGTTTTCTTTCAGTTAGTCTCAAAAATGGATC
AAGAGTACGTGGAAGAATTGAAAGCAGCTTTCGAACACGCTGACATCAAT
GATAGTGGTAATATCCAAACAAGTGAACTGGTTATTCTTCTGAAGAATCT
GGGCGTGAACGTCGCTGATGCTGAAATGCAAGACATTGTCAACGAGTTTG
ATTTCAATGGAACTGGTGCTATTGATTTCAATGAGTTTCTTCAATTCATG
GCGAGAAGAGATGAATGGAGATGTGAAGAAGATATCAAAATTGTAAGAAT
TCTCCCGCCTTTAAGGCTTAATTACTGTTGTGCTTTCAACAGCAATTCTA
CGATGACATTTTTTAGAGGAGTAGATGTCTGCTTATTCTTTTTAAGTCAT
GAATTTCTTTCTCATGTTATAAAAAGGGTTCCTTTCAAGGTAGCCCTTAG
CTCAACCTTAATAACCTCAACCTGCCATCAGATCAAACAACAATATCAGG
AAAATTAGAAAAATTTCCATCGTGAATTATTGAAAGATCTTAGCTTTTCA
CCACGTTAATTCGCTCAAAGAACCCACGATGAAATTTTCTAATTTTCCAA
TAAACTTTCTTTTTTCAAATAACTAGTAATAAGAGTCACAGTAAGCTTGA
AATCTCGTGGACAAATTCTATTTCAACGTTGGTTTCCATAACAAACGGAC
TCAACAAAATAATATCATTTCATTATAGGCATTTAGTGTTTTTGACCCTG
ACAACGAAGGTTTCATTGACGTTCAAGAACTTCGTGAAATCATGCAGCGA
GATGAAGAGAATTTGACTGAAAAAGAGATCAAAGAGATTTTATCAGTGGT
CGACCAAGATGGAAATGGAAGAGTGGAATATAGTGGTAAGTCTTTCTTCA
TAATGTTGGAAGTCTTATCTTCAGTACCTTCAAGACCTATGCTCTATCAA
ACTGTTGAGTTGTGTTAATGGGAAAGCCTGTAGTGTAGCCTATGTAGACT
CAGTTACCTTTAGGTATCAACCTGAAGGGAGGGGTGGGCATGGCATTATT
ATAGTAGTGGTATGTCCATGGTATGTCGTAATATTGGTTTAATACAAATC
CTGCACCCCGGTCTCATTAAACAACGGGGTCTCTAATAAAGGGGGTTGAA
ACACTCCATTAAATTGACTAAATTGAGATAGTAACTCGATAATGAATTAA
TCCAAAAACCATTTCTTTTATTCATTGGTAGAGTTTGTACAATTGATGTT
GAACGACCATGATGAGGGCTAGAAAAACACGATGTTCAATTTGTATTCCA
TTAATGAGAGAGGTCAGGTGAACCCAATGGAAAAAAGTACCCGATGAAAA
AACACCTCAAGTATGCTTCCTAAATGTAGTCGAACGCTTGTAACTGTGCA
AATCAATGGAAAGTCAATTTACTAGATTGGTAAGACTCGTTGAACTGCAG
GACAGACGGATACAAAGCTTGGTTTGGAGGAAGTCTAATACCGCAATACA
TATTTTGGAGTTGGAACATATTTACATCCTCGCTTATACCTCAACGTTTT
TTGCATTGGGATTATCACCATGGAAATGAAATCATAACAAACATGAAAAA
ATACTTTCAAAACTTTCACGCGTCAATATTTAGTAAAACCAAGGAAATTT
GATAAATCCGATGAAAATATCATACGATTGAAGCTCTCTCATTCGATCTT
CTACTATTCGATTGATAGGCTCCATTATTCGATGATATTGAAATTTAACG
TCAAAAAGAAACACTCATAAACGACGCTCTGCCATTCAATAAGCTCCCTT
ATTCGATGAAAATCGAATAAGAGAGCGTCAACTGTATATCAACTTACGAA
GATTCTTCGATAAAACTCAACAAAAAAAATCTGTTGAGTCAACTTCCGTG
CTACTAACTATTTTTCTAAAAATATTTTCTAACGGCCACATGGTTATTAT
TTTTCACCAACGCGCGTGCGAATTGGAAGTCGAGAAACCTCCACCTACGG
CTGCTCTTAACCGCAAATTTATTAATTATGACCGTTAGAAAGTTTGTGAA
ATATTGCAAAACTCAATGTTGGCTTTATTACAAAGATTGGCTTCGATTGG
GCAGATTTGTTTTTTTATTGTGACCATTTTTTTAACCGACAATTTGGTAA
AGTTTTACCTTCCTAAACAATGACTTACAG Coding sequence (CDS) from alignment at sc0000095_pilon:638052..641331- >MSTRG.12554.1.p1 ID=MSTRG.12554.1.p1|Name=MSTRG.12554.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3132bp|location=Sequence derived from alignment at sc0000095_pilon:638052..641331- (Clytia hemisphaerica_ch_hm2_pilon)
AGTTTGTACAATTGATGTTGAACGACCATGATGAGGGCTAGGCATTTAGT
GTTTTTGACCCTGACAACGAAGGTTTCATTGACGTTCAAGAACTTCGTGA
AATCATGCAGCGAGATGAAGAGAATTTGACTGAAAAAGAGATCAAAGAGA
TTTTATCAGTGGTCGACCAAGATGGAAATGGAAGAGTGGAATATAGTGTT
AGTCTCAAAAATGGATCAAGAGTACGTGGAAGAATTGAAAGCAGCTTTCG
AACACGCTGACATCAATGATAGTGGTAATATCCAAACAAGTGAACTGGTT
ATTCTTCTGAAGAATCTGGGCGTGAACGTCGCTGATGCTGAAATGCAAGA
CATTGTCAACGAGTTTGATTTCAATGGAACTGGTGCTATTGATTTCAATG
AGTTTCTTCAATTCATGGCGAGAAGAGATGAATGGAGATGTGAAGAAGAT
ATCAAAATTTGTAAAAAAATGGATAAAACTACAATAGAGCTTGACACTTC
TAAGGTGCAGGAAAATCCGAATGCCATTGGAATGGGGGAAATGACCACAC
CAAAACTGCAAGATGAAAATCAAACTCCCTCATTGGTTGACAGGGAAAAA
AAGAAGATTTCAAGGGGGAAAGAAAAAATGGGGTCAAAACAAAGAAAAAA
CATTAAGCTGAAGGAGAATGTTGATGAAGTTCTTGCACCATCGCCAAAGA
AGAAAAGTGATAATGTCGCTGATGAAAATGATCGACTAAAGAAGAAAATA
CTTGAATTGACGTTTAGTCGTGACACAGGAGAGAGTTTGTACAATTGATG
TTGAACGACCATGATGAGGGCTAGGCATTTAGTGTTTTTGACCCTGACAA
CGAAGGTTTCATTGACGTTCAAGAACTTCGTGAAATCATGCAGCGAGATG
AAGAGAATTTGACTGAAAAAGAGATCAAAGAGATTTTATCAGTGGTCGAC
CAAGATGGAAATGGAAGAGTGGAATATAGTGTTAGTCTCAAAAATGGATC
AAGAGTACGTGGAAGAATTGAAAGCAGCTTTCGAACACGCTGACATCAAT
GATAGTGGTAATATCCAAACAAGTGAACTGGTTATTCTTCTGAAGAATCT
GGGCGTGAACGTCGCTGATGCTGAAATGCAAGACATTGTCAACGAGTTTG
ATTTCAATGGAACTGGTGCTATTGATTTCAATGAGTTTCTTCAATTCATG
GCGAGAAGAGATGAATGGAGATGTGAAGAAGATATCAAAATTTGTAAAAA
AATGGATAAAACTACAATAGAGCTTGACACTTCTAAGGTGCAGGAAAATC
CGAATGCCATTGGAATGGGGGAAATGACCACACCAAAACTGCAAGATGAA
AATCAAACTCCCTCATTGGTTGACAGGGAAAAAAAGAAGATTTCAAGGGG
GAAAGAAAAAATGGGGTCAAAACAAAGAAAAAACATTAAGCTGAAGGAGA
ATGTTGATGAAGTTCTTGCACCATCGCCAAAGAAGAAAAGTGATAATGTC
GCTGATGAAAATGATCGACTAAAGAAGAAAATACTTGAATTGACGTTTAG
TCGTGACACAGGAGAGAGTTTGTACAATTGATGTTGAACGACCATGATGA
GGGCTAGGCATTTAGTGTTTTTGACCCTGACAACGAAGGTTTCATTGACG
TTCAAGAACTTCGTGAAATCATGCAGCGAGATGAAGAGAATTTGACTGAA
AAAGAGATCAAAGAGATTTTATCAGTGGTCGACCAAGATGGAAATGGAAG
AGTGGAATATAGTGTTAGTCTCAAAAATGGATCAAGAGTACGTGGAAGAA
TTGAAAGCAGCTTTCGAACACGCTGACATCAATGATAGTGGTAATATCCA
AACAAGTGAACTGGTTATTCTTCTGAAGAATCTGGGCGTGAACGTCGCTG
ATGCTGAAATGCAAGACATTGTCAACGAGTTTGATTTCAATGGAACTGGT
GCTATTGATTTCAATGAGTTTCTTCAATTCATGGCGAGAAGAGATGAATG
GAGATGTGAAGAAGATATCAAAATTTGTAAAAAAATGGATAAAACTACAA
TAGAGCTTGACACTTCTAAGGTGCAGGAAAATCCGAATGCCATTGGAATG
GGGGAAATGACCACACCAAAACTGCAAGATGAAAATCAAACTCCCTCATT
GGTTGACAGGGAAAAAAAGAAGATTTCAAGGGGGAAAGAAAAAATGGGGT
CAAAACAAAGAAAAAACATTAAGCTGAAGGAGAATGTTGATGAAGTTCTT
GCACCATCGCCAAAGAAGAAAAGTGATAATGTCGCTGATGAAAATGATCG
ACTAAAGAAGAAAATACTTGAATTGACGTTTAGTCGTGACACAGGAGAGA
GTTTGTACAATTGATGTTGAACGACCATGATGAGGGCTAGGCATTTAGTG
TTTTTGACCCTGACAACGAAGGTTTCATTGACGTTCAAGAACTTCGTGAA
ATCATGCAGCGAGATGAAGAGAATTTGACTGAAAAAGAGATCAAAGAGAT
TTTATCAGTGGTCGACCAAGATGGAAATGGAAGAGTGGAATATAGTGTTA
GTCTCAAAAATGGATCAAGAGTACGTGGAAGAATTGAAAGCAGCTTTCGA
ACACGCTGACATCAATGATAGTGGTAATATCCAAACAAGTGAACTGGTTA
TTCTTCTGAAGAATCTGGGCGTGAACGTCGCTGATGCTGAAATGCAAGAC
ATTGTCAACGAGTTTGATTTCAATGGAACTGGTGCTATTGATTTCAATGA
GTTTCTTCAATTCATGGCGAGAAGAGATGAATGGAGATGTGAAGAAGATA
TCAAAATTTGTAAAAAAATGGATAAAACTACAATAGAGCTTGACACTTCT
AAGGTGCAGGAAAATCCGAATGCCATTGGAATGGGGGAAATGACCACACC
AAAACTGCAAGATGAAAATCAAACTCCCTCATTGGTTGACAGGGAAAAAA
AGAAGATTTCAAGGGGGAAAGAAAAAATGGGGTCAAAACAAAGAAAAAAC
ATTAAGCTGAAGGAGAATGTTGATGAAGTTCTTGCACCATCGCCAAAGAA
GAAAAGTGATAATGTCGCTGATGAAAATGATCGACTAAAGAAGAAAATAC
TTGAATTGACGTTTAGTCGTGACACAGGAGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000095_pilon | genome | sc0000095_pilon:638052..641331 - |
|
