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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000095_pilon:616895..624679+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12551.4.p1 ID=MSTRG.12551.4.p1|Name=MSTRG.12551.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7785bp|location=Sequence derived from alignment at sc0000095_pilon:616895..624679+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGAAATTGCAAAGCGCGGATGTGTTGTGTTAtatttcaagatggcggct
caaggcGAGGGAAATATCGGTGGGTATATTCCTCCAACTTTTCCCCAGAG
AAACGGTTATGAGCGAGAGACCCCGATCCTAGACTCAGGTCCAGATCATT
CAATGGAAGACATGATAAAAGAGGCAACTGATATGCAATCAGGATCGAGT
TTCAACCGATCCAGGCTTCGAATGCAAACTGATGAAGGTGTATCACCGTT
TCAACAACCTGCAGCGCAACCAAACTCTTCTTACTCCCTTTCTAGTAGTT
ACAAAGGTAGATTTCTCCTCTGACtaacatttttaatttaaaaggttttt
tactAACAATCATGCTCAGGTAAAAGATTTATAAGTCCTCTTGATTTTAG
ACTTTTAGTCAGTTTAGTTTAATATAATAAAGCAACAAACTCTGTCTAGG
ATGGTACTGTAGGGTGCAGGCCATATTTAAGAATCTAGCAAGACGAGGTG
TATTCTGTAGATAGCCTGATAGAACTGTATGTGCAATTTCCCATCTCAAA
AATGCGTTCTCTACTGAGATGACACTTACCTGGACAGCAGCCAGCAGCAC
CGAGATGAGAGACGGCCAGAGGCTGTAAGCACGACCCTGCTAATTCCTCG
TTGCGCGGCCCGCACGTTCAATCCCGGGTAAGTCTCAAAAAGAAATGTTA
AAATccacagtgcgtcacaaacagtcatataaacaaaactcaacattctc
acaaaagttgtcttttttatttcccaaacattcgtctaaagcgttcactt
ccacaataatttatgcaATTGCAATTTCGTTCAGTCCACAGTaatcggct
tcaacatatacacgtgtttttatttatgtgactgaagtgcctactaaaac
aatccgggggtgagtggcgaagcaacacagcagattattcataaaataaa
gaaatatcttttgacaaatgacaatcaaatataatgtattatattatatt
tcattattttttttcggtcaggcaaatgtctcgtattgggggttctagtc
ttgacccctatgcgagattgaagcgtttgggtaaacgagacaaaactcca
aaaaagctggtgttttgaagcgcttccgtgcaatcgaaatatcgctgttt
gtgacaCACTGATCCACGCAACAAGAAAATCCCAGGAGTCCGGGGAATTA
GCAGGGTCGTCCGTAAGCATGCAATTGCACTGCTGAAATTTACGCCTAGG
TGCAATTGCAGGTTTACAAATCCAGCCCAGGTTAAGATTGCTTGAGCAGA
TAAAAGAGTTCTCATTTTTAAAATCGTGCAAATGCAGTGAGGCggaaact
ttgatttttgaggattacgattttaccagttttttagcaatttttgcctt
gctaacccaaatcttgcaacatctttaccttaaggaagatcgtaattaga
gtttttcagcgctccgaaaaaaacgcatagcagaaattttttcatcttca
caggatcgattctcaacaacaaaatacatcttttggtctttgggtttgtt
tctgacgttttccttcaaagaatatcgatcactttccttttccccttgag
cttGAGCgcgtgagaaaaaaatgattagcttgcGTTTTGGCgagggcgaa
taaagatgaggcggcaatcttgcactgagggtgctacttagtttgcgccc
tattttgcgcccacgatagaatggtctaaacacgggggtattccaaatga
taaactatgtcattctgtaagtgtttattttctgagagatacaaatactG
TGAGttgtcctaaatccgacagccctgcctaattccgaccccccaaataa
ctgttattaaaaaaaattctatgtttacaaacactccctctccaagttga
acgatAaactattgcaagaactcttgaaacaaaacatccaACAATGGCTT
TAAAATGTCACGATGTTAAtcaatgtgataaaaaaagtgtgagttgtaaa
aattaTCAGCAATTttaaataattaccttttattctgaatccgttgttTG
TGTTTAAAATGTTAACAAATGTTATTTGATTTAATGGATTCAAtatatca
aatctttcagtttagttGACGCTTTGGTATCTGTGTTGCGccacagcaaa
aggtttgtttttattttagtttgtatctttgaaagaccccatcggaatta
ggcagggctgttggatttaggaccactcacggtagtatattgaatattat
taacttatttatttaagtatttttgagcgcaaatttaaatatatggttaa
ataaaaaacaaatgataacagttctgtttatcctcaaacccccgggaaaa
gttatTTTGcagacttagctattttacatatcttggaaaagaactcccat
agggattccgatacataacccgattggttaatttcggaacagcttcaaga
aagtcataatgacagataattttaaaggtttcagaggaaatgtgtgtaat
ttatcaatgttgatggcttgttgattttttaaagaaataagataacaggt
atagctttttctaatcctggattatcgaggttccagctacactgaaatAC
ATGGCCAAAAGGggaaaattctataaaaaattctgagcaagataAACCCA
AGGctttcaaaattcaacaaagtaGTCAGaagcaaataaagttttttcaa
atgaaagacTAGTTAAGCATGCATTTAGATGCTTACTGCTCATTCAGATT
TATAGTGAAAAGTGTGTAATTGCATCCAAAAATTCTTACATTTTCTATAG
CCATATAATTGCGCGTTTAGATCTCATAAGCTAAGGGTGCAATAATTGTT
TTAGAGAACGTGACAGCCTattaaataacaaattactccacatacattac
tttcccttagccaataaaaacgtgataaattatcttgtctctaggtaact
gttgtggagtaatCAGTTATTCAATAGGTCGTCgcattctccaaaacaac
tattaaGAAAGTTGAATtggggctattccaaaaaattcTACAGGGGTATT
GATTGAGGAACTTTTTCCTCCGACAAATATTGTCGGCCATTGCACTCAGT
CGAGTCAGGCCTGTTCTTCTTAAAATAGAATACAACACAATCTGCGTACA
GATGTGCAACCATATGCTTCAGATTGCATATTTTCGCCCGCgttccttta
gagctttagcataCTGGGCCAGAAAATGCACAATCTGCTCTGAGGTTATC
GGATACAAGGCCAAAAGCTTTATGTTATGAACTTTATAtttcaatgaaaa
caaaaataaagcttCTATGGTTTAAAACTACAAATGGTTGTTGGGacagg
gggggtcggtagtaaaatctcagacatatatgagtagtaaaaggattttt
acgaatttttacataccaccacccagactctttgAAGAGTTATTTTACTA
TCCTGgtagcaaacaactttccaacagaaaaatttttcaagttataaaaa
ttttcagatttttcagaaaagtcatccaaaaaattaaaagaattacaaaa
atagctaaaatatgctaattttaccagttttaactacccagatagtaaaa
ttttttcaacatttaacacgtagataccacccattttagtattaactaac
ctgggtagtaaaattgtttttgattttcgtcACActaccaccgtagtaaa
cgtcattatgtctgagattttactaccgaccccccccccccccccccacc
tggTTGGGATCAAATTGtaagaccaaattttagtgattttaaggAGGGGT
AGTGTCTAATAGCCAAAtgctaaaagggcatgaaaaaggAGACTGATCCC
TGATTTTGGCAAACAGATAAtgtttttcttccaaaattggGCTACAAACA
TTTTGGGAAttactgtgcaaaaaatctgaaaatctgtTGAGAAGAAAATA
GAAGAACCTGTTTTAAGCCGgctttcggctgttccggcgatttctAAGGA
GTTCCGggttgaaaaaatgatttttctggTAATCAAACCAACGATGCAAA
ACTTTGAGCATCACCATGAAATAGTTTTGTTTGTGAAGAAAGAATCAAGT
CAAGTAGATCAAGAGagatttcactttcgtttttatgtacttttaaaaga
ttactCACTTTTATACGGACTACCTTAGctgctgaaaaaaaaattgaaaa
ttcgaaatttaaGATTTGTGATGATGTGATGATGTTACATGTAGATATAG
CGCAATAAGTTTCAAGAAAGGTGTACTCTGAGTAGAAAGGGAAGGGCTCC
TGTCCATCCCACCCCgcatagaatgcacccccccctgaaaaatgctgagG
GCTGGATCCCTCTGGGACCCATCTGCACACTATGCCCCGTTCAAAACCCC
CTCTTTAGTCTGCATCAAAACCCCCAGCCTTAAGATTTAGGAAACTGCAT
TGGTCTCCATTTTACAGGGTGAGGCTCGAATTAGACTGAGGGAAAAGTTG
AGAAGGCAGCCTTCAACGAAGTGAATATAATGCAAGAAAAGTCCTTAACA
CATTGAGCTATGATTATTTCTAAAAGGGAAAATATCTTTCGAAAGTGCTA
AGGCTTCTATTCATATCTATTAGAACCCCAGATAACCTCGAATTATTCCC
AAAAGATGGGAAAAATGTTTGTGGTATTATGGTCGTTTTGGAGGCTACAT
TTTTCATACAGTCATTATTTTGAGgcgaatcaaaagttattgcacGTATA
CCCTGCAGTTTAGAGTAACAATATTGTTTAGTTAATTAAAAGCGGATTTG
ATATTATGATAGAGAGAAGTCCAAGCGAAAATCTCATTACATTCTATTAC
ATATAACATATAATAGCATAACCTAACATTCTTTACACTTTGCATTTCAC
TAAAACACTACTTACACAATTTCGCATACACGAAATATACTTACCATAAA
GGAGAAATTGACACTTGCTTTTTATGAAGGTTCTAAATCAAGCACGTATT
TTACTCATCAAACACCTCATACACGCAACGCAGTTTGTCAGTGTTTCTTT
TGTATCGCCAGAGAATGCATTTTACAAGATGTCTTGAATTTTCTCAACTG
GAAATCATGTCTGAAAAGATAGCGATATTTCCATAACCTGAGCAAAACTT
TGAACATCtcctatttttttttagattttcttgaccccctattttctata
gtttttcaaatatttttttcctttcattGTGGTAGATATATAGTTCCGTT
GAATTATTCGAACATCTTGTTCTGGTGATTCATACCCACGTGCCccctct
ctctctttctcttatTCCATCACAACACAAATTTCGTTATCTCAATATTT
GCGCTATAATAAGAGAGACTTCTGTTTGATCGATTTTTATCGCAACGAAG
GAAGAAAAAGAAGCTCTTTGTTCATGTCTATAATATTTCTATAAATGTGT
TAAgctcattttcttcaaaataatatAGTGTTTTTTACATTAAAAGATTC
TACACGTAATATTATAAGGTTCGTGTTGTGTGGCAGAGAATTTCATGTAG
AAGGGGGGAAAACATTAGAATTTTCACTGAACTAACTTGTCTGTCTTGAT
TTCTTCAGCGACTCCGAACACACTTCAATCACCTTTCGGAAATCCTCAAC
CACCATCGTCTTACAGCTCATCATCACACAATATGGCACCATCTGGCTAT
GGGAATCAACAACAGCAACCAGGAGGGTACAATGCTCCCCAACCTCAAGG
AACCCAACTGGTAAAGGGTGCTGATGCTGGCGTCAAATTAGAAGCTCTAA
AGAAATGGACCATGTCAACGTACAAATACACCAAACAGATGGTGTCCGAA
AAAATGGGCCGTCGAACACGGACCGTGGATACCGAATTGGAAAAACATAT
CCAAGGCTTAAAAGAAATGCAACTGCGCTACACCAATTTGTTAAAACTTT
CTAAACaatttcaaagtcaatttcaaaatattttggtcactCAAAAGCTG
ATGGGTGAAGCTTTCAATGAGCTAGCTGTCAAGTCTCCTGATTTGCAGGA
AGAATTTTCACAAAATGCTGAATTGCAGAAAGTCGTCTCTAAAAATGGTG
ACGCCTTGATTTCAGCTCTTACATTTTTCAACGAGAATCTTTGGACTTTA
TCGACTAAAACGATCGAGGACACGATTCAAACGATTCGAGATTACGAGAA
TTGTCGTATCGAGTATGATGCCTACCGGACGGATTTGGAAGCACATGAGG
CGGTCGGACAATCAATGAAAACGGAACAAGCTAGAAAAGAATTCAACGAG
CACAAAGAGAAATTCGAATCTTTACGAAACAATCttcaaattaaaatgaa
atttctcgAAGAGAATAAGGTAGGTTTTGGACGTTGATTCTCTCTTATAC
TACTATTATACACTCATTACCCCTCTCTTCTTTATCCagtcgttttttgt
ttttattttgcacTTTCTTAATACGTGTCTGGATACTCTTAGCTTATATT
TCTATCCTAACAGTGCGATTTATAATTACTtgttttttgatcatttttta
ctgataagttttttcacagattcgaaaagatttttttacgtttttcttgG
CTTTGCTGTTATAAACTTTGATTCCTTGAAATAACTTTAGGTGAAGGTAA
TGCGAAAACAATTATTGATTCTGCACAACGCCCTGGCTGCCTACTTTTCT
GGTAACAAGGACGAACTGGAAAAAACGATGAAAGAATTTCACATTCGTGT
CATGAACAAAGGCGAAGAAGCTTCCTTCCTTGAAACGCACTAAATTGAAC
TTGTTCCATTCAAAAAATCTTCTAGTTACGATAtgatatttttggatttt
gaaaccGGCATTAACTTTTTATTATGTAAAGAATTTTCACAAATTACTGG
TATTGAGGCAGGCTCTTTGcaggaaaaaaaaccgagtcAATTAAAATTGG
CATCTCTTACACTGGCCATTTTGATAACGACTCTTACGGTATTGCGCCGC
TGGTGAAAACCATATCATTGAATCACATATTTGAAGATGATGAACTTTCA
GGTTAACTAACCTAACCACTCACTGCACTTTGCCTACACGTGTATAATCA
ATCAAACTAGCattatcctatttatgtttggaattagataattttctcaa
tttttatggttttttaattattttcttggATACGTATTGAAAATTTATGA
GTGATTTTGGGTGACGTTTATGTTTTCCCCTTttgaaattaaatcaaatt
tgCTCAAAGAATAAGGCAAGAATTGTAAATCAACTTTCCGAATCGATTGT
CCGCTGCTTTAGATCACCGTCCAAGTTTCTTAGAACACAAATAAAAGATT
CTAAATCTCAGCTCAATAATATTTGTTATTCTGTTTCAGGCTAgtttgtg
tttctttttggtatttaatttatttcagattttgattgtttgtttctttc
ctccaccaaaatattttttgtgtcTTTGGATGTaaatattccaatttttt
tagaacaaataataattattataaagaaaacacATTTGTAAGCTTTCAAA
ATACTATTCTTGCCATCAGCTGAATTTTAGAAAGAATGGCGTTCTTTTTA
CCATTATTCTACACAATTCCGAGGGCCAAAGTCCGATGACGGAAAAAGGC
TCGAAAAAAGGTCTTATCCATgattactaaaaataaaaatgagtttCAGT
GGCACCGAGAACAAAGGAAGATACATAAAAAAGGAAGATTCTGTAATTTT
CATATGTAAAGCTGTGTTCTGTTCTATTCTATAAA Coding sequence (CDS) from alignment at sc0000095_pilon:616895..624679+ >MSTRG.12551.4.p1 ID=MSTRG.12551.4.p1|Name=MSTRG.12551.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1614bp|location=Sequence derived from alignment at sc0000095_pilon:616895..624679+ (Clytia hemisphaerica_ch_hm2_pilon)
atggcggctcaaggcGAGGGAAATATCGCGACTCCGAACACACTTCAATC
ACCTTTCGGAAATCCTCAACCACCATCGTCTTACAGCTCATCATCACACA
ATATGGCACCATCTGGCTATGGGAATCAACAACAGCAACCAGGAGGGTAC
AATGCTCCCCAACCTCAAGGAACCCAACTGGTAAAGGGTGCTGATGCTGG
CGTCAAATTAGAAGCTCTAAAGAAATGGACCATGTCAACGTACAAATACA
CCAAACAGATGGTGTCCGAAAAAATGGGCCGTCGAACACGGACCGTGGAT
ACCGAATTGGAAAAACATATCCAAGGCTTAAAAGAAATGCAACTGCGCTA
CACCAATTTGTTAAAACTTTCTAAACaatttcaaagtcaatttcaaaata
ttttggtcactCAAAAGCTGATGGGTGAAGCTTTCAATGAGCTAGCTGTC
AAGTCTCCTGATTTGCAGGAAGAATTTTCACAAAATGCTGAATTGCAGAA
AGTCGTCTCTAAAAATGGTGACGCCTTGATTTCAGCTCTTACATTTTTCA
ACGAGAATCTTTGGACTTTATCGACTAAAACGATCGAGGACACGATTCAA
ACGATTCGAGATTACGAGAATTGTCGTATCGAGTATGATGCCTACCGGAC
GGATTTGGAAGCACATGAGGCGGTCGGACAATCAATGAAAACGGAACAAG
CTAGAAAAGAATTCAACGAGCACAAAGAGAAATTCGAATCTTTACGAAAC
AATCttcaaattaaaatgaaatttctcgAAGAGAATAAGGTAGGTTTTGG
ACGTTGAatggcggctcaaggcGAGGGAAATATCGCGACTCCGAACACAC
TTCAATCACCTTTCGGAAATCCTCAACCACCATCGTCTTACAGCTCATCA
TCACACAATATGGCACCATCTGGCTATGGGAATCAACAACAGCAACCAGG
AGGGTACAATGCTCCCCAACCTCAAGGAACCCAACTGGTAAAGGGTGCTG
ATGCTGGCGTCAAATTAGAAGCTCTAAAGAAATGGACCATGTCAACGTAC
AAATACACCAAACAGATGGTGTCCGAAAAAATGGGCCGTCGAACACGGAC
CGTGGATACCGAATTGGAAAAACATATCCAAGGCTTAAAAGAAATGCAAC
TGCGCTACACCAATTTGTTAAAACTTTCTAAACaatttcaaagtcaattt
caaaatattttggtcactCAAAAGCTGATGGGTGAAGCTTTCAATGAGCT
AGCTGTCAAGTCTCCTGATTTGCAGGAAGAATTTTCACAAAATGCTGAAT
TGCAGAAAGTCGTCTCTAAAAATGGTGACGCCTTGATTTCAGCTCTTACA
TTTTTCAACGAGAATCTTTGGACTTTATCGACTAAAACGATCGAGGACAC
GATTCAAACGATTCGAGATTACGAGAATTGTCGTATCGAGTATGATGCCT
ACCGGACGGATTTGGAAGCACATGAGGCGGTCGGACAATCAATGAAAACG
GAACAAGCTAGAAAAGAATTCAACGAGCACAAAGAGAAATTCGAATCTTT
ACGAAACAATCttcaaattaaaatgaaatttctcgAAGAGAATAAGGTAG
GTTTTGGACGTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000095_pilon | genome | sc0000095_pilon:616895..624679 + |
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