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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000095_pilon:616893..624679+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12551.2.p1 ID=MSTRG.12551.2.p1|Name=MSTRG.12551.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7787bp|location=Sequence derived from alignment at sc0000095_pilon:616893..624679+ (Clytia hemisphaerica_ch_hm2_pilon)
ATCAGAAATTGCAAAGCGCGGATGTGTTGTGTTAtatttcaagatggcgg
ctcaaggcGAGGGAAATATCGGTGGGTATATTCCTCCAACTTTTCCCCAG
AGAAACGGTTATGAGCGAGAGACCCCGATCCTAGACTCAGGTCCAGATCA
TTCAATGGAAGACATGATAAAAGAGGCAACTGATATGCAATCAGGATCGA
GTTTCAACCGATCCAGGCTTCGAATGCAAACTGATGAAGGTGTATCACCG
TTTCAACAACCTGCAGCGCAACCAAACTCTTCTTACTCCCTTTCTAGTAG
TTACAAAGGTAGATTTCTCCTCTGACtaacatttttaatttaaaaggttt
tttactAACAATCATGCTCAGGTAAAAGATTTATAAGTCCTCTTGATTTT
AGACTTTTAGTCAGTTTAGTTTAATATAATAAAGCAACAAACTCTGTCTA
GGATGGTACTGTAGGGTGCAGGCCATATTTAAGAATCTAGCAAGACGAGG
TGTATTCTGTAGATAGCCTGATAGAACTGTATGTGCAATTTCCCATCTCA
AAAATGCGTTCTCTACTGAGATGACACTTACCTGGACAGCAGCCAGCAGC
ACCGAGATGAGAGACGGCCAGAGGCTGTAAGCACGACCCTGCTAATTCCT
CGTTGCGCGGCCCGCACGTTCAATCCCGGGTAAGTCTCAAAAAGAAATGT
TAAAATccacagtgcgtcacaaacagtcatataaacaaaactcaacattc
tcacaaaagttgtcttttttatttcccaaacattcgtctaaagcgttcac
ttccacaataatttatgcaATTGCAATTTCGTTCAGTCCACAGTaatcgg
cttcaacatatacacgtgtttttatttatgtgactgaagtgcctactaaa
acaatccgggggtgagtggcgaagcaacacagcagattattcataaaata
aagaaatatcttttgacaaatgacaatcaaatataatgtattatattata
tttcattattttttttcggtcaggcaaatgtctcgtattgggggttctag
tcttgacccctatgcgagattgaagcgtttgggtaaacgagacaaaactc
caaaaaagctggtgttttgaagcgcttccgtgcaatcgaaatatcgctgt
ttgtgacaCACTGATCCACGCAACAAGAAAATCCCAGGAGTCCGGGGAAT
TAGCAGGGTCGTCCGTAAGCATGCAATTGCACTGCTGAAATTTACGCCTA
GGTGCAATTGCAGGTTTACAAATCCAGCCCAGGTTAAGATTGCTTGAGCA
GATAAAAGAGTTCTCATTTTTAAAATCGTGCAAATGCAGTGAGGCggaaa
ctttgatttttgaggattacgattttaccagttttttagcaatttttgcc
ttgctaacccaaatcttgcaacatctttaccttaaggaagatcgtaatta
gagtttttcagcgctccgaaaaaaacgcatagcagaaattttttcatctt
cacaggatcgattctcaacaacaaaatacatcttttggtctttgggtttg
tttctgacgttttccttcaaagaatatcgatcactttccttttccccttg
agcttGAGCgcgtgagaaaaaaatgattagcttgcGTTTTGGCgagggcg
aataaagatgaggcggcaatcttgcactgagggtgctacttagtttgcgc
cctattttgcgcccacgatagaatggtctaaacacgggggtattccaaat
gataaactatgtcattctgtaagtgtttattttctgagagatacaaatac
tGTGAGttgtcctaaatccgacagccctgcctaattccgaccccccaaat
aactgttattaaaaaaaattctatgtttacaaacactccctctccaagtt
gaacgatAaactattgcaagaactcttgaaacaaaacatccaACAATGGC
TTTAAAATGTCACGATGTTAAtcaatgtgataaaaaaagtgtgagttgta
aaaattaTCAGCAATTttaaataattaccttttattctgaatccgttgtt
TGTGTTTAAAATGTTAACAAATGTTATTTGATTTAATGGATTCAAtatat
caaatctttcagtttagttGACGCTTTGGTATCTGTGTTGCGccacagca
aaaggtttgtttttattttagtttgtatctttgaaagaccccatcggaat
taggcagggctgttggatttaggaccactcacggtagtatattgaatatt
attaacttatttatttaagtatttttgagcgcaaatttaaatatatggtt
aaataaaaaacaaatgataacagttctgtttatcctcaaacccccgggaa
aagttatTTTGcagacttagctattttacatatcttggaaaagaactccc
atagggattccgatacataacccgattggttaatttcggaacagcttcaa
gaaagtcataatgacagataattttaaaggtttcagaggaaatgtgtgta
atttatcaatgttgatggcttgttgattttttaaagaaataagataacag
gtatagctttttctaatcctggattatcgaggttccagctacactgaaat
ACATGGCCAAAAGGggaaaattctataaaaaattctgagcaagataAACC
CAAGGctttcaaaattcaacaaagtaGTCAGaagcaaataaagttttttc
aaatgaaagacTAGTTAAGCATGCATTTAGATGCTTACTGCTCATTCAGA
TTTATAGTGAAAAGTGTGTAATTGCATCCAAAAATTCTTACATTTTCTAT
AGCCATATAATTGCGCGTTTAGATCTCATAAGCTAAGGGTGCAATAATTG
TTTTAGAGAACGTGACAGCCTattaaataacaaattactccacatacatt
actttcccttagccaataaaaacgtgataaattatcttgtctctaggtaa
ctgttgtggagtaatCAGTTATTCAATAGGTCGTCgcattctccaaaaca
actattaaGAAAGTTGAATtggggctattccaaaaaattcTACAGGGGTA
TTGATTGAGGAACTTTTTCCTCCGACAAATATTGTCGGCCATTGCACTCA
GTCGAGTCAGGCCTGTTCTTCTTAAAATAGAATACAACACAATCTGCGTA
CAGATGTGCAACCATATGCTTCAGATTGCATATTTTCGCCCGCgttcctt
tagagctttagcataCTGGGCCAGAAAATGCACAATCTGCTCTGAGGTTA
TCGGATACAAGGCCAAAAGCTTTATGTTATGAACTTTATAtttcaatgaa
aacaaaaataaagcttCTATGGTTTAAAACTACAAATGGTTGTTGGGaca
gggggggtcggtagtaaaatctcagacatatatgagtagtaaaaggattt
ttacgaatttttacataccaccacccagactctttgAAGAGTTATTTTAC
TATCCTGgtagcaaacaactttccaacagaaaaatttttcaagttataaa
aattttcagatttttcagaaaagtcatccaaaaaattaaaagaattacaa
aaatagctaaaatatgctaattttaccagttttaactacccagatagtaa
aattttttcaacatttaacacgtagataccacccattttagtattaacta
acctgggtagtaaaattgtttttgattttcgtcACActaccaccgtagta
aacgtcattatgtctgagattttactaccgacccccccccccccccccca
cctggTTGGGATCAAATTGtaagaccaaattttagtgattttaaggAGGG
GTAGTGTCTAATAGCCAAAtgctaaaagggcatgaaaaaggAGACTGATC
CCTGATTTTGGCAAACAGATAAtgtttttcttccaaaattggGCTACAAA
CATTTTGGGAAttactgtgcaaaaaatctgaaaatctgtTGAGAAGAAAA
TAGAAGAACCTGTTTTAAGCCGgctttcggctgttccggcgatttctAAG
GAGTTCCGggttgaaaaaatgatttttctggTAATCAAACCAACGATGCA
AAACTTTGAGCATCACCATGAAATAGTTTTGTTTGTGAAGAAAGAATCAA
GTCAAGTAGATCAAGAGagatttcactttcgtttttatgtacttttaaaa
gattactCACTTTTATACGGACTACCTTAGctgctgaaaaaaaaattgaa
aattcgaaatttaaGATTTGTGATGATGTGATGATGTTACATGTAGATAT
AGCGCAATAAGTTTCAAGAAAGGTGTACTCTGAGTAGAAAGGGAAGGGCT
CCTGTCCATCCCACCCCgcatagaatgcacccccccctgaaaaatgctga
gGGCTGGATCCCTCTGGGACCCATCTGCACACTATGCCCCGTTCAAAACC
CCCTCTTTAGTCTGCATCAAAACCCCCAGCCTTAAGATTTAGGAAACTGC
ATTGGTCTCCATTTTACAGGGTGAGGCTCGAATTAGACTGAGGGAAAAGT
TGAGAAGGCAGCCTTCAACGAAGTGAATATAATGCAAGAAAAGTCCTTAA
CACATTGAGCTATGATTATTTCTAAAAGGGAAAATATCTTTCGAAAGTGC
TAAGGCTTCTATTCATATCTATTAGAACCCCAGATAACCTCGAATTATTC
CCAAAAGATGGGAAAAATGTTTGTGGTATTATGGTCGTTTTGGAGGCTAC
ATTTTTCATACAGTCATTATTTTGAGgcgaatcaaaagttattgcacGTA
TACCCTGCAGTTTAGAGTAACAATATTGTTTAGTTAATTAAAAGCGGATT
TGATATTATGATAGAGAGAAGTCCAAGCGAAAATCTCATTACATTCTATT
ACATATAACATATAATAGCATAACCTAACATTCTTTACACTTTGCATTTC
ACTAAAACACTACTTACACAATTTCGCATACACGAAATATACTTACCATA
AAGGAGAAATTGACACTTGCTTTTTATGAAGGTTCTAAATCAAGCACGTA
TTTTACTCATCAAACACCTCATACACGCAACGCAGTTTGTCAGTGTTTCT
TTTGTATCGCCAGAGAATGCATTTTACAAGATGTCTTGAATTTTCTCAAC
TGGAAATCATGTCTGAAAAGATAGCGATATTTCCATAACCTGAGCAAAAC
TTTGAACATCtcctatttttttttagattttcttgaccccctattttcta
tagtttttcaaatatttttttcctttcattGTGGTAGATATATAGTTCCG
TTGAATTATTCGAACATCTTGTTCTGGTGATTCATACCCACGTGCCccct
ctctctctttctcttatTCCATCACAACACAAATTTCGTTATCTCAATAT
TTGCGCTATAATAAGAGAGACTTCTGTTTGATCGATTTTTATCGCAACGA
AGGAAGAAAAAGAAGCTCTTTGTTCATGTCTATAATATTTCTATAAATGT
GTTAAgctcattttcttcaaaataatatAGTGTTTTTTACATTAAAAGAT
TCTACACGTAATATTATAAGGTTCGTGTTGTGTGGCAGAGAATTTCATGT
AGAAGGGGGGAAAACATTAGAATTTTCACTGAACTAACTTGTCTGTCTTG
ATTTCTTCAGCGACTCCGAACACACTTCAATCACCTTTCGGAAATCCTCA
ACCACCATCGTCTTACAGCTCATCATCACACAATATGGCACCATCTGGCT
ATGGGAATCAACAACAGCAACCAGGAGGGTACAATGCTCCCCAACCTCAA
GGAACCCAACTGGTAAAGGGTGCTGATGCTGGCGTCAAATTAGAAGCTCT
AAAGAAATGGACCATGTCAACGTACAAATACACCAAACAGATGGTGTCCG
AAAAAATGGGCCGTCGAACACGGACCGTGGATACCGAATTGGAAAAACAT
ATCCAAGGCTTAAAAGAAATGCAACTGCGCTACACCAATTTGTTAAAACT
TTCTAAACaatttcaaagtcaatttcaaaatattttggtcactCAAAAGC
TGATGGGTGAAGCTTTCAATGAGCTAGCTGTCAAGTCTCCTGATTTGCAG
GAAGAATTTTCACAAAATGCTGAATTGCAGAAAGTCGTCTCTAAAAATGG
TGACGCCTTGATTTCAGCTCTTACATTTTTCAACGAGAATCTTTGGACTT
TATCGACTAAAACGATCGAGGACACGATTCAAACGATTCGAGATTACGAG
AATTGTCGTATCGAGTATGATGCCTACCGGACGGATTTGGAAGCACATGA
GGCGGTCGGACAATCAATGAAAACGGAACAAGCTAGAAAAGAATTCAACG
AGCACAAAGAGAAATTCGAATCTTTACGAAACAATCttcaaattaaaatg
aaatttctcgAAGAGAATAAGGTAGGTTTTGGACGTTGATTCTCTCTTAT
ACTACTATTATACACTCATTACCCCTCTCTTCTTTATCCagtcgtttttt
gtttttattttgcacTTTCTTAATACGTGTCTGGATACTCTTAGCTTATA
TTTCTATCCTAACAGTGCGATTTATAATTACTtgttttttgatcattttt
tactgataagttttttcacagattcgaaaagatttttttacgtttttctt
gGCTTTGCTGTTATAAACTTTGATTCCTTGAAATAACTTTAGGTGAAGGT
AATGCGAAAACAATTATTGATTCTGCACAACGCCCTGGCTGCCTACTTTT
CTGGTAACAAGGACGAACTGGAAAAAACGATGAAAGAATTTCACATTCGT
GTCATGAACAAAGGCGAAGAAGCTTCCTTCCTTGAAACGCACTAAATTGA
ACTTGTTCCATTCAAAAAATCTTCTAGTTACGATAtgatatttttggatt
ttgaaaccGGCATTAACTTTTTATTATGTAAAGAATTTTCACAAATTACT
GGTATTGAGGCAGGCTCTTTGcaggaaaaaaaaccgagtcAATTAAAATT
GGCATCTCTTACACTGGCCATTTTGATAACGACTCTTACGGTATTGCGCC
GCTGGTGAAAACCATATCATTGAATCACATATTTGAAGATGATGAACTTT
CAGGTTAACTAACCTAACCACTCACTGCACTTTGCCTACACGTGTATAAT
CAATCAAACTAGCattatcctatttatgtttggaattagataattttctc
aatttttatggttttttaattattttcttggATACGTATTGAAAATTTAT
GAGTGATTTTGGGTGACGTTTATGTTTTCCCCTTttgaaattaaatcaaa
tttgCTCAAAGAATAAGGCAAGAATTGTAAATCAACTTTCCGAATCGATT
GTCCGCTGCTTTAGATCACCGTCCAAGTTTCTTAGAACACAAATAAAAGA
TTCTAAATCTCAGCTCAATAATATTTGTTATTCTGTTTCAGGCTAgtttg
tgtttctttttggtatttaatttatttcagattttgattgtttgtttctt
tcctccaccaaaatattttttgtgtcTTTGGATGTaaatattccaatttt
tttagaacaaataataattattataaagaaaacacATTTGTAAGCTTTCA
AAATACTATTCTTGCCATCAGCTGAATTTTAGAAAGAATGGCGTTCTTTT
TACCATTATTCTACACAATTCCGAGGGCCAAAGTCCGATGACGGAAAAAG
GCTCGAAAAAAGGTCTTATCCATgattactaaaaataaaaatgagtttCA
GTGGCACCGAGAACAAAGGAAGATACATAAAAAAGGAAGATTCTGTAATT
TTCATATGTAAAGCTGTGTTCTGTTCTATTCTATAAA Coding sequence (CDS) from alignment at sc0000095_pilon:616893..624679+ >MSTRG.12551.2.p1 ID=MSTRG.12551.2.p1|Name=MSTRG.12551.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3537bp|location=Sequence derived from alignment at sc0000095_pilon:616893..624679+ (Clytia hemisphaerica_ch_hm2_pilon)
atggcggctcaaggcGAGGGAAATATCGGTGGGTATATTCCTCCAACTTT
TCCCCAGAGAAACGGTTATGAGCGAGAGACCCCGATCCTAGACTCAGGTC
CAGATCATTCAATGGAAGACATGATAAAAGAGGCAACTGATATGCAATCA
GGATCGAGTTTCAACCGATCCAGGCTTCGAATGCAAACTGATGAAGGTGT
ATCACCGTTTCAACAACCTGCAGCGCAACCAAACTCTTCTTACTCCCTTT
CTAGTAGTTACAAAGCGACTCCGAACACACTTCAATCACCTTTCGGAAAT
CCTCAACCACCATCGTCTTACAGCTCATCATCACACAATATGGCACCATC
TGGCTATGGGAATCAACAACAGCAACCAGGAGGGTACAATGCTCCCCAAC
CTCAAGGAACCCAACTGGTAAAGGGTGCTGATGCTGGCGTCAAATTAGAA
GCTCTAAAGAAATGGACCATGTCAACGTACAAATACACCAAACAGATGGT
GTCCGAAAAAATGGGCCGTCGAACACGGACCGTGGATACCGAATTGGAAA
AACATATCCAAGGCTTAAAAGAAATGCAACTGCGCTACACCAATTTGTTA
AAACTTTCTAAACaatttcaaagtcaatttcaaaatattttggtcactCA
AAAGCTGATGGGTGAAGCTTTCAATGAGCTAGCTGTCAAGTCTCCTGATT
TGCAGGAAGAATTTTCACAAAATGCTGAATTGCAGAAAGTCGTCTCTAAA
AATGGTGACGCCTTGATTTCAGCTCTTACATTTTTCAACGAGAATCTTTG
GACTTTATCGACTAAAACGATCGAGGACACGATTCAAACGATTCGAGATT
ACGAGAATTGTCGTATCGAGTATGATGCCTACCGGACGGATTTGGAAGCA
CATGAGGCGGTCGGACAATCAATGAAAACGGAACAAGCTAGAAAAGAATT
CAACGAGCACAAAGAGAAATTCGAATCTTTACGAAACAATCttcaaatta
aaatgaaatttctcgAAGAGAATAAGGTGAAGGTAATGCGAAAACAATTA
TTGATTCTGCACAACGCCCTGGCTGCCTACTTTTCTGGTAACAAGGACGA
ACTGGAAAAAACGATGAAAGAATTTCACATTCGTGTCATGAACAAAGGCG
AAGAAGCTTCCTTCCTTGAAACGCACTAAatggcggctcaaggcGAGGGA
AATATCGGTGGGTATATTCCTCCAACTTTTCCCCAGAGAAACGGTTATGA
GCGAGAGACCCCGATCCTAGACTCAGGTCCAGATCATTCAATGGAAGACA
TGATAAAAGAGGCAACTGATATGCAATCAGGATCGAGTTTCAACCGATCC
AGGCTTCGAATGCAAACTGATGAAGGTGTATCACCGTTTCAACAACCTGC
AGCGCAACCAAACTCTTCTTACTCCCTTTCTAGTAGTTACAAAGCGACTC
CGAACACACTTCAATCACCTTTCGGAAATCCTCAACCACCATCGTCTTAC
AGCTCATCATCACACAATATGGCACCATCTGGCTATGGGAATCAACAACA
GCAACCAGGAGGGTACAATGCTCCCCAACCTCAAGGAACCCAACTGGTAA
AGGGTGCTGATGCTGGCGTCAAATTAGAAGCTCTAAAGAAATGGACCATG
TCAACGTACAAATACACCAAACAGATGGTGTCCGAAAAAATGGGCCGTCG
AACACGGACCGTGGATACCGAATTGGAAAAACATATCCAAGGCTTAAAAG
AAATGCAACTGCGCTACACCAATTTGTTAAAACTTTCTAAACaatttcaa
agtcaatttcaaaatattttggtcactCAAAAGCTGATGGGTGAAGCTTT
CAATGAGCTAGCTGTCAAGTCTCCTGATTTGCAGGAAGAATTTTCACAAA
ATGCTGAATTGCAGAAAGTCGTCTCTAAAAATGGTGACGCCTTGATTTCA
GCTCTTACATTTTTCAACGAGAATCTTTGGACTTTATCGACTAAAACGAT
CGAGGACACGATTCAAACGATTCGAGATTACGAGAATTGTCGTATCGAGT
ATGATGCCTACCGGACGGATTTGGAAGCACATGAGGCGGTCGGACAATCA
ATGAAAACGGAACAAGCTAGAAAAGAATTCAACGAGCACAAAGAGAAATT
CGAATCTTTACGAAACAATCttcaaattaaaatgaaatttctcgAAGAGA
ATAAGGTGAAGGTAATGCGAAAACAATTATTGATTCTGCACAACGCCCTG
GCTGCCTACTTTTCTGGTAACAAGGACGAACTGGAAAAAACGATGAAAGA
ATTTCACATTCGTGTCATGAACAAAGGCGAAGAAGCTTCCTTCCTTGAAA
CGCACTAAatggcggctcaaggcGAGGGAAATATCGGTGGGTATATTCCT
CCAACTTTTCCCCAGAGAAACGGTTATGAGCGAGAGACCCCGATCCTAGA
CTCAGGTCCAGATCATTCAATGGAAGACATGATAAAAGAGGCAACTGATA
TGCAATCAGGATCGAGTTTCAACCGATCCAGGCTTCGAATGCAAACTGAT
GAAGGTGTATCACCGTTTCAACAACCTGCAGCGCAACCAAACTCTTCTTA
CTCCCTTTCTAGTAGTTACAAAGCGACTCCGAACACACTTCAATCACCTT
TCGGAAATCCTCAACCACCATCGTCTTACAGCTCATCATCACACAATATG
GCACCATCTGGCTATGGGAATCAACAACAGCAACCAGGAGGGTACAATGC
TCCCCAACCTCAAGGAACCCAACTGGTAAAGGGTGCTGATGCTGGCGTCA
AATTAGAAGCTCTAAAGAAATGGACCATGTCAACGTACAAATACACCAAA
CAGATGGTGTCCGAAAAAATGGGCCGTCGAACACGGACCGTGGATACCGA
ATTGGAAAAACATATCCAAGGCTTAAAAGAAATGCAACTGCGCTACACCA
ATTTGTTAAAACTTTCTAAACaatttcaaagtcaatttcaaaatattttg
gtcactCAAAAGCTGATGGGTGAAGCTTTCAATGAGCTAGCTGTCAAGTC
TCCTGATTTGCAGGAAGAATTTTCACAAAATGCTGAATTGCAGAAAGTCG
TCTCTAAAAATGGTGACGCCTTGATTTCAGCTCTTACATTTTTCAACGAG
AATCTTTGGACTTTATCGACTAAAACGATCGAGGACACGATTCAAACGAT
TCGAGATTACGAGAATTGTCGTATCGAGTATGATGCCTACCGGACGGATT
TGGAAGCACATGAGGCGGTCGGACAATCAATGAAAACGGAACAAGCTAGA
AAAGAATTCAACGAGCACAAAGAGAAATTCGAATCTTTACGAAACAATCt
tcaaattaaaatgaaatttctcgAAGAGAATAAGGTGAAGGTAATGCGAA
AACAATTATTGATTCTGCACAACGCCCTGGCTGCCTACTTTTCTGGTAAC
AAGGACGAACTGGAAAAAACGATGAAAGAATTTCACATTCGTGTCATGAA
CAAAGGCGAAGAAGCTTCCTTCCTTGAAACGCACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000095_pilon | genome | sc0000095_pilon:616893..624679 + |
|
