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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000095_pilon:398489..404664+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12534.1.p1 ID=MSTRG.12534.1.p1|Name=MSTRG.12534.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6176bp|location=Sequence derived from alignment at sc0000095_pilon:398489..404664+ (Clytia hemisphaerica_ch_hm2_pilon)
AGTGCGGTTACGCCCGAGAATACACCTAACGCCACAAACGCCCAATTGTT
CGGCAATATCAAGAGTTCGGTAAAATACCTGAAcgtaatcaaaacattcg
atttcaaaaacatgagaaaagaaaataagtttttgTCAAAGCTGAAGCCG
TTGTTTTTGAACTGCAATTGACTTTCAAAGGTCATTTTACATAGAGAAGC
ATGCTTGTATAACACATCATTATAATGCATCAAAAAATGGGAAGACCTGA
AAGCAGCAAAACTCATAGTAAAAATGGAAGAAGCACTTATAGACGATCAC
TTCTTGGAAGTAGCACACTCGCAAtttttttACAACCAACTTTTTTGGCA
AGAAATttatcttcatcttcttctccCAAAACACCTGATGAAGAAAAGGA
GAACAAAGAAGTTTCAGCAGAGAAGATATTCAGCCTTCTAAAAGATGCTA
ATAAAATTATGGTCAAAGGTgccaaactttttgaaagtttaaacgAACTG
AAGCTCTGTGGTTGGATAAACCCTTACACATTGTTGTTAAGTGGAGTTTC
TGAAGATATGAAACTTGTGAAACGCGCTTGGATCAAGAGACATTTGAAAA
ACCCTGAAAACTACTTCATCAAAGATATTGGTAAGAAATACAAAAGTGTC
TGTGTTTAAATTAAACATATTCTAAACGTTTAGAATAATGATATGATAAT
TTTTACAACATGTTCTTAGATTTAGTGGTTGTTGTGCAGTGATGGATTTT
TCTCTTCCTCTAAATTTCTCTATTTGAGTGTCAAAAGTACTTTAAAGAAC
AGATCAGGCTTCAGGAAACAGGGCAGAGTAGAAAAGGAGCAATTAGAGAT
AGAGATTTTAAGCTATCATACAGTTTTTTACTGTTACTTATAGGAGAGTG
GgaaaatatcaattttcttttgaaattacaCATGCTACTATCAGATAAAA
ACTATTCTTAGACAGTATATCTTATTAAAAGATTTTAGTAAGTcctaatt
ttcaaataatttgcaGAGATATGAAATTTGTAATTTAGTTAAAGTGGGTA
GGAGATTAGAATTATTGCAATAAGGTGAGGATTATAATTAATGTAATGGT
ATCTTGCTGATTAACGTCCCATTACTTTCTTTTGATTCTTTAGGTATATC
GAGATATTTGATAACATATAAGCTTTAAACTTCACTGTGTGACATGGTTC
TTGATAAatattttaagtaactttttcatCAACTTTTACTGTAGAATAGA
GTACCAATGATACAAGCTTTAAGTCAAATAATTAGTTTTCTGGGTGAACT
TTGTTACAATAGACATATAAGTGTCATTCTTATAAGTTAAGCACTTTTCT
GTGGTTTTTTCTTGAGGGAAGTGATTGATGCCTATGTTTCCTTTGGCAAA
TCTGTATTAAATAACAAACTCCCTATAATGAGAAAGGAAGGAAtgctatt
tttgttttatttacacAACGGTTTCCTTTcataaacaaactttaaaaatc
TCAGATGCTTTAAAGGATGTAGATATGgaaacatcaaaacaatgtATTTA
AAACACAAGGTATACCACAGCATTTCTTATGTTTAAATACATTTTTCCAT
GCACAGCATTGATATATGTATTCTAGTTGGATTGAAATATGAGGAATGAA
ATTATCAACAGACAGAAAAGGGCTATCAATTTCACAGAGTTTGTCAAAAA
TCAATTCATATTTCAAATTCACACATCTCTGAAAATGATCAGGCTTTTCA
TTGACTCATGAAATTTTAATGTTAAAAGGATTGCATAGAAATGACAAATA
TTATAATAAGCTTGGCTCCTCCAGATGTCTCAGggaattatgaaaaaata
tttcatccataaaacaaataaattctttgattttttatttgaattttaga
TAACTTCCTTCCCTATTTtacattttaccaaaaaaaaaaggtaaataaaa
gAGTTTAGAGAAAGGGAAATTTACTCTCCCCTGCTGATCCTTTCTGAGAT
TCCCAGTTAGTTTCAGGAGATCTatctttatttcttttgaaatgaaCACT
CTACAAAATGCACAAATTTTTATCTGTACATACAATGTCAAGTTTGTCTC
CACCGTAACTCAATCTTTTAATCTCACGTCTAGTATCATAAACTAAAAAC
CTACAAATAGTTTATTTgtggatgaaaaaaaaacctcGAGTGCAATTAAA
AAAGTATCTAGAATTCTTTAATATGAGAATTTGGTTTGGAATAATATCAC
ATTGGCTTTTCAGAATTTGGAATTTAAATCTTGGTGAATAAATCAAGCGA
TCTCAGTTTATATAACGGGTTGGCTAATGCTTTAAAAGTCaacatgatga
aaatatctCACATCTTATAATCACTCAGGAAACATCAAATTCGACACTAC
GTTACATTTTCTCACTTTGTCTTTATTGTCGAGAtcgattttttctttct
cttgtaTCTCCTCCCTTTCTTTCAgttttgaagttgaaaaatataagatg
ATTCTTTTCATACTAAATTGTGCTATTTTTAAGAAGCCGAGAgtaaaaaa
tcgctagcgagAGAAAGTCGTCTATCCGtttagacattttttaaaatact
ATGACAAATTTTGATCTTATCAGAAAATTAATTCGAAGCTATCTGTCCTG
ATGATCGTGACTTTCATCTTAATCCTACTTGACCTTTTCTTACGTAAGGG
ATTTACatttggaatttcaaaaaattcttctcGGTAGACAGACAAATGAA
ATCAGGGAAAAACATGTTTACTTTTCCCTGGGCAAGCAAAAAATGAACCG
AACTCTGGTTCacagaatttttctcaaatcccGTTCCAAAAAACATTTGA
TATTTCGGGGAATTTCGCAATCAAATGCTGCACTACTTGCAAACTTTGCA
GTATTACTTTTTGCAGAGGAAACTATGTATAATCTTTTTAACTGTATTGA
AAATATGTGTGCTGATTTAGGATGCCAACTAGGTTAGATTTTCTGATTGC
TAAATGCATCGAGTTCAGTTGTTTAACTGGTCTTTCCATTCCGGTAGTGG
AATAATCTTGGGTACTTGACAAAAACTGGAGTCTACTGTAAGAATTTCTC
TAGAATGGAATAGTTTAAGCTTAGCCTAGCCAAAATATTGTGGTCAATGG
AGAATGTCAGCGTCTAGAATGAACGGAGTCCAGTTGATTAGTTTTAATTA
CACCCAGTATCTATTATTTCCTTTGATAATTACGGCTCTGCGGTAGATGA
CAACATAATGCATTGCTTCTTGCCGgcattttatattttgttcaatggaa
tttttcttgcttttgaCTGATTAGTTGTACTCTGTTTATATGAATGAACT
AGTAATTACATTTCAATTATGATATTTCTCCCTTACAATAATTTTGAGTT
GTTCTTAAGTATAccgataaattttctttttgctacTTTACTCAGATTAA
TTATGGAGATTTCATATCAGAAGCCAAAAGttttttcggatattttcaca
aattagtgttgtttttttatttcgcgtagatttaattttttgaaccagca
aaaaaaatttatcatataGTATTGGCCCTGGCCCAGTTTATTTTATTTAC
GTTGAAAATCCGATTTTGGATATTTCATGTGGATTTGATTTCGCGAGTCA
GCGCTTTCACGAGATTTGTTCTGTTCGTGAAAGCGTGCGAAATTAAATAT
GATTGAAGTGGACTTTTTCCTTGGACTTTTTCCTTGGACTTTATATAAAC
CGAAACTGTAAATCCTTCAATAGCTTTAACATCCCTGTCTGATTGATCGG
TTTGATAAATTTTCCAGTAGTGGTGATTCTATATTTTACAGTGATGGTAT
AGAATTCAACAGCGTTTATTTTATGGTGATTTCGCGATCGTTGGTCACCA
GCCCTCTTCCGAATGTAATTGATTTGCTTTAACGCGGTGGGAAGCGCGCT
AatgttaaatttattttaatgaaagcGGTCTTTTGTATAAGAAGTTTGTT
TTCGTTCCGCTAAGAGGGTAATTTTTGAACCAAGGAGACGACTGGATTAA
CATCTATAAGACACTATCAAATATTTGTTTATTTCATAATGAGgtgaaaa
aaactcaaaaagtgatACTTATTATGTAGAGACAATTTGATTTTGATGTC
AAAACAATGTTTTAAAAACGCAGGGGAAAATGTTTTCTATCATAAAAAAT
TAGCTGAAGAAAAAACGGTACAGTTCATTTTTCGTTGTTCAATTTTAGGA
ATTATTCGTGATTGCGTCGTCGAGATGATCCCTCAATCGCCCTTCATGTC
GTTAACCACCGCCTTGTTCGAAGCCGTCGCCGATCTCAACCATCAAAACA
TATTTCCAACCAAAGACATCCTTCACGAATATCTACGTAAACATTACCCT
GAGATTAAGACTCCCGATACGAAGATCATACATGAATGCTTAGGGAGACT
GATCAAGAATCGAAGGTTATATCATAACGGGCGTGGTTACTTTATCTTGT
TTAATGAGAATGTTCTCAATGAAGTTATCTCATTGAAATCAAGTTTAAAA
CCTTTAACAAACGACACCACAAGCCTTGAACCTTCCATTATCGGGTTTAA
AATGATGGACTCGCGTACTTCAAGCTCTGGACAAACTGACGGCCATACTG
ACCTTCCAACTGATTTAGATCATCGCTCACAAGGAGGAGACGTTTATCAA
AACATTCAACGACATCAAAGTGTTGATACTTTGACAGAAGTCACAGCACT
AGCTGATGGCGTGGCTAATATATCTGAATTATACACGCCCAAATTACACA
GGACCTCATTTGGAGGGAAATTGTTTCGCaaaaacaacaataaagcagaa
aaaggagcgatcgaaaaaacacataaaaacCACGCGAAGATGTTTTCGTG
TAGCACTGCAACTGATAGTATTATTCTCTCTAATGATCTAATCAATACGC
CCTCGCGTGTTCCCATTGTTCAGGGAACAGAAACAATGACCATTCAAAAC
AAAGACGTTCTTGACAGTGCAACCATGAGCGACGTCACAGACGTTCAGAG
TCCGTCAATGTCTGGTCGTCGTCGCAAAGTCAAACGAAGCAAAAGTTTCG
GTGGCAAAAATCGTCGTGAACCACGAACTTCCTCAAATAAGGAGGTTTCG
TTTGCGTTGATCGGCTCACCGAGAGATAGCAACGGTTCAAACGACGACGA
ATATCCAAAACGTTTTCAAAGAAGCCACTCTTTCGGTGTGGGTTACCATA
GAGATAAATACCAACGACCCTCGTTTTCTGAACGGCCCACTATCGCACGT
GCAGAAAATATTAAACTTTCAACGACTTCGAATAATACATGTAGTTCCAA
TGAAAATACTTTCGACCACACTTTCGTGACGGAACTAGATGAGACGTACG
ACGACATAGAACCGTCTTTTGTTGACGATAATATACCGGTGTTCGATGAT
GGACCCGAACTCTCTCATAGACCGGATATGTTGCCCGTTGTTGATACATC
GACTTTCGAAACGTTAGAGAATTATAAAGACCTTGGAAGTGCGTTGAGTT
TACCACGCATAAATGATAAAGGGATCAATTTTAACATGGTAGATTTGCTA
TCACCGACAAAGGAGGAATGTTTAGCGGAAGAATTGAAACAAGCTGGAGA
GGTGGATATAGATTCTTTGGAAAAAGAGACGAGACTTTTGAGTCCTCGAT
CACGCAAGAAACACGGAACGCCTTACGAAAGTCAGTACATTACAGAAGCT
GTCGATCAAAGTGAAGAGATATGTCAAGCTCTTGAGGACAGCAAAAGGGA
TAAGAATTCGAACTACCTTTCTGATAGAAGTTCAACAACACCGACAGGTA
GCAAAAGCAGTAAATCTACCAAAGGTGTCAAAATGAGGAATCGATCCAAA
TCAAGCGAAGATGAACGTAAACGAAATCAAAAGGAGCGAAATTCGTTATT
ATTTGAAGAGAAACGACCCTCACTCAAAGTGATGGGGATGGTATAATTTA
TTCTAATTTATGACaaaacaatttatttattttctggGATAACTATAATT
TTAGCAGGCAATttagttttgtatatatttaaaGCGAAAAATTAGAAGTT
AAATCTAATCTTCACATTAAGGAATTCATCACTTTATTCTCCATGGTTTT
GGTGGAATACCTGAAGATCACATTAT Coding sequence (CDS) from alignment at sc0000095_pilon:398489..404664+ >MSTRG.12534.1.p1 ID=MSTRG.12534.1.p1|Name=MSTRG.12534.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4308bp|location=Sequence derived from alignment at sc0000095_pilon:398489..404664+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATCAAAAAATGGGAAGACCTGAAAGCAGCAAAACTCATAGTAAAAA
TGGAAGAAGCACTTATAGACGATCACTTCTTGGAAGTAGCACACTCGCAA
tttttttACAACCAACTTTTTTGGCAAGAAATttatcttcatcttcttct
ccCAAAACACCTGATGAAGAAAAGGAGAACAAAGAAGTTTCAGCAGAGAA
GATATTCAGCCTTCTAAAAGATGCTAATAAAATTATGGTCAAAGGTgcca
aactttttgaaagtttaaacgAACTGAAGCTCTGTGGTTGGATAAACCCT
TACACATTGTTGTTAAGTGGAGTTTCTGAAGATATGAAACTTGTGAAACG
CGCTTGGATCAAGAGACATTTGAAAAACCCTGAAAACTACTTCATCAAAG
ATATTGGAATTATTCGTGATTGCGTCGTCGAGATGATCCCTCAATCGCCC
TTCATGTCGTTAACCACCGCCTTGTTCGAAGCCGTCGCCGATCTCAACCA
TCAAAACATATTTCCAACCAAAGACATCCTTCACGAATATCTACGTAAAC
ATTACCCTGAGATTAAGACTCCCGATACGAAGATCATACATGAATGCTTA
GGGAGACTGATCAAGAATCGAAGGTTATATCATAACGGGCGTGGTTACTT
TATCTTGTTTAATGAGAATGTTCTCAATGAAGTTATCTCATTGAAATCAA
GTTTAAAACCTTTAACAAACGACACCACAAGCCTTGAACCTTCCATTATC
GGGTTTAAAATGATGGACTCGCGTACTTCAAGCTCTGGACAAACTGACGG
CCATACTGACCTTCCAACTGATTTAGATCATCGCTCACAAGGAGGAGACG
TTTATCAAAACATTCAACGACATCAAAGTGTTGATACTTTGACAGAAGTC
ACAGCACTAGCTGATGGCGTGGCTAATATATCTGAATTATACACGCCCAA
ATTACACAGGACCTCATTTGGAGGGAAATTGTTTCGCaaaaacaacaata
aagcagaaaaaggagcgatcgaaaaaacacataaaaacCACGCGAAGATG
TTTTCGTGTAGCACTGCAACTGATAGTATTATTCTCTCTAATGATCTAAT
CAATACGCCCTCGCGTGTTCCCATTGTTCAGGGAACAGAAACAATGACCA
TTCAAAACAAAGACGTTCTTGACAGTGCAACCATGAGCGACGTCACAGAC
GTTCAGAGTCCGTCAATGTCTGGTCGTCGTCGCAAAGTCAAACGAAGCAA
AAGTTTCGGTGGCAAAAATCGTCGTGAACCACGAACTTCCTCAAATAAGG
AGGTTTCGTTTGCGTTGATCGGCTCACCGAGAGATAGCAACGGTTCAAAC
GACGACGAATATCCAAAACGTTTTCAAAGAAGCCACTCTTTCGGTGTGGG
TTACCATAGAGATAAATACCAACGACCCTCGTTTTCTGAACGGCCCACTA
TCGCACGTGCAGAAAATATTAAACTTTCAACGACTTCGAATAATACATGT
AGTTCCAATGAAAATACTTTCGACCACACTTTCGTGACGGAACTAGATGA
GACGTACGACGACATAGAACCGTCTTTTGTTGACGATAATATACCGGTGT
TCGATGATGGACCCGAACTCTCTCATAGACCGGATATGTTGCCCGTTGTT
GATACATCGACTTTCGAAACGTTAGAGAATTATAAAGACCTTGGAAGTGC
GTTGAGTTTACCACGCATAAATGATAAAGGGATCAATTTTAACATGGTAG
ATTTGCTATCACCGACAAAGGAGGAATGTTTAGCGGAAGAATTGAAACAA
GCTGGAGAGGTGGATATAGATTCTTTGGAAAAAGAGACGAGACTTTTGAG
TCCTCGATCACGCAAGAAACACGGAACGCCTTACGAAAGTCAGTACATTA
CAGAAGCTGTCGATCAAAGTGAAGAGATATGTCAAGCTCTTGAGGACAGC
AAAAGGGATAAGAATTCGAACTACCTTTCTGATAGAAGTTCAACAACACC
GACAGGTAGCAAAAGCAGTAAATCTACCAAAGGTGTCAAAATGAGGAATC
GATCCAAATCAAGCGAAGATGAACGTAAACGAAATCAAAAGGAGCGAAAT
TCGTTATTATTTGAAGAGAAACGACCCTCACTCAAAGTGATGGGGATGGT
ATAAATGCATCAAAAAATGGGAAGACCTGAAAGCAGCAAAACTCATAGTA
AAAATGGAAGAAGCACTTATAGACGATCACTTCTTGGAAGTAGCACACTC
GCAAtttttttACAACCAACTTTTTTGGCAAGAAATttatcttcatcttc
ttctccCAAAACACCTGATGAAGAAAAGGAGAACAAAGAAGTTTCAGCAG
AGAAGATATTCAGCCTTCTAAAAGATGCTAATAAAATTATGGTCAAAGGT
gccaaactttttgaaagtttaaacgAACTGAAGCTCTGTGGTTGGATAAA
CCCTTACACATTGTTGTTAAGTGGAGTTTCTGAAGATATGAAACTTGTGA
AACGCGCTTGGATCAAGAGACATTTGAAAAACCCTGAAAACTACTTCATC
AAAGATATTGGAATTATTCGTGATTGCGTCGTCGAGATGATCCCTCAATC
GCCCTTCATGTCGTTAACCACCGCCTTGTTCGAAGCCGTCGCCGATCTCA
ACCATCAAAACATATTTCCAACCAAAGACATCCTTCACGAATATCTACGT
AAACATTACCCTGAGATTAAGACTCCCGATACGAAGATCATACATGAATG
CTTAGGGAGACTGATCAAGAATCGAAGGTTATATCATAACGGGCGTGGTT
ACTTTATCTTGTTTAATGAGAATGTTCTCAATGAAGTTATCTCATTGAAA
TCAAGTTTAAAACCTTTAACAAACGACACCACAAGCCTTGAACCTTCCAT
TATCGGGTTTAAAATGATGGACTCGCGTACTTCAAGCTCTGGACAAACTG
ACGGCCATACTGACCTTCCAACTGATTTAGATCATCGCTCACAAGGAGGA
GACGTTTATCAAAACATTCAACGACATCAAAGTGTTGATACTTTGACAGA
AGTCACAGCACTAGCTGATGGCGTGGCTAATATATCTGAATTATACACGC
CCAAATTACACAGGACCTCATTTGGAGGGAAATTGTTTCGCaaaaacaac
aataaagcagaaaaaggagcgatcgaaaaaacacataaaaacCACGCGAA
GATGTTTTCGTGTAGCACTGCAACTGATAGTATTATTCTCTCTAATGATC
TAATCAATACGCCCTCGCGTGTTCCCATTGTTCAGGGAACAGAAACAATG
ACCATTCAAAACAAAGACGTTCTTGACAGTGCAACCATGAGCGACGTCAC
AGACGTTCAGAGTCCGTCAATGTCTGGTCGTCGTCGCAAAGTCAAACGAA
GCAAAAGTTTCGGTGGCAAAAATCGTCGTGAACCACGAACTTCCTCAAAT
AAGGAGGTTTCGTTTGCGTTGATCGGCTCACCGAGAGATAGCAACGGTTC
AAACGACGACGAATATCCAAAACGTTTTCAAAGAAGCCACTCTTTCGGTG
TGGGTTACCATAGAGATAAATACCAACGACCCTCGTTTTCTGAACGGCCC
ACTATCGCACGTGCAGAAAATATTAAACTTTCAACGACTTCGAATAATAC
ATGTAGTTCCAATGAAAATACTTTCGACCACACTTTCGTGACGGAACTAG
ATGAGACGTACGACGACATAGAACCGTCTTTTGTTGACGATAATATACCG
GTGTTCGATGATGGACCCGAACTCTCTCATAGACCGGATATGTTGCCCGT
TGTTGATACATCGACTTTCGAAACGTTAGAGAATTATAAAGACCTTGGAA
GTGCGTTGAGTTTACCACGCATAAATGATAAAGGGATCAATTTTAACATG
GTAGATTTGCTATCACCGACAAAGGAGGAATGTTTAGCGGAAGAATTGAA
ACAAGCTGGAGAGGTGGATATAGATTCTTTGGAAAAAGAGACGAGACTTT
TGAGTCCTCGATCACGCAAGAAACACGGAACGCCTTACGAAAGTCAGTAC
ATTACAGAAGCTGTCGATCAAAGTGAAGAGATATGTCAAGCTCTTGAGGA
CAGCAAAAGGGATAAGAATTCGAACTACCTTTCTGATAGAAGTTCAACAA
CACCGACAGGTAGCAAAAGCAGTAAATCTACCAAAGGTGTCAAAATGAGG
AATCGATCCAAATCAAGCGAAGATGAACGTAAACGAAATCAAAAGGAGCG
AAATTCGTTATTATTTGAAGAGAAACGACCCTCACTCAAAGTGATGGGGA
TGGTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000095_pilon | genome | sc0000095_pilon:398489..404664 + |
|
