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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000095_pilon:374988..378565- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12533.5.p1 ID=MSTRG.12533.5.p1|Name=MSTRG.12533.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3578bp|location=Sequence derived from alignment at sc0000095_pilon:374988..378565- (Clytia hemisphaerica_ch_hm2_pilon)
TAAACTGAAGCAATTATTCAAATCAAACCTCATGTAAACGTCTTTCTGTA
ATCAAAAAATAATAATTTTTTAATGCAAGAAGAAGATACATCATAAACGA
TGCTCTATTCTCTTGGCTTACACTTGAACACATGTTTTGATCATTCCATT
TCTTCACTGCTATTGACAGTAAGTTCTTTCCCTCCATTTATTCTTGCTTC
AGTTCGTTCCATACGCCAAATCGATCATTTGGATTACAAAGTGGAAGTTA
CGATATCAAAGAAAAAAAGGTAGAGTGAAGTCTCAGTGATCAAGTCACTG
AAAAGATTATTTAATTTTAAACATTTTTGAAATTCTTCTAACTTGCTTCT
TTGTCTTCTTATGCAAATTAACATTTTATGTATTAATGAATGTAGAAATC
ACCTCAACAGATTATTGATCGTCCATTAACGAAATTTTTGTTGCTTTCTA
CACCAACATAACTTTTCATTAGCCTGGTTGGCAGACCTCTATATAGATAT
ACTTCCTAAATAGTTTACTTTAAGAGACTTTTCCGTCAGAGGATGAGCAA
AAACCTACTTCTATATAGACTCTTATCGTCACTTTACTTTTTTCGCAGTT
ACTACGAACATGTTCGTTACCAGACCTCCGACCAGCAGCCCTTGATGACG
TCATAGAAGAAGATGAGGAAAACTCCGAAGAACATGCCAGGTAAACTTAT
GTTATGGGAAGCCCTCTTAGTCTCTAATACTCTTCCTGTATAACTTCGAA
TAAACGCCCCCTTCTTAAACGCCCCTTGAACAAACGCCCCTCCTTAAAGG
AAGAATTTTCAATAAACGCCCCCTCAAATAAACGCCCCTGTCAAGTAGCT
GTCAGGAAGCATCATTTGAAGGGAAACTTTTTTATAGAGTTATTCGGCTG
TGCCATATGGAAAATGACGTCAAAATAGGTTCTGATTTTTTTTGTTCACA
CGTGTGTTATGAAAAGTTTTTTCTTCCAGTGATAAACAAGAGTCTGAGGT
AAAAGATGTTAAAGAAGAAGATAACGAAAATGAAGATGAAAAGGATGAGA
GCAATGAAGATGAAGAAGAAGTTTCTGATGCTGAAGCGGACGCAGACGAT
GATGACGAATTTGATGATTATGAAAGCATGTTGGAATCCATGAGAAATGT
CCTTGGTAAAACTGCAGGTATGTCTTTATTGTTTAAGATTTTCTTTCGAA
AAAGATTAAATTTTAAATGATATTCAAATAGTACGAACACATTCTCGTTG
TTAATTCTCAGTTTTCCTCTTCTTTTTAAAAGTACCATTTTTATGTTTCA
GCTAAAGAAGCTACAATCAACAACAACAGTAAGTCGAATATTCATCGTAT
TAATCACGCACTTTATCGTTTTAATTGACTCACGTTTCTCCTTCTATTTT
TCTAACTAGTACTTCCAACAGCTGTTCTTGGCAGCTGTCGTCATGCTGGC
AATCGAAAATGAGTTTACAAATAAAAAATGTGGTTTCTCGACTAACCTGA
TAATAATAATACACTCTTACGGACGTCTATGCAATTGACTTTGTCAGTAT
GGAACAGTATCTCTACCCACAAGTCCTCCTTATATTTGAGGGACTGTTAG
AATAATAGTGATGTACTTTAATGGGATAAATTTTCGCAGTGATTAAATTT
CGCGGTTCAGCTCATCTGCAAAATTTTAAGATTTCGTGGGGACTTAATTT
TGCAGATGGCATTACCGGGAGACCATATTTTTATGAGTGTGTGTCTTTTT
ACTGCCAAATTACATATACTGATTTTCGAAATTATTTGGACTTCTTTGAT
GCCAGTTTACATTTTAAAAGTAGTTATTTGACATTTTTAAAGTTTTGTTC
AAAAACAATTTCGCGGATAAGACCTTTCTAAATTTCCATTTTATTTTACT
TAATTTTACTGATGACACCCGAATTCGCGAAAATTTATCTCTTATTGGAG
TTACTCATTTATTCATCCTTCATTTCAGTGACACTGGAGAATGGGCAAGC
GAACGAACAAGAGAACAATGAAGAAGATGAAGATGAAGATGATGAATGGG
AAGAAGAAAGAGATGATGAAGGTTCCCTGTCAAGCCCCCTTGAATTAGAA
AATGAAAAGTTTCTGTACTTCAAGACTTCATTTCCCTGTCAAACCATCCT
TGCATTAAAAATTGGAAAGTTTAATTACTTCAAGGCTTATTTCCACTTCT
CAATAAACATCCAATTACCGAGATGGTGAATCAGCATTTTACTTTCTCTT
GCGCGATTCTGGTCACTCAGGGGATATTTTAAGATTGTAAGCCAACTTTT
GATTGATCTTTTCATTTGCAGATGTATCAAATAAAAATCAAAAGAATGTG
CTCCAAACAAATGGAGGTGATCGAGAAAATCTGTTTTCACGAATCGAGGA
ATCAAGAATGGCTTTAGAAAATGAGTTGGGAATGGATCTTTTTATCAAGG
TGTACCGACATGTACAGGTGTGTATTCATGATATGCACCGTTGCAATGTC
TTCTGGCATTACATCGCGGACCCAATGGCTGATTGGTTGTAACTGACGTA
AAACCAATCAATACGTCACTTTCAACCAATCAGCTGTTGGGTCCATAGAA
GACATTGCAATGGTGCATATCATGAATTCCAAGGGTTTATTTCATTTTTT
CTGTTTCATCCAGTTTGAATGAATGGTCAAAGTTTGAAAAATTTGCTTAC
CCTAATTTAGGTTCATTTTTCTTAAGAAATCAACTTCTCAGACGGGCAGG
TATTATTGCTTTATATTTTTCTCTTTCTTAACGAGAACAAAAACGAGAAT
TGGCTAAGGAGCAAAAATAGTATGAAAAATGAAAAGAAATTTGGTTGAAT
TAACCATCTTAAAAGTAGCAGGCTCAAAAATAAATGCCCAATGGCTCCGA
AATGTATTTAAGATATTTACAAGTAGCAACAAAGGGTGAGAGTTTCTTCT
TCTCTCTCTCCACTGTCGCACAGATGATGCAAGATAACGAAGATGATGAA
CTTGAGATGGGCACAACCGAAATCTCTCAACTACTCGGTGATAAAGAAAA
TCTGTACCAAAAAATACTTTATCTTGTCATCGCTGACTCAGCATATTCTG
AAGGTAAGCTGAATGACAGATGATAGATGATTGACTATGCTTACTAAACC
ACAATGTTGAGATAATACCTAAATTGTTTAGAATTTGAATAAATGTGTAT
TTTTATCAGGGCCGTAAAGATTCAAAAGCTCAAAAATTCTGTCTAGGATT
GTAAATTTTATATAATGCTTTTAAACTTATCTTAGCCTCTAAAGTTTACA
CTTGTTAAATTTATTTCTCAGGAAATGATGGCACATTTTGAAACGTAAGA
ACGTAACGTTGAGGTGAAACAGAGATATTGGCATTTTAAAACCTAGTGGT
AAGAATCGCAAATCATCAAACGTGACAGCTAAAGTTGTTACAGCAATGAT
TATTTTGTTAACAAAACAAATGGAATCAAAAATCAAAAATAATTATTTAA
CCAAAACAAAATTTTTTTTTATAAGCTACATATATGATAATTAACAAGCA
ACCAATTATAGATTTTTTTTAATTTTCC Coding sequence (CDS) from alignment at sc0000095_pilon:374988..378565- >MSTRG.12533.5.p1 ID=MSTRG.12533.5.p1|Name=MSTRG.12533.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5166bp|location=Sequence derived from alignment at sc0000095_pilon:374988..378565- (Clytia hemisphaerica_ch_hm2_pilon)
GAAATGATGGCACATTTTGAATGATGCAAGATAACGAAGATGATGAACTT
GAGATGGGCACAACCGAAATCTCTCAACTACTCGGTGATAAAGAAAATCT
GTACCAAAAAATACTTTATCTTGTCATCGCTGACTCAGCATATTCTGAAG
ATGTATCAAATAAAAATCAAAAGAATGTGCTCCAAACAAATGGAGGTGAT
CGAGAAAATCTGTTTTCACGAATCGAGGAATCAAGAATGGCTTTAGAAAA
TGAGTTGGGAATGGATCTTTTTATCAAGGTGTACCGACATGTACAGTGAC
ACTGGAGAATGGGCAAGCGAACGAACAAGAGAACAATGAAGAAGATGAAG
ATGAAGATGATGAATGGGAAGAAGAAAGAGATGATGAAGTGATAAACAAG
AGTCTGAGGTAAAAGATGTTAAAGAAGAAGATAACGAAAATGAAGATGAA
AAGGATGAGAGCAATGAAGATGAAGAAGAAGTTTCTGATGCTGAAGCGGA
CGCAGACGATGATGACGAATTTGATGATTATGAAAGCATGTTGGAATCCA
TGAGAAATGTCCTTGGTAAAACTGCAGTTACTACGAACATGTTCGTTACC
AGACCTCCGACCAGCAGCCCTTGATGACGTCATAGAAGAAGATGAGGAAA
ACTCCGAAGAACATGCCAGATGCTCTATTCTCTTGGCTTACACTTGAACA
CATGTTTTGATCATTCCATTTCTTCACTGCTATTGACAGAAATGATGGCA
CATTTTGAATGATGCAAGATAACGAAGATGATGAACTTGAGATGGGCACA
ACCGAAATCTCTCAACTACTCGGTGATAAAGAAAATCTGTACCAAAAAAT
ACTTTATCTTGTCATCGCTGACTCAGCATATTCTGAAGATGTATCAAATA
AAAATCAAAAGAATGTGCTCCAAACAAATGGAGGTGATCGAGAAAATCTG
TTTTCACGAATCGAGGAATCAAGAATGGCTTTAGAAAATGAGTTGGGAAT
GGATCTTTTTATCAAGGTGTACCGACATGTACAGTGACACTGGAGAATGG
GCAAGCGAACGAACAAGAGAACAATGAAGAAGATGAAGATGAAGATGATG
AATGGGAAGAAGAAAGAGATGATGAAGTGATAAACAAGAGTCTGAGGTAA
AAGATGTTAAAGAAGAAGATAACGAAAATGAAGATGAAAAGGATGAGAGC
AATGAAGATGAAGAAGAAGTTTCTGATGCTGAAGCGGACGCAGACGATGA
TGACGAATTTGATGATTATGAAAGCATGTTGGAATCCATGAGAAATGTCC
TTGGTAAAACTGCAGTTACTACGAACATGTTCGTTACCAGACCTCCGACC
AGCAGCCCTTGATGACGTCATAGAAGAAGATGAGGAAAACTCCGAAGAAC
ATGCCAGATGCTCTATTCTCTTGGCTTACACTTGAACACATGTTTTGATC
ATTCCATTTCTTCACTGCTATTGACAGAAATGATGGCACATTTTGAATGA
TGCAAGATAACGAAGATGATGAACTTGAGATGGGCACAACCGAAATCTCT
CAACTACTCGGTGATAAAGAAAATCTGTACCAAAAAATACTTTATCTTGT
CATCGCTGACTCAGCATATTCTGAAGATGTATCAAATAAAAATCAAAAGA
ATGTGCTCCAAACAAATGGAGGTGATCGAGAAAATCTGTTTTCACGAATC
GAGGAATCAAGAATGGCTTTAGAAAATGAGTTGGGAATGGATCTTTTTAT
CAAGGTGTACCGACATGTACAGTGACACTGGAGAATGGGCAAGCGAACGA
ACAAGAGAACAATGAAGAAGATGAAGATGAAGATGATGAATGGGAAGAAG
AAAGAGATGATGAAGTGATAAACAAGAGTCTGAGGTAAAAGATGTTAAAG
AAGAAGATAACGAAAATGAAGATGAAAAGGATGAGAGCAATGAAGATGAA
GAAGAAGTTTCTGATGCTGAAGCGGACGCAGACGATGATGACGAATTTGA
TGATTATGAAAGCATGTTGGAATCCATGAGAAATGTCCTTGGTAAAACTG
CAGTTACTACGAACATGTTCGTTACCAGACCTCCGACCAGCAGCCCTTGA
TGACGTCATAGAAGAAGATGAGGAAAACTCCGAAGAACATGCCAGATGCT
CTATTCTCTTGGCTTACACTTGAACACATGTTTTGATCATTCCATTTCTT
CACTGCTATTGACAGAAATGATGGCACATTTTGAATGATGCAAGATAACG
AAGATGATGAACTTGAGATGGGCACAACCGAAATCTCTCAACTACTCGGT
GATAAAGAAAATCTGTACCAAAAAATACTTTATCTTGTCATCGCTGACTC
AGCATATTCTGAAGATGTATCAAATAAAAATCAAAAGAATGTGCTCCAAA
CAAATGGAGGTGATCGAGAAAATCTGTTTTCACGAATCGAGGAATCAAGA
ATGGCTTTAGAAAATGAGTTGGGAATGGATCTTTTTATCAAGGTGTACCG
ACATGTACAGTGACACTGGAGAATGGGCAAGCGAACGAACAAGAGAACAA
TGAAGAAGATGAAGATGAAGATGATGAATGGGAAGAAGAAAGAGATGATG
AAGTGATAAACAAGAGTCTGAGGTAAAAGATGTTAAAGAAGAAGATAACG
AAAATGAAGATGAAAAGGATGAGAGCAATGAAGATGAAGAAGAAGTTTCT
GATGCTGAAGCGGACGCAGACGATGATGACGAATTTGATGATTATGAAAG
CATGTTGGAATCCATGAGAAATGTCCTTGGTAAAACTGCAGTTACTACGA
ACATGTTCGTTACCAGACCTCCGACCAGCAGCCCTTGATGACGTCATAGA
AGAAGATGAGGAAAACTCCGAAGAACATGCCAGATGCTCTATTCTCTTGG
CTTACACTTGAACACATGTTTTGATCATTCCATTTCTTCACTGCTATTGA
CAGAAATGATGGCACATTTTGAATGATGCAAGATAACGAAGATGATGAAC
TTGAGATGGGCACAACCGAAATCTCTCAACTACTCGGTGATAAAGAAAAT
CTGTACCAAAAAATACTTTATCTTGTCATCGCTGACTCAGCATATTCTGA
AGATGTATCAAATAAAAATCAAAAGAATGTGCTCCAAACAAATGGAGGTG
ATCGAGAAAATCTGTTTTCACGAATCGAGGAATCAAGAATGGCTTTAGAA
AATGAGTTGGGAATGGATCTTTTTATCAAGGTGTACCGACATGTACAGTG
ACACTGGAGAATGGGCAAGCGAACGAACAAGAGAACAATGAAGAAGATGA
AGATGAAGATGATGAATGGGAAGAAGAAAGAGATGATGAAGTGATAAACA
AGAGTCTGAGGTAAAAGATGTTAAAGAAGAAGATAACGAAAATGAAGATG
AAAAGGATGAGAGCAATGAAGATGAAGAAGAAGTTTCTGATGCTGAAGCG
GACGCAGACGATGATGACGAATTTGATGATTATGAAAGCATGTTGGAATC
CATGAGAAATGTCCTTGGTAAAACTGCAGTTACTACGAACATGTTCGTTA
CCAGACCTCCGACCAGCAGCCCTTGATGACGTCATAGAAGAAGATGAGGA
AAACTCCGAAGAACATGCCAGATGCTCTATTCTCTTGGCTTACACTTGAA
CACATGTTTTGATCATTCCATTTCTTCACTGCTATTGACAGAAATGATGG
CACATTTTGAATGATGCAAGATAACGAAGATGATGAACTTGAGATGGGCA
CAACCGAAATCTCTCAACTACTCGGTGATAAAGAAAATCTGTACCAAAAA
ATACTTTATCTTGTCATCGCTGACTCAGCATATTCTGAAGATGTATCAAA
TAAAAATCAAAAGAATGTGCTCCAAACAAATGGAGGTGATCGAGAAAATC
TGTTTTCACGAATCGAGGAATCAAGAATGGCTTTAGAAAATGAGTTGGGA
ATGGATCTTTTTATCAAGGTGTACCGACATGTACAGTGACACTGGAGAAT
GGGCAAGCGAACGAACAAGAGAACAATGAAGAAGATGAAGATGAAGATGA
TGAATGGGAAGAAGAAAGAGATGATGAAGTGATAAACAAGAGTCTGAGGT
AAAAGATGTTAAAGAAGAAGATAACGAAAATGAAGATGAAAAGGATGAGA
GCAATGAAGATGAAGAAGAAGTTTCTGATGCTGAAGCGGACGCAGACGAT
GATGACGAATTTGATGATTATGAAAGCATGTTGGAATCCATGAGAAATGT
CCTTGGTAAAACTGCAGTTACTACGAACATGTTCGTTACCAGACCTCCGA
CCAGCAGCCCTTGATGACGTCATAGAAGAAGATGAGGAAAACTCCGAAGA
ACATGCCAGATGCTCTATTCTCTTGGCTTACACTTGAACACATGTTTTGA
TCATTCCATTTCTTCACTGCTATTGACAGAAATGATGGCACATTTTGAAT
GATGCAAGATAACGAAGATGATGAACTTGAGATGGGCACAACCGAAATCT
CTCAACTACTCGGTGATAAAGAAAATCTGTACCAAAAAATACTTTATCTT
GTCATCGCTGACTCAGCATATTCTGAAGATGTATCAAATAAAAATCAAAA
GAATGTGCTCCAAACAAATGGAGGTGATCGAGAAAATCTGTTTTCACGAA
TCGAGGAATCAAGAATGGCTTTAGAAAATGAGTTGGGAATGGATCTTTTT
ATCAAGGTGTACCGACATGTACAGTGACACTGGAGAATGGGCAAGCGAAC
GAACAAGAGAACAATGAAGAAGATGAAGATGAAGATGATGAATGGGAAGA
AGAAAGAGATGATGAAGTGATAAACAAGAGTCTGAGGTAAAAGATGTTAA
AGAAGAAGATAACGAAAATGAAGATGAAAAGGATGAGAGCAATGAAGATG
AAGAAGAAGTTTCTGATGCTGAAGCGGACGCAGACGATGATGACGAATTT
GATGATTATGAAAGCATGTTGGAATCCATGAGAAATGTCCTTGGTAAAAC
TGCAGTTACTACGAACATGTTCGTTACCAGACCTCCGACCAGCAGCCCTT
GATGACGTCATAGAAGAAGATGAGGAAAACTCCGAAGAACATGCCAGATG
CTCTATTCTCTTGGCTTACACTTGAACACATGTTTTGATCATTCCATTTC
TTCACTGCTATTGACA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000095_pilon | genome | sc0000095_pilon:374988..378565 - |
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