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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000095_pilon:288037..290671- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12528.6.p1 ID=MSTRG.12528.6.p1|Name=MSTRG.12528.6.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2635bp|location=Sequence derived from alignment at sc0000095_pilon:288037..290671- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAATTATAGTGCTCTCAATTATCATTTCAATGGTATTATATGCCAGAA
TTGAAGTATTGTATTTAATATGGCAGGCAAAACAAGAATTAGAGTTTAGC
TAAATGATACTTAAATCTATTTCAGAGAATCTAATTATGTCAGACGTAGA
AAGAAAATTACGATTAGCCAAACAAAAATTACTGAGTAAGGACGAAAAGG
TGTCATTAAACATAGGCTCGGAAGAATGGTTAAATGTAAGTACATAATAT
ATTATTTGATTAATATTGGGTCCTGGGGATACTGTTTTGTTTTCAATGAT
AGGTTAATCTTAATCCAACCATTAATAAGTACTATGATTTTATTTGTGCT
TTTCTATGTTTAATGTGATCAATATCTTCAGTTAATCTCTTTTTAATTAG
AAATAATTTTTTATTGAAATCGTTGGCTGTTATATGCTCTTACTGAAGGA
GAAAATTTTATAAATTTTCATTTATTTTGTTAGCTATATTATCCATTAAT
CTCATTGCAGAGTTTTGGTCTCAGGAAGCAACGTTTAGAATATAAGCAGA
TTCTCTCAAAAGTAGGATTTCGCAACTGTGATGGTAGGTTGTTTTTTAAT
TGTTAAACATACCACAAGTCTGTTAAGATATTTTGGCTCTACTTTATGTC
TCATCCGCTTCACAAACTTAGGAATCAACAAATCATTTACAAATATCTTG
ATCATTAAACTATTCTATGTTCAAATGTGTTTACAAACATACATTTACAA
ACTCATTGTCAGATCTTTTTGATTTCAGATTACATCAAAATACTACAAAA
ACCTGTCACATCTAAATACGGCGAGGGCTTGTTCAAGAAAGTTGGCCATA
CAGATGGAGTATTTTTCAACGTAAGTAACTTTTGCAACTTTCTTTACAGG
TACAAAGGAAATGTTCTTTGTCAAATCGCTCTTGATTCAGATATTTTACT
ACTTCAGGTTACAGCGTCAAAAGAAAAACTGATACAATATGAACAAAAAC
TCACAGAAGCAATGGATTTATATAAACAAAGGCTTGAGTGGCTTAACACG
GGCAGGTATTATGCTTCATTGACAATATCTTTTAAGAAATTTAAAGGGAA
ATCTCTTCCAAAACTTTTCAATATCTGTTGAAACCTTTCATTTCATTTCA
ACCACTCTTGCAAATTCTATTAGTTACATTAAGTGGTAGCTGTTTTTCTT
ACATTATTTGGGTACTAACTAATCATCAGTAGAAAAATTAATTCCATTTT
AGTCGAAAAGCATTTGGTATGATTGGTAAAAAGGAAGTGTGTCTTCTTTG
TGATATTCAACAGAAAAATGAAGAAGACTTCTTGTCATACAAAGAAATGA
TATCTTCTGTGATCAGAGAGCAGTTCGAATCTTTTAAGTCGGCAATTTTT
ATCAGGTAGTGCAATCATTGTATTTTTAAAAAACCTTCAATTACTCATAT
TTCAAAATATTTTTTTCATTGAAAATTTCTGTTGAAGGATGAAGGGTGAT
GGCAACTTTTATTCAGAAATTGATAATGTCTTTATGACATAGCTTAATTG
TAATTTTTCAATTCTTCAATAGAGCATCCTTAGAAAATAGTAAATGGCAA
TCAGACACGAGATCATCAGAACGAATGCTCAGTGATGCTTTAGATTGGTG
GGAAGATCAACCAAACCTTACAGAACATTCAAAAACTTGTGTTTTAGAAG
CAATTTCGGAAGCCAATGAAAGCAATAACAAGGTTTGAATTTATATTATT
CTTTAATTGAATCTTTTCTCCTGGTGTTTTATTGGTTTTGTAATCTTTTT
GTTTTGTTATTTAGCTTGATGTTATTTACTTGGTGACAGATGGAACTGTG
GCTTATGGGGCAACTGAAATCTTATTGGAAAAGGTATCATTTAAAGCAGA
AATTTTTTTCCGATTAATGTTCGAATAGAATCACTTCATGAGGAGGAATG
TCTTGTAATATTACCTCTTTTTATATACAGATCAAACCTTTGAAAATCCC
GATAAACGTTGTCTTCTTACAATCTACCTTGACACCAAACAATGCGAATG
AAGTTTTTACACAAATCTCCAAACAGTCAAAAGGAAGGTAATGTGAAATT
TCTTTTTTCTGTAAATTAGATTCTGTTATAGTTTTGTTGTTAAATCACTG
TTAAATAATAGCACACTTAATTCATTGACCAGATGTCAACCACAGATATA
ATAAAGCCCAATGGACTAGATGTCGTGCTTTAAGCCATTGCAGGCAAAAA
AATTGACTATCAAAAAAAATATTGTTGCTATTGTTTTAAAAAACTTGCGA
AGCTTCTGATTGGTCAAGCGCTGAAATTCTATTGAAATGTCACGTGACAT
AGGTAGGTTTTCCTACCTAATCACGGCATACTTTTCAGCCAAAGCACAAC
GTCTAGCCCTTTGGTCTTTATAAATCTATGATGTCAACCTGTTATAAATT
CCTTATTTTATTTTTCAGTTTTCATACTTTCAAAATGAATACTGATTGTG
ATAATTCAATGAATCAAGATAAGAATATCCGATCTGAAGTTGTTCTTGTA
TGGGAAGAGTTGGACAAAGCAAGGAATACTTTATATGATGTCAAAAAACT
TGTCAATGAAATACAAAAGGAAAACAGAATAAAAG Coding sequence (CDS) from alignment at sc0000095_pilon:288037..290671- >MSTRG.12528.6.p1 ID=MSTRG.12528.6.p1|Name=MSTRG.12528.6.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=7176bp|location=Sequence derived from alignment at sc0000095_pilon:288037..290671- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTCATACTTTCAAAATGAATACTGATTGTGATAATTCAATGAATCAAG
ATAAGAATATCCGATCTGAAGTTGTTCTTGTATGGGAAGAGTTGGACAAA
GCAAGGAATACTTTATATGATGTCAAAAAACTTGTCAATGAAATACAAAA
GGAAAACAGAATAAAAATCAAACCTTTGAAAATCCCGATAAACGTTGTCT
TCTTACAATCTACCTTGACACCAAACAATGCGAATGAAGTTTTTACACAA
ATCTCCAAACAGTCAAAAGGAAGCTTGATGTTATTTACTTGGTGACAGAT
GGAACTGTGGCTTATGGGGCAACTGAAATCTTATTGGAAAAGAGCATCCT
TAGAAAATAGTAAATGGCAATCAGACACGAGATCATCAGAACGAATGCTC
AGTGATGCTTTAGATTGGTGGGAAGATCAACCAAACCTTACAGAACATTC
AAAAACTTGTGTTTTAGAAGCAATTTCGGAAGCCAATGAAAGCAATAACA
AGGTTACAGCGTCAAAAGAAAAACTGATACAATATGAACAAAAACTCACA
GAAGCAATGGATTTATATAAACAAAGGCTTGAGTGGCTTAACACGGGCAG
ATTACATCAAAATACTACAAAAACCTGTCACATCTAAATACGGCGAGGGC
TTGTTCAAGAAAGTTGGCCATACAGATGGAGTATTTTTCAACAGTTTTGG
TCTCAGGAAGCAACGTTTAGAATATAAGCAGATTCTCTCAAAAGTAGGAT
TTCGCAACTGTGATGATGATACTTAAATCTATTTCAGAGAATCTAATTAT
GTCAGACGTAGAAAGAAAATTACGATTAGCCAAACAAAAATTACTGAGTA
AGGACGAAAAGGTGTCATTAAACATAGGCTCGGAAGAATGGTTAAATTTT
TCATACTTTCAAAATGAATACTGATTGTGATAATTCAATGAATCAAGATA
AGAATATCCGATCTGAAGTTGTTCTTGTATGGGAAGAGTTGGACAAAGCA
AGGAATACTTTATATGATGTCAAAAAACTTGTCAATGAAATACAAAAGGA
AAACAGAATAAAAATCAAACCTTTGAAAATCCCGATAAACGTTGTCTTCT
TACAATCTACCTTGACACCAAACAATGCGAATGAAGTTTTTACACAAATC
TCCAAACAGTCAAAAGGAAGCTTGATGTTATTTACTTGGTGACAGATGGA
ACTGTGGCTTATGGGGCAACTGAAATCTTATTGGAAAAGAGCATCCTTAG
AAAATAGTAAATGGCAATCAGACACGAGATCATCAGAACGAATGCTCAGT
GATGCTTTAGATTGGTGGGAAGATCAACCAAACCTTACAGAACATTCAAA
AACTTGTGTTTTAGAAGCAATTTCGGAAGCCAATGAAAGCAATAACAAGG
TTACAGCGTCAAAAGAAAAACTGATACAATATGAACAAAAACTCACAGAA
GCAATGGATTTATATAAACAAAGGCTTGAGTGGCTTAACACGGGCAGATT
ACATCAAAATACTACAAAAACCTGTCACATCTAAATACGGCGAGGGCTTG
TTCAAGAAAGTTGGCCATACAGATGGAGTATTTTTCAACAGTTTTGGTCT
CAGGAAGCAACGTTTAGAATATAAGCAGATTCTCTCAAAAGTAGGATTTC
GCAACTGTGATGATGATACTTAAATCTATTTCAGAGAATCTAATTATGTC
AGACGTAGAAAGAAAATTACGATTAGCCAAACAAAAATTACTGAGTAAGG
ACGAAAAGGTGTCATTAAACATAGGCTCGGAAGAATGGTTAAATTTTTCA
TACTTTCAAAATGAATACTGATTGTGATAATTCAATGAATCAAGATAAGA
ATATCCGATCTGAAGTTGTTCTTGTATGGGAAGAGTTGGACAAAGCAAGG
AATACTTTATATGATGTCAAAAAACTTGTCAATGAAATACAAAAGGAAAA
CAGAATAAAAATCAAACCTTTGAAAATCCCGATAAACGTTGTCTTCTTAC
AATCTACCTTGACACCAAACAATGCGAATGAAGTTTTTACACAAATCTCC
AAACAGTCAAAAGGAAGCTTGATGTTATTTACTTGGTGACAGATGGAACT
GTGGCTTATGGGGCAACTGAAATCTTATTGGAAAAGAGCATCCTTAGAAA
ATAGTAAATGGCAATCAGACACGAGATCATCAGAACGAATGCTCAGTGAT
GCTTTAGATTGGTGGGAAGATCAACCAAACCTTACAGAACATTCAAAAAC
TTGTGTTTTAGAAGCAATTTCGGAAGCCAATGAAAGCAATAACAAGGTTA
CAGCGTCAAAAGAAAAACTGATACAATATGAACAAAAACTCACAGAAGCA
ATGGATTTATATAAACAAAGGCTTGAGTGGCTTAACACGGGCAGATTACA
TCAAAATACTACAAAAACCTGTCACATCTAAATACGGCGAGGGCTTGTTC
AAGAAAGTTGGCCATACAGATGGAGTATTTTTCAACAGTTTTGGTCTCAG
GAAGCAACGTTTAGAATATAAGCAGATTCTCTCAAAAGTAGGATTTCGCA
ACTGTGATGATGATACTTAAATCTATTTCAGAGAATCTAATTATGTCAGA
CGTAGAAAGAAAATTACGATTAGCCAAACAAAAATTACTGAGTAAGGACG
AAAAGGTGTCATTAAACATAGGCTCGGAAGAATGGTTAAATTTTTCATAC
TTTCAAAATGAATACTGATTGTGATAATTCAATGAATCAAGATAAGAATA
TCCGATCTGAAGTTGTTCTTGTATGGGAAGAGTTGGACAAAGCAAGGAAT
ACTTTATATGATGTCAAAAAACTTGTCAATGAAATACAAAAGGAAAACAG
AATAAAAATCAAACCTTTGAAAATCCCGATAAACGTTGTCTTCTTACAAT
CTACCTTGACACCAAACAATGCGAATGAAGTTTTTACACAAATCTCCAAA
CAGTCAAAAGGAAGCTTGATGTTATTTACTTGGTGACAGATGGAACTGTG
GCTTATGGGGCAACTGAAATCTTATTGGAAAAGAGCATCCTTAGAAAATA
GTAAATGGCAATCAGACACGAGATCATCAGAACGAATGCTCAGTGATGCT
TTAGATTGGTGGGAAGATCAACCAAACCTTACAGAACATTCAAAAACTTG
TGTTTTAGAAGCAATTTCGGAAGCCAATGAAAGCAATAACAAGGTTACAG
CGTCAAAAGAAAAACTGATACAATATGAACAAAAACTCACAGAAGCAATG
GATTTATATAAACAAAGGCTTGAGTGGCTTAACACGGGCAGATTACATCA
AAATACTACAAAAACCTGTCACATCTAAATACGGCGAGGGCTTGTTCAAG
AAAGTTGGCCATACAGATGGAGTATTTTTCAACAGTTTTGGTCTCAGGAA
GCAACGTTTAGAATATAAGCAGATTCTCTCAAAAGTAGGATTTCGCAACT
GTGATGATGATACTTAAATCTATTTCAGAGAATCTAATTATGTCAGACGT
AGAAAGAAAATTACGATTAGCCAAACAAAAATTACTGAGTAAGGACGAAA
AGGTGTCATTAAACATAGGCTCGGAAGAATGGTTAAATTTTTCATACTTT
CAAAATGAATACTGATTGTGATAATTCAATGAATCAAGATAAGAATATCC
GATCTGAAGTTGTTCTTGTATGGGAAGAGTTGGACAAAGCAAGGAATACT
TTATATGATGTCAAAAAACTTGTCAATGAAATACAAAAGGAAAACAGAAT
AAAAATCAAACCTTTGAAAATCCCGATAAACGTTGTCTTCTTACAATCTA
CCTTGACACCAAACAATGCGAATGAAGTTTTTACACAAATCTCCAAACAG
TCAAAAGGAAGCTTGATGTTATTTACTTGGTGACAGATGGAACTGTGGCT
TATGGGGCAACTGAAATCTTATTGGAAAAGAGCATCCTTAGAAAATAGTA
AATGGCAATCAGACACGAGATCATCAGAACGAATGCTCAGTGATGCTTTA
GATTGGTGGGAAGATCAACCAAACCTTACAGAACATTCAAAAACTTGTGT
TTTAGAAGCAATTTCGGAAGCCAATGAAAGCAATAACAAGGTTACAGCGT
CAAAAGAAAAACTGATACAATATGAACAAAAACTCACAGAAGCAATGGAT
TTATATAAACAAAGGCTTGAGTGGCTTAACACGGGCAGATTACATCAAAA
TACTACAAAAACCTGTCACATCTAAATACGGCGAGGGCTTGTTCAAGAAA
GTTGGCCATACAGATGGAGTATTTTTCAACAGTTTTGGTCTCAGGAAGCA
ACGTTTAGAATATAAGCAGATTCTCTCAAAAGTAGGATTTCGCAACTGTG
ATGATGATACTTAAATCTATTTCAGAGAATCTAATTATGTCAGACGTAGA
AAGAAAATTACGATTAGCCAAACAAAAATTACTGAGTAAGGACGAAAAGG
TGTCATTAAACATAGGCTCGGAAGAATGGTTAAATTTTTCATACTTTCAA
AATGAATACTGATTGTGATAATTCAATGAATCAAGATAAGAATATCCGAT
CTGAAGTTGTTCTTGTATGGGAAGAGTTGGACAAAGCAAGGAATACTTTA
TATGATGTCAAAAAACTTGTCAATGAAATACAAAAGGAAAACAGAATAAA
AATCAAACCTTTGAAAATCCCGATAAACGTTGTCTTCTTACAATCTACCT
TGACACCAAACAATGCGAATGAAGTTTTTACACAAATCTCCAAACAGTCA
AAAGGAAGCTTGATGTTATTTACTTGGTGACAGATGGAACTGTGGCTTAT
GGGGCAACTGAAATCTTATTGGAAAAGAGCATCCTTAGAAAATAGTAAAT
GGCAATCAGACACGAGATCATCAGAACGAATGCTCAGTGATGCTTTAGAT
TGGTGGGAAGATCAACCAAACCTTACAGAACATTCAAAAACTTGTGTTTT
AGAAGCAATTTCGGAAGCCAATGAAAGCAATAACAAGGTTACAGCGTCAA
AAGAAAAACTGATACAATATGAACAAAAACTCACAGAAGCAATGGATTTA
TATAAACAAAGGCTTGAGTGGCTTAACACGGGCAGATTACATCAAAATAC
TACAAAAACCTGTCACATCTAAATACGGCGAGGGCTTGTTCAAGAAAGTT
GGCCATACAGATGGAGTATTTTTCAACAGTTTTGGTCTCAGGAAGCAACG
TTTAGAATATAAGCAGATTCTCTCAAAAGTAGGATTTCGCAACTGTGATG
ATGATACTTAAATCTATTTCAGAGAATCTAATTATGTCAGACGTAGAAAG
AAAATTACGATTAGCCAAACAAAAATTACTGAGTAAGGACGAAAAGGTGT
CATTAAACATAGGCTCGGAAGAATGGTTAAATTTTTCATACTTTCAAAAT
GAATACTGATTGTGATAATTCAATGAATCAAGATAAGAATATCCGATCTG
AAGTTGTTCTTGTATGGGAAGAGTTGGACAAAGCAAGGAATACTTTATAT
GATGTCAAAAAACTTGTCAATGAAATACAAAAGGAAAACAGAATAAAAAT
CAAACCTTTGAAAATCCCGATAAACGTTGTCTTCTTACAATCTACCTTGA
CACCAAACAATGCGAATGAAGTTTTTACACAAATCTCCAAACAGTCAAAA
GGAAGCTTGATGTTATTTACTTGGTGACAGATGGAACTGTGGCTTATGGG
GCAACTGAAATCTTATTGGAAAAGAGCATCCTTAGAAAATAGTAAATGGC
AATCAGACACGAGATCATCAGAACGAATGCTCAGTGATGCTTTAGATTGG
TGGGAAGATCAACCAAACCTTACAGAACATTCAAAAACTTGTGTTTTAGA
AGCAATTTCGGAAGCCAATGAAAGCAATAACAAGGTTACAGCGTCAAAAG
AAAAACTGATACAATATGAACAAAAACTCACAGAAGCAATGGATTTATAT
AAACAAAGGCTTGAGTGGCTTAACACGGGCAGATTACATCAAAATACTAC
AAAAACCTGTCACATCTAAATACGGCGAGGGCTTGTTCAAGAAAGTTGGC
CATACAGATGGAGTATTTTTCAACAGTTTTGGTCTCAGGAAGCAACGTTT
AGAATATAAGCAGATTCTCTCAAAAGTAGGATTTCGCAACTGTGATGATG
ATACTTAAATCTATTTCAGAGAATCTAATTATGTCAGACGTAGAAAGAAA
ATTACGATTAGCCAAACAAAAATTACTGAGTAAGGACGAAAAGGTGTCAT
TAAACATAGGCTCGGAAGAATGGTTAAATTTTTCATACTTTCAAAATGAA
TACTGATTGTGATAATTCAATGAATCAAGATAAGAATATCCGATCTGAAG
TTGTTCTTGTATGGGAAGAGTTGGACAAAGCAAGGAATACTTTATATGAT
GTCAAAAAACTTGTCAATGAAATACAAAAGGAAAACAGAATAAAAATCAA
ACCTTTGAAAATCCCGATAAACGTTGTCTTCTTACAATCTACCTTGACAC
CAAACAATGCGAATGAAGTTTTTACACAAATCTCCAAACAGTCAAAAGGA
AGCTTGATGTTATTTACTTGGTGACAGATGGAACTGTGGCTTATGGGGCA
ACTGAAATCTTATTGGAAAAGAGCATCCTTAGAAAATAGTAAATGGCAAT
CAGACACGAGATCATCAGAACGAATGCTCAGTGATGCTTTAGATTGGTGG
GAAGATCAACCAAACCTTACAGAACATTCAAAAACTTGTGTTTTAGAAGC
AATTTCGGAAGCCAATGAAAGCAATAACAAGGTTACAGCGTCAAAAGAAA
AACTGATACAATATGAACAAAAACTCACAGAAGCAATGGATTTATATAAA
CAAAGGCTTGAGTGGCTTAACACGGGCAGATTACATCAAAATACTACAAA
AACCTGTCACATCTAAATACGGCGAGGGCTTGTTCAAGAAAGTTGGCCAT
ACAGATGGAGTATTTTTCAACAGTTTTGGTCTCAGGAAGCAACGTTTAGA
ATATAAGCAGATTCTCTCAAAAGTAGGATTTCGCAACTGTGATGATGATA
CTTAAATCTATTTCAGAGAATCTAATTATGTCAGACGTAGAAAGAAAATT
ACGATTAGCCAAACAAAAATTACTGAGTAAGGACGAAAAGGTGTCATTAA
ACATAGGCTCGGAAGAATGGTTAAAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000095_pilon | genome | sc0000095_pilon:288037..290671 - |
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