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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000095_pilon:122320..127021- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12516.2.p2 ID=MSTRG.12516.2.p2|Name=MSTRG.12516.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4702bp|location=Sequence derived from alignment at sc0000095_pilon:122320..127021- (Clytia hemisphaerica_ch_hm2_pilon)
TGTTATGTTTATATCCACAGCCACGGCTACCATCTTTGTTTAGCATTTGA
GATTTCGTGCGTATTTACACGAATCGTATTTACTTCTAGCAAGACAACCA
TGAAGCCAAGATGGCGTCTAGCTGACTCAATTTATTTCTAAACCTACCTG
ATTTAAATCCACTTACTCTGTTACAATCCGTCCACAAAGAGACACAACAA
CTGGCGACGAAGATAGTCAACAGATCATAGAACACTATTTCAACAATATT
TGAGTGAATCAAGACTCAAATGGCAGCACAACTCCAGATTCCTATGGTCC
AAAACTTCGACCCACGAGGAGATCCACAAACACTCAGCCAAAGATGGGAA
AGATGGCAGAAATCGTTTACATACTTTATCACCGCATCTGGTATAGGAAA
CGATGCCAGAAAGAAGGCCCTCTTACTACATACAATGGGCACTGAAACAC
AAGAACTTTTTGAAACTCTACCAGATACTGGACAAACATACGATGAAGCA
GTCGAAGCACTTACGACATACTTCATACCACAGAAAAACGTTACATTCGA
GAGATCAGTTTTCAACAATGCAAACCAACAAACCCATGAGACAACTGAAC
AATACGTATCAAGACTACGCAAACTTGCTCAAAATTGCGATTATGGAAAT
TCTTTAAACGACCACATCCGAGACAGAGTAGTATCTGGCTGTAAGGGCAG
CAAGTACAGAGAGAAATTGCTTGCCGAGAAAAACTTAACCCTTGAAAGAG
TTATTGAAATCGGTCAATCCATGGAAGCAGCCAAATCCCAGTCGAAAAGG
ATAGAACAATCTAACAACAAAGATCCACCTGACCACGTCAACACTTTAGA
CCGGCAGAACAACCGAAATTTCCGTGGAAGAGGAAGATCCAACATCCGTT
TCCCAAGAGGAGGAAGTGGACCTAGAAATCGATCACAGGCACCACACCCA
TCAACCAGAGGAACCAACAGCCATCGTATCATGTGCGGAAGGTGTGGAGC
AATGGGCCACAAAGGTGAGGAATGTCGTAGATCCAAAAATTCGAAATGCA
ACAAATGTGGCAAAACTGGACACTTTCAACGCATGTGTCTGTCCAACCGT
CAACAACCGATCAATAGACGAGGCGTAAATCAACTAGAGGAACAGCCACC
AGAAGATGACCCACCAACACCTGTCCAAGCAACCGACGAGGATCTCGAAA
ACAGGTTTGAAGACATAATTATTTTCAAAATCGGCGGACATGAACTACCA
CTGTACTCCATAGACATTCTGAACACCAAAGTATCTGTACTTATCGACTC
AGGCTCATCAGTCAATATCATAGATGAAATTACATATAATTCGCTCGATT
CAAAACCGCAACTCACCAATTCATCTTCACGTATCTTCCCGTACCAGTCA
ACACACCCAATTCCAACGCTAGGAACCTTCTCAACCGTTATCAGAGCAGA
CGGACAAGATCAGCATGCAGAGTTCATCGTAGTTCAAGGTAACTCTGGCT
CAATCCTTGGCAGATCAACCGCCATTAGTTTAGACATTCTTCGAATTGGC
AAACCATCAGAACCAGAGCTCGTAAGATCATTATCAAGCAAAGAGTACAA
AGAAAACATTATGAAAAACCATTCAAAACTGTTCGAAGGAGTTGGTAAAC
TTCAAAACTTTAAACTACAACTTCACATTGATCCAAACGTCACACCAGTG
CAGCAGCCAATCAGACGCATACCGTTTCACTCAAGAGAGAAAATTGAAAA
TGAACTTGAGAGACTTATTAAATTAGACATCATTGAACCTGTTGATGGTC
CTACCACATGGCTTAACCCAGTCGTTGCTGGTAGTCGAAAAAACGGTAAA
ATCAGACTTTGTGTGGACATGAGAAAAGCCAATGAAGCAATTATCAGGGA
ACGTCACGTCATACCAAAACTAGAAGACATCACCGCAGAACTTCATGACG
CAACTCACTTCTCCAAGATCGACCTCCGAGACGGTTACCACCAAATCGAA
TTAGACGAATCATCAAGGAACATCACTACGTTCGCTACCCACAAAGGACT
ATTCCGGTACAAGAGACTCTTTTATGGTGTTAATTCTGGATTTGAAGCTT
TCCAGAAACAGATTGAAATTGTATTATCTGGATTGGAGGGAGTAAAGAAC
ATCTCCGACGACATAGTAATTTGGGGTAGAACACAAGAGGAACATGACGA
ACGGTTATATGCTTTACTAGACTGCCTTCTCAAGAACGGACTCCGAGTAA
ACCCAGAGAAGTGCATTTTCGATGTGCCATCGATCGACTTCGATGGACAT
ATCATCTCAGCAGATGGTATAAGACTTGATCCAACCAAGAAAGATGCTAT
TGATGCTATTAAACAACCAAAAAACGTTTCAGAAGTAAGATCGCTTATGG
GACTTATGAACTATTGTTTAAAATTTATTCCCAGTTACGCTACACTCACA
GAACCAATCAGACGTCTCACCAAGAAAAATGCAAAGTTTGAATGGGGTCC
AGAACAGTCAGAAGCATTTAAACTCTTAAAACAAAAACTTTTAGAGTCGC
CAACCTTAGCATTCTACAACCCGCTAGCTGAAACCAAAGTCGTCACTGAT
GCCAGTCCATTCGGACTAGGAGCCGTCCTTCTTCAAAAGCAACCGAACGG
AGATTTCTTACCAGTATCCTACGGTTCCAGATCACTGTCAGATGTTGAAT
CCAGATACAGCCAAACGGAAAGAGAAGCCCTTGCCGTAATGTGGGCTTGT
GAACATTACCACTATTATCTATATGATAGACTCTTTACCGTAGAAACCGA
TCACAAACCGCTACTGTCACTACTAACATCCAAGGCAAAACGTCCAACAC
CACGTATTCAGAGATGGCTACTCAGACTCCAAGCATACCACTACACAATG
TCGTACATCCCAGGTAAACTGAATGCAGCAGACATCCTCTCGCGTAGCCC
CATCAAGACAGCAGACCAAGAAAATCCTGCAGACCATCACATTGCTACAA
TCACCCGCCAAGCTGTCCCAGAATCGCTCTCCATCACAGAAATTGCAAAG
GAGACAGCCACAGATCAAACCTTGTCCACTGTAGTCAACAGCGTTATCAG
AGACAACTGGAGCAACAACCCAGACATCACGCCATTCCGTAAGATCAGAG
ATCAACTATCTGTATTTAATGGCATCCTTCTCAAGAACAACCAAATTGTC
ATACCTCAGTCGTTACAAAGGAAAATTCTCGACATCGCCCACCAAGGACA
CCAAGGTATTGTACGAACAAAGCTTTACCTCAGAGATCACGTATGGTGGC
CAAAGATCAACCAGCATGTAGAAGACCTAGTCAAACAATGTCATGCCTGT
CAAATCGTCATACCGAAACACAGCAAAGCCGAACCGTTAAAACCAACACC
ATTACCAGAAGAACCTTGGCAGCAACTCGGTATTGATCTCAAAGGACCGC
TTCCAGATCAGAACACATTACTCGTGATCCTTGACTACCACTCCAGGTAC
CCGATTGTTCATGTTCTCAACAAAGACACCACATCAGACCGAATCATTGA
AAAGCTGATGTCAACCTTTGCTATCTTTGGGTATCCTGAATCAATCGTCA
CAGACAACGGACCACAATTCATTGCATCCAACTTTGAAGAATTCCTCAAG
TCGAGAAACATCAACCACCGTAAAGTCTTGCCGTATCATGCAGCAGGAAA
TGGTGAAGTGGAAAGATTCAACCGTACCCTTGGCAAGTTCCTTCAAACAT
GCAGCGCCAATCGTACAGACTGGAAGAAGCAACTCGACTCATTCTTGTTA
TCCTACCGCAACACACCTCACCCTGCTACAGGTGCGTCACCTTCTTCGTT
AATGTACAAACACACACCGAGAAGTCACCTTCCAACACTTACAAAGCCGG
TACTCCAAAATCAACACGTCATTCAAAAGGACGCCGCCTACAAAAGTCAA
ACAAAATTGTACACCGACAAGAAACGTCGTGCTCACCATCACAACCTTCA
GCCTGGGCAACTTGTCTTATGCAAGAACCTCCGTCGACGTAGCAAGTCCC
AGCCATACTATGAGACCACTCCGTACGAAATTGTTCGCGTTCATCACAGT
GGCATCACCATATCCAATGGGAAGAAAACCTACTGCAGACACGCATCACA
CATCAAGGAATATTACCCTTCTCAAAACACAGCTGCTACCAAGTCGTCAA
CAGCACCGACACGTCAAACACAGCCAACCAGTACTTCCAGCACCTTCGCG
TCACTGACGGTAGAAGAAGAAATGCCACAACTCACTTCTGACTCAGAAAC
AGACTCTGACTCTGATTCATCAGAAATGGACACTATCCCATACAGAGAGG
AAATTAGTGATTTAGAAACTGTTGAACTTGGTGCTAATAATAGCACAGAA
CTAAAACGCTCAAGAAAGAAACCAACTTGGATGGAAGATTATGACACATG
AAATTTTTAGTATTTCTAGGAAAATAGTTTATATTTTTACATCCCTGTTA
TCGGTTAGACCCGATTTATGCCGTTCAGGTCCTCCAGAGAGTCGCACAGG
GTTTTGCCTTTGCTTGCCCCACTGTGCCTTCACAGTTCGTTTTGTTTGTT
TTCTTTTCGTAGCCTTTCAGTGCTGAGTTTGTCAAGACGGCATCCAGTAA
GGGAGGGATGTTATGTTTATATCCACAGCCACGGCTACCATCTTTGTTTA
GC Coding sequence (CDS) from alignment at sc0000095_pilon:122320..127021- >MSTRG.12516.2.p2 ID=MSTRG.12516.2.p2|Name=MSTRG.12516.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1920bp|location=Sequence derived from alignment at sc0000095_pilon:122320..127021- (Clytia hemisphaerica_ch_hm2_pilon)
GCTCATCAGTCAATATCATAGATGAATGGCAGCACAACTCCAGATTCCTA
TGGTCCAAAACTTCGACCCACGAGGAGATCCACAAACACTCAGCCAAAGA
TGGGAAAGATGGCAGAAATCGTTTACATACTTTATCACCGCATCTGGTAT
AGGAAACGATGCCAGAAAGAAGGCCCTCTTACTACATACAATGGGCACTG
AAACACAAGAACTTTTTGAAACTCTACCAGATACTGGACAAACATACGAT
GAAGCAGTCGAAGCACTTACGACATACTTCATACCACAGAAAAACGTTAC
ATTCGAGAGATCAGTTTTCAACAATGCAAACCAACAAACCCATGAGACAA
CTGAACAATACGTATCAAGACTACGCAAACTTGCTCAAAATTGCGATTAT
GGAAATTCTTTAAACGACCACATCCGAGACAGAGTAGTATCTGGCTGTAA
GGGCAGCAAGTACAGAGAGAAATTGCTTGCCGAGAAAAACTTAACCCTTG
AAAGAGTTATTGAAATCGGTCAATCCATGGAAGCAGCCAAATCCCAGTCG
AAAAGGATAGAACAATCTAACAACAAAGATCCACCTGACCACGTCAACAC
TTTAGACCGGCAGAACAACCGAAATTTCCGTGGAAGAGGAAGATCCAACA
TCCGTTTCCCAAGAGGAGGAAGTGGACCTAGAAATCGATCACAGGCACCA
CACCCATCAACCAGAGGAACCAACAGCCATCGTATCATGTGCGGAAGGTG
TGGAGCAATGGGCCACAAAGGTGAGGAATGTCGTAGATCCAAAAATTCGA
AATGCAACAAATGTGGCAAAACTGGACACTTTCAACGCATGTGTCTGTCC
AACCGTCAACAACCGATCAATAGACGAGGCGTAAATCAACTAGAGGAACA
GCCACCAGAAGATGACCCACCAACACCTGTCCAAGCAACCGACGAGGATC
TCGAAAACAGGCTCATCAGTCAATATCATAGATGAATGGCAGCACAACTC
CAGATTCCTATGGTCCAAAACTTCGACCCACGAGGAGATCCACAAACACT
CAGCCAAAGATGGGAAAGATGGCAGAAATCGTTTACATACTTTATCACCG
CATCTGGTATAGGAAACGATGCCAGAAAGAAGGCCCTCTTACTACATACA
ATGGGCACTGAAACACAAGAACTTTTTGAAACTCTACCAGATACTGGACA
AACATACGATGAAGCAGTCGAAGCACTTACGACATACTTCATACCACAGA
AAAACGTTACATTCGAGAGATCAGTTTTCAACAATGCAAACCAACAAACC
CATGAGACAACTGAACAATACGTATCAAGACTACGCAAACTTGCTCAAAA
TTGCGATTATGGAAATTCTTTAAACGACCACATCCGAGACAGAGTAGTAT
CTGGCTGTAAGGGCAGCAAGTACAGAGAGAAATTGCTTGCCGAGAAAAAC
TTAACCCTTGAAAGAGTTATTGAAATCGGTCAATCCATGGAAGCAGCCAA
ATCCCAGTCGAAAAGGATAGAACAATCTAACAACAAAGATCCACCTGACC
ACGTCAACACTTTAGACCGGCAGAACAACCGAAATTTCCGTGGAAGAGGA
AGATCCAACATCCGTTTCCCAAGAGGAGGAAGTGGACCTAGAAATCGATC
ACAGGCACCACACCCATCAACCAGAGGAACCAACAGCCATCGTATCATGT
GCGGAAGGTGTGGAGCAATGGGCCACAAAGGTGAGGAATGTCGTAGATCC
AAAAATTCGAAATGCAACAAATGTGGCAAAACTGGACACTTTCAACGCAT
GTGTCTGTCCAACCGTCAACAACCGATCAATAGACGAGGCGTAAATCAAC
TAGAGGAACAGCCACCAGAAGATGACCCACCAACACCTGTCCAAGCAACC
GACGAGGATCTCGAAAACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000095_pilon | genome | sc0000095_pilon:122320..127021 - |
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