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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000095_pilon:122320..127021- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12516.2.p1 ID=MSTRG.12516.2.p1|Name=MSTRG.12516.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4702bp|location=Sequence derived from alignment at sc0000095_pilon:122320..127021- (Clytia hemisphaerica_ch_hm2_pilon)
TGTTATGTTTATATCCACAGCCACGGCTACCATCTTTGTTTAGCATTTGA
GATTTCGTGCGTATTTACACGAATCGTATTTACTTCTAGCAAGACAACCA
TGAAGCCAAGATGGCGTCTAGCTGACTCAATTTATTTCTAAACCTACCTG
ATTTAAATCCACTTACTCTGTTACAATCCGTCCACAAAGAGACACAACAA
CTGGCGACGAAGATAGTCAACAGATCATAGAACACTATTTCAACAATATT
TGAGTGAATCAAGACTCAAATGGCAGCACAACTCCAGATTCCTATGGTCC
AAAACTTCGACCCACGAGGAGATCCACAAACACTCAGCCAAAGATGGGAA
AGATGGCAGAAATCGTTTACATACTTTATCACCGCATCTGGTATAGGAAA
CGATGCCAGAAAGAAGGCCCTCTTACTACATACAATGGGCACTGAAACAC
AAGAACTTTTTGAAACTCTACCAGATACTGGACAAACATACGATGAAGCA
GTCGAAGCACTTACGACATACTTCATACCACAGAAAAACGTTACATTCGA
GAGATCAGTTTTCAACAATGCAAACCAACAAACCCATGAGACAACTGAAC
AATACGTATCAAGACTACGCAAACTTGCTCAAAATTGCGATTATGGAAAT
TCTTTAAACGACCACATCCGAGACAGAGTAGTATCTGGCTGTAAGGGCAG
CAAGTACAGAGAGAAATTGCTTGCCGAGAAAAACTTAACCCTTGAAAGAG
TTATTGAAATCGGTCAATCCATGGAAGCAGCCAAATCCCAGTCGAAAAGG
ATAGAACAATCTAACAACAAAGATCCACCTGACCACGTCAACACTTTAGA
CCGGCAGAACAACCGAAATTTCCGTGGAAGAGGAAGATCCAACATCCGTT
TCCCAAGAGGAGGAAGTGGACCTAGAAATCGATCACAGGCACCACACCCA
TCAACCAGAGGAACCAACAGCCATCGTATCATGTGCGGAAGGTGTGGAGC
AATGGGCCACAAAGGTGAGGAATGTCGTAGATCCAAAAATTCGAAATGCA
ACAAATGTGGCAAAACTGGACACTTTCAACGCATGTGTCTGTCCAACCGT
CAACAACCGATCAATAGACGAGGCGTAAATCAACTAGAGGAACAGCCACC
AGAAGATGACCCACCAACACCTGTCCAAGCAACCGACGAGGATCTCGAAA
ACAGGTTTGAAGACATAATTATTTTCAAAATCGGCGGACATGAACTACCA
CTGTACTCCATAGACATTCTGAACACCAAAGTATCTGTACTTATCGACTC
AGGCTCATCAGTCAATATCATAGATGAAATTACATATAATTCGCTCGATT
CAAAACCGCAACTCACCAATTCATCTTCACGTATCTTCCCGTACCAGTCA
ACACACCCAATTCCAACGCTAGGAACCTTCTCAACCGTTATCAGAGCAGA
CGGACAAGATCAGCATGCAGAGTTCATCGTAGTTCAAGGTAACTCTGGCT
CAATCCTTGGCAGATCAACCGCCATTAGTTTAGACATTCTTCGAATTGGC
AAACCATCAGAACCAGAGCTCGTAAGATCATTATCAAGCAAAGAGTACAA
AGAAAACATTATGAAAAACCATTCAAAACTGTTCGAAGGAGTTGGTAAAC
TTCAAAACTTTAAACTACAACTTCACATTGATCCAAACGTCACACCAGTG
CAGCAGCCAATCAGACGCATACCGTTTCACTCAAGAGAGAAAATTGAAAA
TGAACTTGAGAGACTTATTAAATTAGACATCATTGAACCTGTTGATGGTC
CTACCACATGGCTTAACCCAGTCGTTGCTGGTAGTCGAAAAAACGGTAAA
ATCAGACTTTGTGTGGACATGAGAAAAGCCAATGAAGCAATTATCAGGGA
ACGTCACGTCATACCAAAACTAGAAGACATCACCGCAGAACTTCATGACG
CAACTCACTTCTCCAAGATCGACCTCCGAGACGGTTACCACCAAATCGAA
TTAGACGAATCATCAAGGAACATCACTACGTTCGCTACCCACAAAGGACT
ATTCCGGTACAAGAGACTCTTTTATGGTGTTAATTCTGGATTTGAAGCTT
TCCAGAAACAGATTGAAATTGTATTATCTGGATTGGAGGGAGTAAAGAAC
ATCTCCGACGACATAGTAATTTGGGGTAGAACACAAGAGGAACATGACGA
ACGGTTATATGCTTTACTAGACTGCCTTCTCAAGAACGGACTCCGAGTAA
ACCCAGAGAAGTGCATTTTCGATGTGCCATCGATCGACTTCGATGGACAT
ATCATCTCAGCAGATGGTATAAGACTTGATCCAACCAAGAAAGATGCTAT
TGATGCTATTAAACAACCAAAAAACGTTTCAGAAGTAAGATCGCTTATGG
GACTTATGAACTATTGTTTAAAATTTATTCCCAGTTACGCTACACTCACA
GAACCAATCAGACGTCTCACCAAGAAAAATGCAAAGTTTGAATGGGGTCC
AGAACAGTCAGAAGCATTTAAACTCTTAAAACAAAAACTTTTAGAGTCGC
CAACCTTAGCATTCTACAACCCGCTAGCTGAAACCAAAGTCGTCACTGAT
GCCAGTCCATTCGGACTAGGAGCCGTCCTTCTTCAAAAGCAACCGAACGG
AGATTTCTTACCAGTATCCTACGGTTCCAGATCACTGTCAGATGTTGAAT
CCAGATACAGCCAAACGGAAAGAGAAGCCCTTGCCGTAATGTGGGCTTGT
GAACATTACCACTATTATCTATATGATAGACTCTTTACCGTAGAAACCGA
TCACAAACCGCTACTGTCACTACTAACATCCAAGGCAAAACGTCCAACAC
CACGTATTCAGAGATGGCTACTCAGACTCCAAGCATACCACTACACAATG
TCGTACATCCCAGGTAAACTGAATGCAGCAGACATCCTCTCGCGTAGCCC
CATCAAGACAGCAGACCAAGAAAATCCTGCAGACCATCACATTGCTACAA
TCACCCGCCAAGCTGTCCCAGAATCGCTCTCCATCACAGAAATTGCAAAG
GAGACAGCCACAGATCAAACCTTGTCCACTGTAGTCAACAGCGTTATCAG
AGACAACTGGAGCAACAACCCAGACATCACGCCATTCCGTAAGATCAGAG
ATCAACTATCTGTATTTAATGGCATCCTTCTCAAGAACAACCAAATTGTC
ATACCTCAGTCGTTACAAAGGAAAATTCTCGACATCGCCCACCAAGGACA
CCAAGGTATTGTACGAACAAAGCTTTACCTCAGAGATCACGTATGGTGGC
CAAAGATCAACCAGCATGTAGAAGACCTAGTCAAACAATGTCATGCCTGT
CAAATCGTCATACCGAAACACAGCAAAGCCGAACCGTTAAAACCAACACC
ATTACCAGAAGAACCTTGGCAGCAACTCGGTATTGATCTCAAAGGACCGC
TTCCAGATCAGAACACATTACTCGTGATCCTTGACTACCACTCCAGGTAC
CCGATTGTTCATGTTCTCAACAAAGACACCACATCAGACCGAATCATTGA
AAAGCTGATGTCAACCTTTGCTATCTTTGGGTATCCTGAATCAATCGTCA
CAGACAACGGACCACAATTCATTGCATCCAACTTTGAAGAATTCCTCAAG
TCGAGAAACATCAACCACCGTAAAGTCTTGCCGTATCATGCAGCAGGAAA
TGGTGAAGTGGAAAGATTCAACCGTACCCTTGGCAAGTTCCTTCAAACAT
GCAGCGCCAATCGTACAGACTGGAAGAAGCAACTCGACTCATTCTTGTTA
TCCTACCGCAACACACCTCACCCTGCTACAGGTGCGTCACCTTCTTCGTT
AATGTACAAACACACACCGAGAAGTCACCTTCCAACACTTACAAAGCCGG
TACTCCAAAATCAACACGTCATTCAAAAGGACGCCGCCTACAAAAGTCAA
ACAAAATTGTACACCGACAAGAAACGTCGTGCTCACCATCACAACCTTCA
GCCTGGGCAACTTGTCTTATGCAAGAACCTCCGTCGACGTAGCAAGTCCC
AGCCATACTATGAGACCACTCCGTACGAAATTGTTCGCGTTCATCACAGT
GGCATCACCATATCCAATGGGAAGAAAACCTACTGCAGACACGCATCACA
CATCAAGGAATATTACCCTTCTCAAAACACAGCTGCTACCAAGTCGTCAA
CAGCACCGACACGTCAAACACAGCCAACCAGTACTTCCAGCACCTTCGCG
TCACTGACGGTAGAAGAAGAAATGCCACAACTCACTTCTGACTCAGAAAC
AGACTCTGACTCTGATTCATCAGAAATGGACACTATCCCATACAGAGAGG
AAATTAGTGATTTAGAAACTGTTGAACTTGGTGCTAATAATAGCACAGAA
CTAAAACGCTCAAGAAAGAAACCAACTTGGATGGAAGATTATGACACATG
AAATTTTTAGTATTTCTAGGAAAATAGTTTATATTTTTACATCCCTGTTA
TCGGTTAGACCCGATTTATGCCGTTCAGGTCCTCCAGAGAGTCGCACAGG
GTTTTGCCTTTGCTTGCCCCACTGTGCCTTCACAGTTCGTTTTGTTTGTT
TTCTTTTCGTAGCCTTTCAGTGCTGAGTTTGTCAAGACGGCATCCAGTAA
GGGAGGGATGTTATGTTTATATCCACAGCCACGGCTACCATCTTTGTTTA
GC Coding sequence (CDS) from alignment at sc0000095_pilon:122320..127021- >MSTRG.12516.2.p1 ID=MSTRG.12516.2.p1|Name=MSTRG.12516.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6396bp|location=Sequence derived from alignment at sc0000095_pilon:122320..127021- (Clytia hemisphaerica_ch_hm2_pilon)
GCTCATCAGTCAATATCATAGATGAAATTACATATAATTCGCTCGATTCA
AAACCGCAACTCACCAATTCATCTTCACGTATCTTCCCGTACCAGTCAAC
ACACCCAATTCCAACGCTAGGAACCTTCTCAACCGTTATCAGAGCAGACG
GACAAGATCAGCATGCAGAGTTCATCGTAGTTCAAGGTAACTCTGGCTCA
ATCCTTGGCAGATCAACCGCCATTAGTTTAGACATTCTTCGAATTGGCAA
ACCATCAGAACCAGAGCTCGTAAGATCATTATCAAGCAAAGAGTACAAAG
AAAACATTATGAAAAACCATTCAAAACTGTTCGAAGGAGTTGGTAAACTT
CAAAACTTTAAACTACAACTTCACATTGATCCAAACGTCACACCAGTGCA
GCAGCCAATCAGACGCATACCGTTTCACTCAAGAGAGAAAATTGAAAATG
AACTTGAGAGACTTATTAAATTAGACATCATTGAACCTGTTGATGGTCCT
ACCACATGGCTTAACCCAGTCGTTGCTGGTAGTCGAAAAAACGGTAAAAT
CAGACTTTGTGTGGACATGAGAAAAGCCAATGAAGCAATTATCAGGGAAC
GTCACGTCATACCAAAACTAGAAGACATCACCGCAGAACTTCATGACGCA
ACTCACTTCTCCAAGATCGACCTCCGAGACGGTTACCACCAAATCGAATT
AGACGAATCATCAAGGAACATCACTACGTTCGCTACCCACAAAGGACTAT
TCCGGTACAAGAGACTCTTTTATGGTGTTAATTCTGGATTTGAAGCTTTC
CAGAAACAGATTGAAATTGTATTATCTGGATTGGAGGGAGTAAAGAACAT
CTCCGACGACATAGTAATTTGGGGTAGAACACAAGAGGAACATGACGAAC
GGTTATATGCTTTACTAGACTGCCTTCTCAAGAACGGACTCCGAGTAAAC
CCAGAGAAGTGCATTTTCGATGTGCCATCGATCGACTTCGATGGACATAT
CATCTCAGCAGATGGTATAAGACTTGATCCAACCAAGAAAGATGCTATTG
ATGCTATTAAACAACCAAAAAACGTTTCAGAAGTAAGATCGCTTATGGGA
CTTATGAACTATTGTTTAAAATTTATTCCCAGTTACGCTACACTCACAGA
ACCAATCAGACGTCTCACCAAGAAAAATGCAAAGTTTGAATGGGGTCCAG
AACAGTCAGAAGCATTTAAACTCTTAAAACAAAAACTTTTAGAGTCGCCA
ACCTTAGCATTCTACAACCCGCTAGCTGAAACCAAAGTCGTCACTGATGC
CAGTCCATTCGGACTAGGAGCCGTCCTTCTTCAAAAGCAACCGAACGGAG
ATTTCTTACCAGTATCCTACGGTTCCAGATCACTGTCAGATGTTGAATCC
AGATACAGCCAAACGGAAAGAGAAGCCCTTGCCGTAATGTGGGCTTGTGA
ACATTACCACTATTATCTATATGATAGACTCTTTACCGTAGAAACCGATC
ACAAACCGCTACTGTCACTACTAACATCCAAGGCAAAACGTCCAACACCA
CGTATTCAGAGATGGCTACTCAGACTCCAAGCATACCACTACACAATGTC
GTACATCCCAGGTAAACTGAATGCAGCAGACATCCTCTCGCGTAGCCCCA
TCAAGACAGCAGACCAAGAAAATCCTGCAGACCATCACATTGCTACAATC
ACCCGCCAAGCTGTCCCAGAATCGCTCTCCATCACAGAAATTGCAAAGGA
GACAGCCACAGATCAAACCTTGTCCACTGTAGTCAACAGCGTTATCAGAG
ACAACTGGAGCAACAACCCAGACATCACGCCATTCCGTAAGATCAGAGAT
CAACTATCTGTATTTAATGGCATCCTTCTCAAGAACAACCAAATTGTCAT
ACCTCAGTCGTTACAAAGGAAAATTCTCGACATCGCCCACCAAGGACACC
AAGGTATTGTACGAACAAAGCTTTACCTCAGAGATCACGTATGGTGGCCA
AAGATCAACCAGCATGTAGAAGACCTAGTCAAACAATGTCATGCCTGTCA
AATCGTCATACCGAAACACAGCAAAGCCGAACCGTTAAAACCAACACCAT
TACCAGAAGAACCTTGGCAGCAACTCGGTATTGATCTCAAAGGACCGCTT
CCAGATCAGAACACATTACTCGTGATCCTTGACTACCACTCCAGGTACCC
GATTGTTCATGTTCTCAACAAAGACACCACATCAGACCGAATCATTGAAA
AGCTGATGTCAACCTTTGCTATCTTTGGGTATCCTGAATCAATCGTCACA
GACAACGGACCACAATTCATTGCATCCAACTTTGAAGAATTCCTCAAGTC
GAGAAACATCAACCACCGTAAAGTCTTGCCGTATCATGCAGCAGGAAATG
GTGAAGTGGAAAGATTCAACCGTACCCTTGGCAAGTTCCTTCAAACATGC
AGCGCCAATCGTACAGACTGGAAGAAGCAACTCGACTCATTCTTGTTATC
CTACCGCAACACACCTCACCCTGCTACAGGTGCGTCACCTTCTTCGTTAA
TGTACAAACACACACCGAGAAGTCACCTTCCAACACTTACAAAGCCGGTA
CTCCAAAATCAACACGTCATTCAAAAGGACGCCGCCTACAAAAGTCAAAC
AAAATTGTACACCGACAAGAAACGTCGTGCTCACCATCACAACCTTCAGC
CTGGGCAACTTGTCTTATGCAAGAACCTCCGTCGACGTAGCAAGTCCCAG
CCATACTATGAGACCACTCCGTACGAAATTGTTCGCGTTCATCACAGTGG
CATCACCATATCCAATGGGAAGAAAACCTACTGCAGACACGCATCACACA
TCAAGGAATATTACCCTTCTCAAAACACAGCTGCTACCAAGTCGTCAACA
GCACCGACACGTCAAACACAGCCAACCAGTACTTCCAGCACCTTCGCGTC
ACTGACGGTAGAAGAAGAAATGCCACAACTCACTTCTGACTCAGAAACAG
ACTCTGACTCTGATTCATCAGAAATGGACACTATCCCATACAGAGAGGAA
ATTAGTGATTTAGAAACTGTTGAACTTGGTGCTAATAATAGCACAGAACT
AAAACGCTCAAGAAAGAAACCAACTTGGATGGAAGATTATGACACATGAA
TGACCCACCAACACCTGTCCAAGCAACCGACGAGGATCTCGAAAACAGGC
TCATCAGTCAATATCATAGATGAAATTACATATAATTCGCTCGATTCAAA
ACCGCAACTCACCAATTCATCTTCACGTATCTTCCCGTACCAGTCAACAC
ACCCAATTCCAACGCTAGGAACCTTCTCAACCGTTATCAGAGCAGACGGA
CAAGATCAGCATGCAGAGTTCATCGTAGTTCAAGGTAACTCTGGCTCAAT
CCTTGGCAGATCAACCGCCATTAGTTTAGACATTCTTCGAATTGGCAAAC
CATCAGAACCAGAGCTCGTAAGATCATTATCAAGCAAAGAGTACAAAGAA
AACATTATGAAAAACCATTCAAAACTGTTCGAAGGAGTTGGTAAACTTCA
AAACTTTAAACTACAACTTCACATTGATCCAAACGTCACACCAGTGCAGC
AGCCAATCAGACGCATACCGTTTCACTCAAGAGAGAAAATTGAAAATGAA
CTTGAGAGACTTATTAAATTAGACATCATTGAACCTGTTGATGGTCCTAC
CACATGGCTTAACCCAGTCGTTGCTGGTAGTCGAAAAAACGGTAAAATCA
GACTTTGTGTGGACATGAGAAAAGCCAATGAAGCAATTATCAGGGAACGT
CACGTCATACCAAAACTAGAAGACATCACCGCAGAACTTCATGACGCAAC
TCACTTCTCCAAGATCGACCTCCGAGACGGTTACCACCAAATCGAATTAG
ACGAATCATCAAGGAACATCACTACGTTCGCTACCCACAAAGGACTATTC
CGGTACAAGAGACTCTTTTATGGTGTTAATTCTGGATTTGAAGCTTTCCA
GAAACAGATTGAAATTGTATTATCTGGATTGGAGGGAGTAAAGAACATCT
CCGACGACATAGTAATTTGGGGTAGAACACAAGAGGAACATGACGAACGG
TTATATGCTTTACTAGACTGCCTTCTCAAGAACGGACTCCGAGTAAACCC
AGAGAAGTGCATTTTCGATGTGCCATCGATCGACTTCGATGGACATATCA
TCTCAGCAGATGGTATAAGACTTGATCCAACCAAGAAAGATGCTATTGAT
GCTATTAAACAACCAAAAAACGTTTCAGAAGTAAGATCGCTTATGGGACT
TATGAACTATTGTTTAAAATTTATTCCCAGTTACGCTACACTCACAGAAC
CAATCAGACGTCTCACCAAGAAAAATGCAAAGTTTGAATGGGGTCCAGAA
CAGTCAGAAGCATTTAAACTCTTAAAACAAAAACTTTTAGAGTCGCCAAC
CTTAGCATTCTACAACCCGCTAGCTGAAACCAAAGTCGTCACTGATGCCA
GTCCATTCGGACTAGGAGCCGTCCTTCTTCAAAAGCAACCGAACGGAGAT
TTCTTACCAGTATCCTACGGTTCCAGATCACTGTCAGATGTTGAATCCAG
ATACAGCCAAACGGAAAGAGAAGCCCTTGCCGTAATGTGGGCTTGTGAAC
ATTACCACTATTATCTATATGATAGACTCTTTACCGTAGAAACCGATCAC
AAACCGCTACTGTCACTACTAACATCCAAGGCAAAACGTCCAACACCACG
TATTCAGAGATGGCTACTCAGACTCCAAGCATACCACTACACAATGTCGT
ACATCCCAGGTAAACTGAATGCAGCAGACATCCTCTCGCGTAGCCCCATC
AAGACAGCAGACCAAGAAAATCCTGCAGACCATCACATTGCTACAATCAC
CCGCCAAGCTGTCCCAGAATCGCTCTCCATCACAGAAATTGCAAAGGAGA
CAGCCACAGATCAAACCTTGTCCACTGTAGTCAACAGCGTTATCAGAGAC
AACTGGAGCAACAACCCAGACATCACGCCATTCCGTAAGATCAGAGATCA
ACTATCTGTATTTAATGGCATCCTTCTCAAGAACAACCAAATTGTCATAC
CTCAGTCGTTACAAAGGAAAATTCTCGACATCGCCCACCAAGGACACCAA
GGTATTGTACGAACAAAGCTTTACCTCAGAGATCACGTATGGTGGCCAAA
GATCAACCAGCATGTAGAAGACCTAGTCAAACAATGTCATGCCTGTCAAA
TCGTCATACCGAAACACAGCAAAGCCGAACCGTTAAAACCAACACCATTA
CCAGAAGAACCTTGGCAGCAACTCGGTATTGATCTCAAAGGACCGCTTCC
AGATCAGAACACATTACTCGTGATCCTTGACTACCACTCCAGGTACCCGA
TTGTTCATGTTCTCAACAAAGACACCACATCAGACCGAATCATTGAAAAG
CTGATGTCAACCTTTGCTATCTTTGGGTATCCTGAATCAATCGTCACAGA
CAACGGACCACAATTCATTGCATCCAACTTTGAAGAATTCCTCAAGTCGA
GAAACATCAACCACCGTAAAGTCTTGCCGTATCATGCAGCAGGAAATGGT
GAAGTGGAAAGATTCAACCGTACCCTTGGCAAGTTCCTTCAAACATGCAG
CGCCAATCGTACAGACTGGAAGAAGCAACTCGACTCATTCTTGTTATCCT
ACCGCAACACACCTCACCCTGCTACAGGTGCGTCACCTTCTTCGTTAATG
TACAAACACACACCGAGAAGTCACCTTCCAACACTTACAAAGCCGGTACT
CCAAAATCAACACGTCATTCAAAAGGACGCCGCCTACAAAAGTCAAACAA
AATTGTACACCGACAAGAAACGTCGTGCTCACCATCACAACCTTCAGCCT
GGGCAACTTGTCTTATGCAAGAACCTCCGTCGACGTAGCAAGTCCCAGCC
ATACTATGAGACCACTCCGTACGAAATTGTTCGCGTTCATCACAGTGGCA
TCACCATATCCAATGGGAAGAAAACCTACTGCAGACACGCATCACACATC
AAGGAATATTACCCTTCTCAAAACACAGCTGCTACCAAGTCGTCAACAGC
ACCGACACGTCAAACACAGCCAACCAGTACTTCCAGCACCTTCGCGTCAC
TGACGGTAGAAGAAGAAATGCCACAACTCACTTCTGACTCAGAAACAGAC
TCTGACTCTGATTCATCAGAAATGGACACTATCCCATACAGAGAGGAAAT
TAGTGATTTAGAAACTGTTGAACTTGGTGCTAATAATAGCACAGAACTAA
AACGCTCAAGAAAGAAACCAACTTGGATGGAAGATTATGACACATGAATG
ACCCACCAACACCTGTCCAAGCAACCGACGAGGATCTCGAAAACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000095_pilon | genome | sc0000095_pilon:122320..127021 - |
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