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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000095_pilon:103562..107340+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12514.1.p1 ID=MSTRG.12514.1.p1|Name=MSTRG.12514.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3779bp|location=Sequence derived from alignment at sc0000095_pilon:103562..107340+ (Clytia hemisphaerica_ch_hm2_pilon)
AAATGAAcgacttcaaaacaaaaattccgaagaaaaaaaacataccatGC
CATAAACAggtagccagtaccttcccacaaaccaaattttttctttgttt
tatggtcagttacACTTTGAAGCGTTTGTCGAAAGTTATCGCACTGTGGT
GGAGGGTGACGTCGATCCCGTGCGGAGTGCATAAGGGCGGGAAAACACGG
AACTCGAAAATAAAGACTGGAACGGACAATCGAATAGGTAGGAGAGGATG
TGCGTTGATGTTCAATCTAGTCTCAATTTTTTAGTTCCGtgcattaaaat
caaaacaaaagaatcctcggGATCGGGATGGAGTTTGGTgagctgaaaat
gtttttttttgaaattattttgatacaaaaatgttactatagaagcaaaa
aagtttccaaaagtcTTCAAGCAGCTCCAATTAATGGTATTGTCAACAGG
CTCTTAATTTAGAAAGGTAATGAGATAATCCCACttcttcaaaaggtttt
cttccttgtagagaaaagcaaccaaaatcaaataaaagaaacaacACTAG
CCATAGCCAGTTtttgaaacagggatgtaaaataaaaaataatgaggaTT
CCAAGACTATCATTTGATGGAAATGAGTCGATCTCGTGCAATCTCAGGAT
TAAGAggtacaaataatagaaatatatcATTAATGTATTTACCAAATAAT
TTAGCAAAGTTCTAAAAAGTTGTAATAAAACTATGTCAATGACTATAAca
tcttaaaaatataaatttataggAAAGTTAgataaaactaataaaattta
gGTAGATTCCTCTCACAATTCGAAGCAAAACCTCCACATTTTACTGGCTT
ATACTATCtagtttccaaagttgagaaattcaaatctaaaatctgctcga
gatctcaaaaaattaattagtagTTTTAACTCTGATTATACAGGACCAAA
CTCTTcacattaaaatgtaaaaattctagaataatatcataaaaataGTG
TCAAGTTTTGGCAATTGTCCAGAATTGTCTAGACTTGTCTATGTCACTGG
TGAAGACAGCtgtgaagaaagtttttcatttccatTCCCAGCAAACTTtc
gaatcgaatacaatcaaatttcacCTTACTTTCAATCATATGTCAATtta
ctttccaccattttattaatggaatattttcaaactagcgAACAGATAGA
GACCACATCgaacagccaataaaaacaataacaaacaaacagttcttctt
tccactggaataggccaggaataaacaaaataaattcttccaggtttCAT
GCCCGCCATCCCAAAGCATACAAAAAGTACAAGTTCGTCTTCAATCATCA
TTGGATTGCAGCACTTATGGTTCTAGGTAGGATATGATCTAAtctgattt
gataattttcattctCAATGTTTACAGTCTCTGGGATTCTTCAATCCTGT
TATGGAAATAACCCAACAACTCTGCTGCTGTTGAtgcaaaaaaccaaaaa
aaaggatttccatcttcttttctcCTCCATCCACTGATACTGTTTCTTTT
TCGTTcggtttcaacttttcaaaacaaatgattttttggttctctctcaa
aaaaatttcaaaattcgaatcacaaaattcgaattgcaaaattcgaaagt
tcgaaaatctatttgaacTTTACCGATCGAAgcaatgcagcgacttctta
aaaaacgaaaaaagcacACGCGATGGAGTGCAGCTTGTCCAAAGTCACGG
CAAAATGAGCTGCGCCGAAGAGAAAAGCTTGGACGGACTTTCCCGTCCAA
GAACATTCGATTCCACGGCAAAAATTAACAgacgttaaatcgcgataaaa
aagcggttttcgtctaacaggctaatAAACAGGTGGCAGAGAAGAAATAG
AATGGACGAGAAAAATAACGGCGTCACCCTCACCGAACAGCAAAAAGCCG
ACGATTATTTTACGTTGCCGGGCGTCAATCGGCCGATTAACCCAACCGAC
CCACTCAACTTACGGGAAGTTCATTTTGTAGAGAAAGCACTTTGGAAATT
AGAGGAGACGAAGAAAAGGCAAAGGAGCAATGACGACGAAGATGGGAAAT
CATGTCACAATAAACTGATGCGAGGACAGAGTAATGAGAGTCTGAGTCGA
GTACCGAGGGGTATTTATACTTCATATGCAGATGCAGTGAGAGGAAACAC
ATATTGGAATGGAAATAACTATCAGCAATATCAAACAGGTAAAAAACCTT
TTAGTGGAACTGAACCATCTCTGCATTAGCAAGATCTGGCAAGATTAGAA
TTATGTGTGACTGGCGTAACAGGAGGAAACAGCTCACTCCTTTTTGTGAA
ATGAATATAGGCTGACTCGGCAAAATCCAGTTAGGCACTATATCAACCAA
ATCTCAAGCTTCAACAAAATGTCAAGTAACTAACTGACATAATGTTAACC
aacgaaataaaaacaaatacaaattATGCGCAGGACTAAATTCATCTTGA
TGTACACTACATTCAAAGGGTGGGATAAAATTGTATGTAGTTTTTGATCG
AGCGGTTATCTTACCCATCTTGTTTTGGGCAGGTTTTTTAAGAAGCAATT
TAAACAGAGAAAATATCATGAAATCATCTTGCGCACTCTCCCCTcttatt
ttatacaaatttcCTTCCACTAGAAGAGTGCATCTAATTTTCGACATCCC
TCTAAAGAGTATTTGTCAAGTTAGAACGCTACTATgggtaggctgcacgc
atcccctctgatatgttttaccaggggtaacctgtttcaattttcttaaa
aaggttttgaaatccCATGATTGTACTAGCCATTCAAATtcttaattcaa
atttaatgaaattttaagatatctcaagctaatcaagtttttaagattca
aaaacacaaagacgggggtaactctCGTAGGGAATTTGAAACACGATACG
CATCctgtatatcaaaacatatcagaggggatgcgtgaaCCCTACTACTG
CAGACGGAGTTGGTTTATTTATTGAACTTACCGATGACAACAAGATTGAT
GAGTTCTTTCCCAGATTGTCGTTTCTTCAACTCACTTGGTATATCAATCA
CCTGGTGAAAGAAAAACGATCAAAATATTAATCTAATATAGCACAACCGA
TATGCATGCAAGCCTCAGGAGACTGGGTTCAAATTTACCAGGAAGGATTT
ACGTCAAatgtttaaaagttgaaaagttcttACGCCCCTTTCTCATAAAC
TTGGCTCAGTTCCTTTTGTTGCGTTTAGAGTGGATAAATGTATAAAGAGA
AGGCTAGATAAACAGTGTGAACATGATTAGTGTTCAGGGTACATCGTGGG
AGTGTTTCAAAAGGGCACAAAATTGATGTGCAATGGTCCCTGGTCGGTGC
CTGATTTAACACCACGTGGTTGCCGCTCACCTATTTTTTCTTTACTTGGT
GATTCATTTCGTTCgaatattaattaaaacaagACATACAGtgaattcga
aacccgtgtgaCAAATcgaatcttttctttttattttgtagcACACCTAC
CTAACCGACTGTCTATGACGGAGAAACCTTATTGGTACGACATGCCTTGC
ACCAATTACTATTGAGCCATTCTAGCCAAAAAGAAGAACCAACATTTGCA
TAACACgccaaatgatttttttaatctatTATATCCACATTTAtattata
aatcataaatagTATGAAAAGGAACGACTATCTTAtaaatttttacatat
tctttATATCAATCTCGAGATAATCTTAT Coding sequence (CDS) from alignment at sc0000095_pilon:103562..107340+ >MSTRG.12514.1.p1 ID=MSTRG.12514.1.p1|Name=MSTRG.12514.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=822bp|location=Sequence derived from alignment at sc0000095_pilon:103562..107340+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACGAGAAAAATAACGGCGTCACCCTCACCGAACAGCAAAAAGCCGA
CGATTATTTTACGTTGCCGGGCGTCAATCGGCCGATTAACCCAACCGACC
CACTCAACTTACGGGAAGTTCATTTTGTAGAGAAAGCACTTTGGAAATTA
GAGGAGACGAAGAAAAGGCAAAGGAGCAATGACGACGAAGATGGGAAATC
ATGTCACAATAAACTGATGCGAGGACAGAGTAATGAGAGTCTGAGTCGAG
TACCGAGGGGTATTTATACTTCATATGCAGATGCAGTGAGAGGAAACACA
TATTGGAATGGAAATAACTATCAGCAATATCAAACAGcACACCTACCTAA
CCGACTGTCTATGACGGAGAAACCTTATTGGTACGACATGCCTTGCACCA
ATTACTATTGAATGGACGAGAAAAATAACGGCGTCACCCTCACCGAACAG
CAAAAAGCCGACGATTATTTTACGTTGCCGGGCGTCAATCGGCCGATTAA
CCCAACCGACCCACTCAACTTACGGGAAGTTCATTTTGTAGAGAAAGCAC
TTTGGAAATTAGAGGAGACGAAGAAAAGGCAAAGGAGCAATGACGACGAA
GATGGGAAATCATGTCACAATAAACTGATGCGAGGACAGAGTAATGAGAG
TCTGAGTCGAGTACCGAGGGGTATTTATACTTCATATGCAGATGCAGTGA
GAGGAAACACATATTGGAATGGAAATAACTATCAGCAATATCAAACAGcA
CACCTACCTAACCGACTGTCTATGACGGAGAAACCTTATTGGTACGACAT
GCCTTGCACCAATTACTATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000095_pilon | genome | sc0000095_pilon:103562..107340 + |
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