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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000094_pilon:1246115..1249297- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12501.1.p1 ID=MSTRG.12501.1.p1|Name=MSTRG.12501.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3183bp|location=Sequence derived from alignment at sc0000094_pilon:1246115..1249297- (Clytia hemisphaerica_ch_hm2_pilon)
CGCATTCTTTAGTAAAATTTGAGCCAACCAGAAAGCTTAGGGAAAATCAA
TTATGACTTACAAAGGAATTGTGATGGAATCAAAAGAAATCGTGCGATTA
TCATTGTATTTCTTAATCGATTCTCCCCTAGATGTAAACCCACCAACAGT
CTGCTGCTAGACATTAATATGGTAATATTTGCTCTTCATCTTTGATTCTT
TTTACTGTAATTAGATTGACAAATGCGCGTTAAATTTTTATTATTGATCT
TCACTTCAGAGGTTTTTTTCTTTGAAAACTCAACCTCTGATGCTCATGGC
AGTGAAAGTGAAGTTTAAAAGTTCTGTTACAGTGATAATGGTTCTAACGA
GACAACACCTAGCAAAAAGAGATTCATGATTAAAAAGCTTAAAAAATCGT
TTTCCTTTCTGTTTTCTTTAGATACCAGAAAAAGTATCAAGATTCAAGTA
ATAAGAGGCTGTGCATATCACCACCATGTTACACCTACTCCGTCGAAGAA
GTTCAATCTTTATCTGCATTTGTCTTTTTGTTGTGCTCACCTTCCGTAGT
TTATTTGCGTCAATCAAAATACAAAGCTCGAAATTGTCAGTAACTGAAGA
TCTAAACAAGCTTAACTTAAACAACTCTATTGATCCGATAGAGAAGGCAC
AAATCTTAATGGAAGTTGGGAGCCTTGTTGGGGACAAAACCTTACATTTC
TGTCCGTTATTTTTCATCAATTTCATGCGGAATAATGACCAAAAAGTGAA
TGAACCAGAGCTTTCGAGCTATAACAAAGGCATGTGCAAAAAACAAAGAG
GACCGCAATGTGAAGCTAAATATCTTCAAGGCCCTTTAAAAGTTAGCAAG
GAAATATTAAGTATGGAATGGCTTCACAAAAATGAACTTTCATTTGTTAA
AACAGGTGGTTGGTACATGCCTACAGGATGTGATATCAGCACCCGTACGG
CTATCATAATTCCATTCCGTAACCGCGAACAACATCTCCCCGTAATGTTA
CGTCAGTTACACGCCGTGTTGCGCAATCAGCAAATTCATTACCGTATTTT
TGTGATTGAACAATCGGACGAACATCCGTTCAACCGTGGTAAAATACGTA
ATATTGGTTTCAAAGAAGCGTTACGTTATTTCCCGTATACATGCTTCGTT
TTCCATGACGTAGATCTTGTTCCAGAGAATGATGGTATCTTTTACGACTG
TCGCAAATCTCCTGCACACATGTCGGTAGCAGTGGACACGTTAGGTTATA
TGCCTCTTCAATATGAACATTTTGGAGGAGTTGTATCAACAACAAAAGCA
CACTTTGAACTTGCAAATGGTTACTCGAATATATTTTGGCAATGGGGTGG
CGAAGACGATAATGTATCTCATCGGTTACGTAAAAACGGTTTGAAAATAC
ATAGGCAACCAAAAAATGTTGCTAGATACAAAATGTTAAGTCATACACCA
GCGAAACGCGAAGTGCAATTAGCACGTACTGTTTTCTGGACAGAAGCGAC
TAAATATGGTGATATCGATGGTTTGAATTCGTTAAATTATCGTCTTTTAA
ATCGGACCGATGAATTGCTATTTACTAGAATTCAAGTAGATGTTTTGAAA
AAAGTTTTTTAGGTATGTTTTATCACAAGTACTGTGTACCAGAGTGGTTT
ATCTCGCTTCGTAGTACACTCTGTGCGCATTGTCTGTTTGATAAAGATTT
CCCGTACGGAGACCTCTGGGATGAAATATGATTTATGAATAGAAAAAGAC
TTCTGGGACTTCCGTCATCATCTCCCTCTCTCACAAACACTTTATCGCAG
CGGTCGGTTTGAAAAACCGAGAAAAGACAATGACAACAGACCCTCTACGG
CAATGAATTTTGAAATTAGCCGTATATGCATGGTCATGTGGGTTTGATTC
TCTAGCTGGGTCGTACCAAAGATTCCCAAAATTTTGAAAATTTTGACCCT
TTGCGACCCTTTTTTAATTGTTACCCATCACCTATTTTATCTATGTATCA
AGGGAGGGGGTCAGTTATAAGCGAGAAATGATATCATGTACCATGTACAA
TTTTATGCTCAGAAATGTTTTCTTTTCATTCCTAATATAGTAAATTAGGT
GCTAGTTTGAGGACTGTAATATAGAAAAGTAAAGAGATACAATTAAGGTC
ATAATATATTGAGAATTTTGGTTATTCTAACGTTTTTCAAGATTTAAAGT
TCTGGCGAGAAAGTTGATTTTTGGCTATCTTTTTAATTTAATCGAATATT
TCAATTTGGGAGGGGTTGGCAGACTTCCAGGCTATATTCTGAGTCTTATT
GGACTATTTTTGAACTTTTGGATCCTCAGATCCTAAGCTCTTAAGTCTCA
TGTTAAAACTCAGAGTTAAAACTCTACCCTTCCAACCTACTTTAGAGCAC
TTACAAATCGATTGTGGTTCAAAAACTTCCTGGTGGATTTCCCTTTTTTC
TCAAATATTATGACCTTGATTGTAGATCCTTCTAGTTCAATGTTTTCTTC
TAGACTACTCTGTTCGTGTGGTTTCGAACACAGATATCTGTAAAGCCCGA
AGGGCTAGATAGGCAACTTTAAGCTTTCTCCAGCAAAAAAAAGTGAAGCA
AAAATTTGACTTTTTAAATTTCGTGCCGATGGATAGGATCTAGCATTTTA
ATTGTTTTTGGAGCGTGAGATCAAAAAAAGTAGGCGGCAAACGCTATTTC
ACATCTCTCAAACCAATGAAATTGCATATTTTAGTCACGTGACTTTGGTA
GGAAATCCTTCCAAACCTAGGCTTCACTTTTCGATAAAAGCCGCAAATCT
AGCCCTTCGGGCTTTACAGATCTGTGGTTTCGAAGTATAGCATTTAGTTA
AAACGACTAATAATATAGAAATCTTGATAGAAATAACAGAGTAGCCGGGT
ATTTTTGTAGATGCCAAATCTGTCCACAGAATTCCTATTGGCTGTTAAAC
AATTGTTGAAACCACGTGATATTATTGTTTTGATTGGAAGTGCCCGAATC
TGATTGGCTAACCTTATCAACGGCTTTTTTGGCACGAAATTCAAACCAAG
TGTAAACAAATTCAAACTGGGTCATAAATACCATACTCTCAATGAGTAGC
TTTTGATGGGATTTTTGCTTATGTGTTGTAAGTTTGAATAGAGAGTGTGG
ATCTCCAGACTAATTTTCACCCTGAAAAGTGGC Coding sequence (CDS) from alignment at sc0000094_pilon:1246115..1249297- >MSTRG.12501.1.p1 ID=MSTRG.12501.1.p1|Name=MSTRG.12501.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1137bp|location=Sequence derived from alignment at sc0000094_pilon:1246115..1249297- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTACACCTACTCCGTCGAAGAAGTTCAATCTTTATCTGCATTTGTCT
TTTTGTTGTGCTCACCTTCCGTAGTTTATTTGCGTCAATCAAAATACAAA
GCTCGAAATTGTCAGTAACTGAAGATCTAAACAAGCTTAACTTAAACAAC
TCTATTGATCCGATAGAGAAGGCACAAATCTTAATGGAAGTTGGGAGCCT
TGTTGGGGACAAAACCTTACATTTCTGTCCGTTATTTTTCATCAATTTCA
TGCGGAATAATGACCAAAAAGTGAATGAACCAGAGCTTTCGAGCTATAAC
AAAGGCATGTGCAAAAAACAAAGAGGACCGCAATGTGAAGCTAAATATCT
TCAAGGCCCTTTAAAAGTTAGCAAGGAAATATTAAGTATGGAATGGCTTC
ACAAAAATGAACTTTCATTTGTTAAAACAGGTGGTTGGTACATGCCTACA
GGATGTGATATCAGCACCCGTACGGCTATCATAATTCCATTCCGTAACCG
CGAACAACATCTCCCCGTAATGTTACGTCAGTTACACGCCGTGTTGCGCA
ATCAGCAAATTCATTACCGTATTTTTGTGATTGAACAATCGGACGAACAT
CCGTTCAACCGTGGTAAAATACGTAATATTGGTTTCAAAGAAGCGTTACG
TTATTTCCCGTATACATGCTTCGTTTTCCATGACGTAGATCTTGTTCCAG
AGAATGATGGTATCTTTTACGACTGTCGCAAATCTCCTGCACACATGTCG
GTAGCAGTGGACACGTTAGGTTATATGCCTCTTCAATATGAACATTTTGG
AGGAGTTGTATCAACAACAAAAGCACACTTTGAACTTGCAAATGGTTACT
CGAATATATTTTGGCAATGGGGTGGCGAAGACGATAATGTATCTCATCGG
TTACGTAAAAACGGTTTGAAAATACATAGGCAACCAAAAAATGTTGCTAG
ATACAAAATGTTAAGTCATACACCAGCGAAACGCGAAGTGCAATTAGCAC
GTACTGTTTTCTGGACAGAAGCGACTAAATATGGTGATATCGATGGTTTG
AATTCGTTAAATTATCGTCTTTTAAATCGGACCGATGAATTGCTATTTAC
TAGAATTCAAGTAGATGTTTTGAAAAAAGTTTTTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000094_pilon | genome | sc0000094_pilon:1246115..1249297 - |
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