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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000094_pilon:1233529..1235973- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12500.1.p1 ID=MSTRG.12500.1.p1|Name=MSTRG.12500.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2445bp|location=Sequence derived from alignment at sc0000094_pilon:1233529..1235973- (Clytia hemisphaerica_ch_hm2_pilon)
TCAGTGGAGACAGTTAGTTTTGGATTTTTCTAAATGTTGACTGACTGAGG
ACGATGGTAAATCAGAATTATTACCGTCCTAGATTCTGCGGGTCAGGCAC
TAAACCGTTCTCAAAGGAGTAGATACATAAATTCGCTACTATCTGATGTA
ACCAAAAGAACAATGTAAGAGAGAAATGAAATTTAAAGAGGGAAAACAAT
CTGTTTTCAATTTTACCCGATGATTTTGTTTCTTTTTTTCTAGACAATGC
AATAAGAACACAGAATTTTCTTCATCACAAACAATATTGATAAACATCAA
TTGACAATGGTTCTGGCACCACCCCCGGATTTTAATTTACTACTTTCAAC
AGATCGTATCTTGAAATTTGAGCCACTATTAAAAGATACCAAACTCTTTG
GAGATAAAGATACTGAAGTTAACGAAGGAGGAGATAACACCTCTGAACGT
TCTGGTAAATGTACCACATCAACTGAATATCCTGTAGAATCTAACAAGGA
TTCTACTGAAAGTGAAAGTAAGAATGGAAATACTGAGAAAGTACAACTGT
TACCTCAGAAAACTATAAAAGAGCGAAACGAATGCATATATCCGGAGGAA
AATCAACAAGATTTTGAAAATCAATCTATCAGCGTTGGGGACTCTAAAGC
TACAGTGAATAAACAATCAAAAGGTGTGTTTGATCGAATTAGGAGTGAGG
ATAAATCTTCCAAAACCGTTAACCAGGGGGTGGTCCCTTCAATAGAATCA
TCTTCTAAAAGTGATACAAACTCTGATCGGATCAAGAGGAAAATTAGTAA
CAATCTAATACGTATTGACGATAGTTGTAAGGAACTTCAGAACACAATTT
TAAGTCAAAATCAAGACATTATTTGTGAAAGTGAGGAGAAGAACGAATCT
TTTGGGCGAGATCAAATTAGCGGCGTTGGCGTAGAGACTACCCCTCACCA
GGACGATAACCTTCAAAGCCAGTCAAAAGAGAAAACAAAACGTATCATGC
TCAAAGATACTAGCCAGGATACTATAAAACCACCAGCGATTCAACTTCAA
AATAGTTTAGATTTTGAAGATATTCAACCTCGGAAAAGATGCAGCCCTAC
AATGGTGTCGAAAGATAAACCAATGAAATTTTATTCAAGATACAGTAGTA
GTCAGGAAAGCCTGGGTTCTAGAAATTCATCCATGAGTAGTATTGGGTAC
GAAATTAAACGAAACTCAAGTCCTGAGGTTTTATCCATTGAAAAGACTAG
TAGCGGATCACCTCAATTCTTATCGAAGAGTATGACGAATTTGAGCTACC
GTAAAATGCTCAGCGAGGATGAAAATCATCATTCGCGTAAAAGACTTTCC
AACTTTTTTTCATCCCGCAATAGCATTCACGAGGGTGACCATAACAATGG
ATTACGTACTGAAAGTCATTGGCCTAAACCACGCACGCCATCCCTGTTTC
GACGATTCAGTATGAAAACACCACAGAGCACAGAGCATGCGCAGAGCTAT
ATAAATGTAATCGTGCCTGAGGTTAATATATTAGATGATTCCGAGAGTTC
GACAAATAATGGCGGAAGAACTTCAGGGAAAGGTATATTTCGAAATCTTT
CATTCCGGTCGGCTACCAGATTGAATTTAGAAAATCTGCAAGAAGATGCA
GTGCATTCGTTGAAGCCACCACCACCACAAGCGAAAAGTTTTCCTGGGTT
AAAATCACCTTTCTCTCGCTCCAAGTTCGAACGCAATACGGCCGAAATGC
GAAAGAGAGTTTATGATGAAATGTTAAAGAGTATTCAAGATGGCGACTGC
AAGAGATTGAAATTATTGTTAAAACGCCGGCGAACAGATATAAACACTTT
GGAACATAACCATTCTTTGATTCATGAAGCAGCTTATAAGGGATGTATGA
AATGCGTGAAAGCTTTAATCAAGTCAGGCTGGTCTGTAAACTTATCTGAC
GAGGCAGGTTGGAAACCAATACACTCAGCTGTTTTTGGGGAAGACTTAGA
GACGGTGAAATGTCTTTTACAGAAAGACGTCGATGTCAACATCATAACGA
TTGACGGATACACGCCGTTACATTTCGCCATTTATAACGACGATTTATAT
ACGACGTATGAGTTGATTCAACATGGCGCTGATCCACAGTTTCAAAGTAA
ACATGAAATCGCAACTCCATTCCAATTGGCTATCAACCTTAAAAGGACTA
CTATACTAGACTATTTGTTGATGTTGGCTTGCTTTCGAAGTGTATAGAAT
GGGGTGGAATGGTAACCATTGTTTCTTTTGCATTTGTCGTCCGGTTGTAT
TACCCATATATTTTTTAAATAAAGAATTCTTGGCATTATGGGTAAAGTCA
TGTGACACATTTTCTTTATTGTGCTTAAAGTTTTTTAAATTTGTAAATGT
TTATTTAAAAAAAGTCATATTCATAAAAGGTGTTAATGGTTTGAT Coding sequence (CDS) from alignment at sc0000094_pilon:1233529..1235973- >MSTRG.12500.1.p1 ID=MSTRG.12500.1.p1|Name=MSTRG.12500.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1941bp|location=Sequence derived from alignment at sc0000094_pilon:1233529..1235973- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTCTGGCACCACCCCCGGATTTTAATTTACTACTTTCAACAGATCG
TATCTTGAAATTTGAGCCACTATTAAAAGATACCAAACTCTTTGGAGATA
AAGATACTGAAGTTAACGAAGGAGGAGATAACACCTCTGAACGTTCTGGT
AAATGTACCACATCAACTGAATATCCTGTAGAATCTAACAAGGATTCTAC
TGAAAGTGAAAGTAAGAATGGAAATACTGAGAAAGTACAACTGTTACCTC
AGAAAACTATAAAAGAGCGAAACGAATGCATATATCCGGAGGAAAATCAA
CAAGATTTTGAAAATCAATCTATCAGCGTTGGGGACTCTAAAGCTACAGT
GAATAAACAATCAAAAGGTGTGTTTGATCGAATTAGGAGTGAGGATAAAT
CTTCCAAAACCGTTAACCAGGGGGTGGTCCCTTCAATAGAATCATCTTCT
AAAAGTGATACAAACTCTGATCGGATCAAGAGGAAAATTAGTAACAATCT
AATACGTATTGACGATAGTTGTAAGGAACTTCAGAACACAATTTTAAGTC
AAAATCAAGACATTATTTGTGAAAGTGAGGAGAAGAACGAATCTTTTGGG
CGAGATCAAATTAGCGGCGTTGGCGTAGAGACTACCCCTCACCAGGACGA
TAACCTTCAAAGCCAGTCAAAAGAGAAAACAAAACGTATCATGCTCAAAG
ATACTAGCCAGGATACTATAAAACCACCAGCGATTCAACTTCAAAATAGT
TTAGATTTTGAAGATATTCAACCTCGGAAAAGATGCAGCCCTACAATGGT
GTCGAAAGATAAACCAATGAAATTTTATTCAAGATACAGTAGTAGTCAGG
AAAGCCTGGGTTCTAGAAATTCATCCATGAGTAGTATTGGGTACGAAATT
AAACGAAACTCAAGTCCTGAGGTTTTATCCATTGAAAAGACTAGTAGCGG
ATCACCTCAATTCTTATCGAAGAGTATGACGAATTTGAGCTACCGTAAAA
TGCTCAGCGAGGATGAAAATCATCATTCGCGTAAAAGACTTTCCAACTTT
TTTTCATCCCGCAATAGCATTCACGAGGGTGACCATAACAATGGATTACG
TACTGAAAGTCATTGGCCTAAACCACGCACGCCATCCCTGTTTCGACGAT
TCAGTATGAAAACACCACAGAGCACAGAGCATGCGCAGAGCTATATAAAT
GTAATCGTGCCTGAGGTTAATATATTAGATGATTCCGAGAGTTCGACAAA
TAATGGCGGAAGAACTTCAGGGAAAGGTATATTTCGAAATCTTTCATTCC
GGTCGGCTACCAGATTGAATTTAGAAAATCTGCAAGAAGATGCAGTGCAT
TCGTTGAAGCCACCACCACCACAAGCGAAAAGTTTTCCTGGGTTAAAATC
ACCTTTCTCTCGCTCCAAGTTCGAACGCAATACGGCCGAAATGCGAAAGA
GAGTTTATGATGAAATGTTAAAGAGTATTCAAGATGGCGACTGCAAGAGA
TTGAAATTATTGTTAAAACGCCGGCGAACAGATATAAACACTTTGGAACA
TAACCATTCTTTGATTCATGAAGCAGCTTATAAGGGATGTATGAAATGCG
TGAAAGCTTTAATCAAGTCAGGCTGGTCTGTAAACTTATCTGACGAGGCA
GGTTGGAAACCAATACACTCAGCTGTTTTTGGGGAAGACTTAGAGACGGT
GAAATGTCTTTTACAGAAAGACGTCGATGTCAACATCATAACGATTGACG
GATACACGCCGTTACATTTCGCCATTTATAACGACGATTTATATACGACG
TATGAGTTGATTCAACATGGCGCTGATCCACAGTTTCAAAGTAAACATGA
AATCGCAACTCCATTCCAATTGGCTATCAACCTTAAAAGGACTACTATAC
TAGACTATTTGTTGATGTTGGCTTGCTTTCGAAGTGTATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000094_pilon | genome | sc0000094_pilon:1233529..1235973 - |
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