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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:782707..785825+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1249.1.p1 ID=MSTRG.1249.1.p1|Name=MSTRG.1249.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3119bp|location=Sequence derived from alignment at sc0000006_pilon:782707..785825+ (Clytia hemisphaerica_ch_hm2_pilon)
CTGGACCTGTACAGTaccttttcaatttttgaatagcAAGAATGAGGTTT
TGGTGTTTTCTTTAAATGAATATATGTTTTCGTGTGCAACTTTTCTATTC
TCGTATCAAAACGTTAACAAGACAAGATGAGAATTTTGACTACCACAACA
TCATGGtgagaaattttattctttCTAGATAAATATCTGTCTCGTATAAC
TTATGGCGTTCAAAAATACCACAAACTTGGCGCAGAGAATATGGGGCTTA
TAGATTTTAGAATTCGCCTTAAGTTTAATGGTTGcattaattttcgcgtg
gattaattttcgcgaatcaagaagGGTTTTCaagagttttctatattttt
ctcGCCTAAAGGGTTggaaaatatgacgaaaaatctgaactcgaaaaatg
tATCCAATATTGTACTCGGTACCgtgtgataactattacatacatcTACA
CATTCGTTGTTATAACCATGAACTTGATATTACTtatgtttttctcaaaa
atctaatGCGTAATGGTGACAATTGATGTATGAtttttttCGGCCATGGC
TGTCGGGAAATTTATATTCTAGGGCTAAAGCTACTTTTATAACACGACAA
CACTTTTACTCCAgtgagtttttttataagaacatccaaaactttttaag
ccttcggatattgTTAGCTTCACCAATTaaaaaaaGTCATAGCCATTAAA
GCCTCTTATAttctattttcttataaaaaacatgtcctaAAACTGTCCTT
TTCTAGGCAAGGTCAGGTTCTAAGCCCTCCATCACAGCCAAATGCAGCAG
CTTTTAAACCACAAGTACAGGTTAATGCCCCTTATAACCAGCAATATCAA
CAACACCCTGCATTCCACCCACAAGTACCTGTGAATCCTGTATTCAACCC
GCAATTACAGGTCGCTTATCCACAAACACCGGTAACTCCTCTGGTACATT
CAACATAAATGTCTGTGGGCTTCCATCACCAGGCTCCAGGTATACACCCA
TCAACAAATGATAGTAGCGCAACCAGGACAAATGGTTGTAACACAGCCAG
TGGTGCACCAACAACCAATCGTTATCCAGCCACCACATCACCAAGTGCCG
CCACAATTCCAACTACAACCACCACAAGTTTTCCACCATCAGCAACCACA
AGCTTTTCATCAACAAATACATCCACTACACCATCAACAACTAAATACCC
AACACCCAAAACCGCTTCCACCAACACGCCCTACACAACCGAAGCGGAAA
AGTTCGGTCGCCGGTGGATTGCGAAAAGCAGGTAAAAATCATTCATTTCT
CGGTGACGGATACAGTTCgacaaagttgaaaaaaaatcttcgtcaaatac
agtggagtctccataacttgaacccGCACGGGGACCCAAATTTGTTCAAG
tcaaggaaattttgagttacgGAGTAAGGTTAACACCGCCTCAAGACCCA
CTGGGAAGGGGTTTAAGTGTTATGTGGGAAGGGattgaaaaaatggccaa
aacatTGTCCCCAGTAAAAggttatactccaatttttgtcccgcctGAAG
ATAAtcaaatagaaaccaatcctcactgaaaaatatttcttccaacccca
ctgaattttttgactttaaaaacaaaataattgaaatttccattcataaa
aaatatgtgaACATCAATACCTATCGAGTTTCATCAGTCCGtttttttta
tccccattggctgaaaaaataccgagtctgtgagaagggtgtgaTGGTTT
ATGAGCCATCGTTAATTGAAGGGACAAGAAGAGACTCGTTCGAGTCACCA
TCCCTGCTGGAAAAATACATataatgatattttttctttttcaatttaaa
aaatttagtgaAAGTTGTAAAAGCAGCGAACATGGCAAATAGGGCTTTTA
ACGCATTTGGTGGATCTTCGGATGGAAATGAAGGTCTTGGTGGATTTTTT
GAAGGAGGTGAAGCATTTGATTGCAGCGCTGGTTTTGAGCCATCCTTTGA
TATGGTTGATGGTTTTGGATCATCCTTGGATGTCATGGGCTCTTTAGATT
TGGAGAATTTTGAGAGTCAATTAGAAAAGGGATTATctcatctttaattt
ttttcgtgTATGTATGATTAACCCTCTTCATTCTGGAAAAAATATTCTCT
ACAACTTCCGAACAAATGCTACGAAAAGCTAGACGAAGCAAATTCCGAgg
ggggggggGGTCTATACTAGGTTTGCTAGTTCACGGATATTTTTGAGCGA
AAGTTCGCAAATTTATCGACTGAATTTCATATAATTTGTCCCTTTTGACG
TTTTACGACCCTGTGAGAGTCTATTTTCTTAGTTGCTGTTTTAGGATGTT
TTTTACGTCTCATTATTCCCGTTACGAAtttttttATACCTTCATATCGA
AATCAAAGTAAAGAAAATCGTGGTGAAAATACTAAAAGGGATGATAGGGA
TAAACATAGAAATGTTTTGAACTTGATGTACTTATCGGATTCTTCTGTAT
AAAGGGAAATTATCACGTCGTGGTATGGTGCAGCCAAGCCCTTAGGTttc
ctttttatataaattttcatttcttagtCATTATTGCTCACTTTGTAAGC
TCATTtggggttccttcctcctggcggtatgatctggtggtccttttgca
gGAGGATAGGAACCTTTagatttgtactatttgttcgtgttactatacta
tagataaaaaaaaaaaaaaagccctTAGGTGAAGTTATTCACTCTTAGGT
GCAAAATAAACGCCCcccactttttaatttttcgaaaattttcaaaccaa
tttttaagaatattttcagttagaAAGAAGAAGTCGCCTAATTTTGGTCC
AAAAAGCCTTATTTTAGTCTATATTTACCtattatttttgggttttcaga
agtacaatctccaaccccccccccgccgaTTAGattccccccgtttatta
aaatttcgaaaattttccaacggtcaaaaaggtgtatagtACTGTCAATT
TATATAGTTTTTGCAATGTTGTATTttcttctcgtttgtttgacaacttt
attttgaaataatctcTGTATTTTAATATCGGTACAATCATGgacgaaat
atattgagattcgagtgta Coding sequence (CDS) from alignment at sc0000006_pilon:782707..785825+ >MSTRG.1249.1.p1 ID=MSTRG.1249.1.p1|Name=MSTRG.1249.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1026bp|location=Sequence derived from alignment at sc0000006_pilon:782707..785825+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATAGTAGCGCAACCAGGACAAATGGTTGTAACACAGCCAGTGGTGCA
CCAACAACCAATCGTTATCCAGCCACCACATCACCAAGTGCCGCCACAAT
TCCAACTACAACCACCACAAGTTTTCCACCATCAGCAACCACAAGCTTTT
CATCAACAAATACATCCACTACACCATCAACAACTAAATACCCAACACCC
AAAACCGCTTCCACCAACACGCCCTACACAACCGAAGCGGAAAAGTTCGG
TCGCCGGTGGATTGCGAAAAGCAGtgaAAGTTGTAAAAGCAGCGAACATG
GCAAATAGGGCTTTTAACGCATTTGGTGGATCTTCGGATGGAAATGAAGG
TCTTGGTGGATTTTTTGAAGGAGGTGAAGCATTTGATTGCAGCGCTGGTT
TTGAGCCATCCTTTGATATGGTTGATGGTTTTGGATCATCCTTGGATGTC
ATGGGCTCTTTAGATTTGGAGAATTTTGAGAGTCAATTAGAAAAGGGATT
ATctcatctttaaATGATAGTAGCGCAACCAGGACAAATGGTTGTAACAC
AGCCAGTGGTGCACCAACAACCAATCGTTATCCAGCCACCACATCACCAA
GTGCCGCCACAATTCCAACTACAACCACCACAAGTTTTCCACCATCAGCA
ACCACAAGCTTTTCATCAACAAATACATCCACTACACCATCAACAACTAA
ATACCCAACACCCAAAACCGCTTCCACCAACACGCCCTACACAACCGAAG
CGGAAAAGTTCGGTCGCCGGTGGATTGCGAAAAGCAGtgaAAGTTGTAAA
AGCAGCGAACATGGCAAATAGGGCTTTTAACGCATTTGGTGGATCTTCGG
ATGGAAATGAAGGTCTTGGTGGATTTTTTGAAGGAGGTGAAGCATTTGAT
TGCAGCGCTGGTTTTGAGCCATCCTTTGATATGGTTGATGGTTTTGGATC
ATCCTTGGATGTCATGGGCTCTTTAGATTTGGAGAATTTTGAGAGTCAAT
TAGAAAAGGGATTATctcatctttaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:782707..785825 + |
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