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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000094_pilon:640930..646344+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12470.1.p2 ID=MSTRG.12470.1.p2|Name=MSTRG.12470.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5415bp|location=Sequence derived from alignment at sc0000094_pilon:640930..646344+ (Clytia hemisphaerica_ch_hm2_pilon)
atttttgaattAGGATTAGGGCCAGGAGATCATTCCACAAAGATGGAATT
TCTGATCGTCAAAGGACTCTCTTGTCCCATAATTTTGGGGAATGATTTTT
TACGCCGATATGGCGCTATAATAAATTACGATTTGAACAGTTTGGAGATC
TCGAAACATGCGAAAAACGATGACGAACAGGAACTTAAGATTAGTAAAAT
AACTTTTGAGTCAAATCCGGCCATGACACcgaaaaaaaccaaaaactgTG
AATCATGAAGATTACGTTGAAGATCAAGTGAAGAATGTTAATGTCCCAGA
GgacatgaaaaataatttccgaagatttttatttaaatactCGTCAGTTT
TTTGTCATGACCCGGATAGCCTAACACCAGCCAATGTAGAGCCGTTTGAG
ATAAAACTTAAGGACAAATCTCCTATCCAGTTGCGAGCGTATAAGGCTTC
ACCAAAAGTGAAAGGAGTGATCGAGGATCACATTGACAACCTTTTGAGAA
CCGGGGTCATCGAACCCTCCCGGTCAGATTTCAGTTCTCCAGTAGTTATT
ACTCCAAAAAAGGGTGGCACCTTTCGCTTTTGCGTGGACtatagaaaatt
gaataaacAGATAGTAACGGAGGCCTACCCCCTGCCATTGATCGAAGACA
ATTTAGCCGATTTTAACGGTTCCCTGTTTTTTACGATAATTGACATGAGA
TCGGGTTACCATCAAGTCCCTTTGGAGAAAAACTCACGAGCATGCACGGC
TTTCATTTGCCATATCGGGTCGTTTCAGTTTAGAACGACCCCTTTTGGTC
TCGTGCACGCTCCTGCAGGTTTTCAGAGAAGAATTATGAAAGCTTTTGGC
CAACCCCTACCCGAGTTTGTGAAGATTTACTTGGACGACATCGTCGTCAA
ATCGAAATCCGCCCATGAACACCTAACCCACCTTGAACTTGTTTTTAATG
TCCTAGCTCATAAGAACCTCCAAATTAAACCAACCAAGTGTGAATTTTTC
CAGACCTCCATTACATATTTAGGCCACGTAGTCTCACGCAAAAGGTATTG
AGACTGATCCTGATAAGGTCAAAGCGATTCGCGATTTTCCAACACCTACT
TCAACAAAGCAGGTAAGGAGTTTTGTTGGTCTAGCCACATATTACAAAAA
ATTTATAgttaacttttcgaatttaaccCGGCCGTTACATGCTCTTACTG
GTGCGAATGTACGTTTCGTATGGAATGAAGCAGCTGAAACaagttttaaa
atcttaaaggaGAAGTTGACTAGTACCCCTGTTCTAGCGCATCCTGACTT
TTCACTTCCTTTTATCATCCATACAGATGCCTCTGACACAGCAGTGGGAG
CAACCCTATCTCAGGAGATAGATGGCGTCGAAAGACCTATCTCGTTTCAA
GGGAGAGCACTTACAGGTGCAGAAACGAGATATAGCGTAACTGAAAAAGA
GTTCCTAGGCATAATCTTCGCTTTAAAGAAATATCGTCCGTTCGTATTTG
GATCAAAATTTACGGTGGTCACCGACCACCAGCCAATCGTAGCACTAGTC
AGATCACCGAACCCAAGCAATAGGGTCGCGCGGTGGATCATGACTCTCCA
AGAGTTCGAATTATCATTAGTTTACCGCCCGGGTAAACTAAACGCAAACG
CAGATGCTCTCAGCAGAAGAGAGTATCACACATTGAATATGCTTACAACG
GTGTCTCAGAATGAGATCGCACAGTTGCAGAGACAGGACATACAACTGGC
CGATCTCATTAGATATATAGAATGTAAGACGATCCCCGAGGATGAAAAGT
CGGCGAAGAGTGTTATATTACTTTCCGACCAATTCTTTCTCAGCGGGGAA
GGGGTCTTATTTAAAATGGGTATCCCAAGGGTGGACAAATCAAAACTTGT
AGTCCCCTCTCAGCTGAAAGAGGAAGTTCTGATTTGGTCCCATGATACCT
CACATTTTGGGGTCAATAAAACGTTTGATCGAATCCGATCGAAATATTAT
TGGCAAGGATTCTATAAAGAAATTCAGAATTGGGTCTTGAGCTGTGAGGG
TTGCAACAGAAAAAAGAATCCCAAGAAGAGTAACCTTCAACTCATGACCA
TCCCCTGTTCGGAACCACTGTCGGCGTGGGCCATCGATGTTTTGGGTCCC
TTCAAGCGCACAGTCAGGGAAAACAGATATATAGTAGTATTCACAGAAAC
GTATATACAAAGTGGCCAGAGGCCGTCGCGACTAGTCACACCAGAGCTCC
TCTAATAGCGGAAATAATATTAGAGCGCATCGTTTATAGGTTTGGCGCCC
CGAGGCAGCTTCTTTCGGATCGCGGAAAGAATTTCCTGGCAAGGCTCGTT
GCCGAACTCAGCACTGCTTTGCGAATTAAGAGGGTTCATACCACAGCATA
TCACCCACCCAGCGACAAACGGACTCGTAGAGCGGTATAATGGAACTTTA
GCACGTACACTCGCCCAGTTCACTGACGCATTTCAGGACGACTGGGATAC
CCACATTAACTCTGCCCTATTTGCTTATAGAGTTAcccccccATTCCACT
ACCAGAGAAACTCCCTTTTTCTTACTCCACGGCCGCGACCCCAGAATGCC
CCTAGACGTAGCACTTATACCACCAACTGAATTAGAGGGAGAGTTAGCCG
AACAGAAAGAACAGCTGATAACCTCCCTTCGTTTGGCCCAAGAGACCGCG
AAAGAAAATATGCAACGATCCCAGCAAGCGaacgaagaaagGAAAACACC
AGTGGACGCGCCTTTTTTTGTAGGAGACTTGGTATGGCTACACGTGCCGG
ACTCTATCAAGGGCCTTTCTAATAAACTAAGATTCCGTTGGCATGGACCA
TATCGTATTGTTGAGCAAATTTCGCCTGTCAATTTTAAACTCGAGATAGA
GGGGAGGAGAGTCCCAGTAAATGTCCATGCCTCCAGAATAAAGAAGTACA
CCCCCAGGGAAAGACCGGACAATGAGGTCGAAGGAGAGGACGAATTTTGT
GACGTCCCGTTAGATTGCATCCCCTTAGATTCTATGCCGCACGTCCCAGA
TCCGACAGTGGAAATCGAACAGGAAGACCTGGTTTATAGGGTGGAAAGAA
TTCTGAAATCCAGAAAACGATCTGGAATCACGAGTTATCTTGTGAAGTGG
CAAGGATATCCCTTGTCGCAGGCTACTTGGGAGCCtagtgaaaatatttt
agacCCAAACCTCATTGTAGACTTCAATCgcagaacaaaacaaaagaaag
ctaataaggccaaagctaaggaaaagaaagaaggagaaaataaaagaact
cgaaaagaaagCCTGAACATGATCGTCGTTAAGGAACCAGAGAACGAGAA
CCATTCTAACTTCTCAATTTCTAACTCTATCATCACGGTCTTAATTTTTA
TAATGCTGTTCACGTTGGGGTCTGCAACGAGGTTGGGGCCCAGAGAATTA
GGTGATTTATATGACTGCACCACACTCCAACGAAGATGGACATTAGTCGT
TGCCTTCGTTTCGTCGGTTACctgaacaataaaagaaaaacaacataaGA
AAATACAGAACAATCATTGTCTATGAATGTATTAATAATCACAATTACTT
GCAGTTTTCGAAGCACAAAGGTAGACCTACAGAAGGGACACAGAGGTGTA
AGTATGGTTATGTCTTTAatctaatttgaatttttttgagttttttaatt
ttgcgtTAGATAGTCGTAATACGGACACGCACCCTCAGCCTTCACACGCC
ATGTGTTCTTATCccaaagagaatttttttattAgaattgagaaattttg
cactagtgctagaaatatttttgagacttaaaaattcgatttttttccta
CGCGTCTAATAGGAAACGAGGGTACAATCGGGACAGGAACACAGGCACTA
GGtaatagatttttttatataacggcattttgaattattttatatacGTA
GGCAGTAACTGAGAGAGACCTATTTTGTGGGAAGTTTTTGTGTGCCTCCG
AAACATCGAAAATCTTACCTTGAGGTGAAAATTCCAAGTGTGAAACTCGT
CATCGATTTAAAAATTGGTgtgcctgaaaaaaaataaataaaataatgag
ATAGGTTCTACATAAATAGAATAAAGCCTGACTGGAAATTCACAGACGAG
CGATAGCTATGAGACACGTACTTTTTCTATCAGCCTCGACTAGATCTCAC
CTAGAGGGGGGAGGGAAGTCTATTGATATAGGTAAAAAGGAGGAGGGCCG
TGAAAGTAATTGAAATAGTGTGGAAATGGAGTTGGATGCCAGGCTGGGAA
ACAGAAATACCAAAGCGAAGACTAAACCTTAAACCAACCCAGAAGGACCG
ACGATGGACGAAACCCCTGAAAGAAGAGAGAGGAAAAGAAACCACTTACC
GGAAGACAATAGCAGCAGACGATATCTTCGTGGCCGCGCCAAACTCGGCC
ACAACACCTGGTGGCCAAGACTGAACCATTTCTATCCTCGAAGTGCTTTG
GGTGCAAACACCCGGGGCACATTGCGATGTTTGTAGAGTGACAATTGACG
CATTGCCATACGGCGTTCCAACGCCCGTTCACTGGAACTAAGGTTACTGT
GCACAGTCGATCCATCTTCACGGGTATCCAAGAAATAATGAAAGAATATA
ACTGCTAAAAGAAACTATACTCTCCGTACAGCCACAACGATTGGTTGAAA
GCAATCTACCAATCAAATACCACCAAGTACCCATTACAAGTAATGCCGAA
CAACACAACAACAATGATATGTTTTCAGTAACAATGAATAAGTTTCCCGC
GGGACAGTCTCTGTGCAGTCACCACGATTGGTTGAAAAGAACCTACCAAT
CAGATACCACCAAGcaacatttaaaaataataccgaacaacacaacaaaa
tgaactattttgaaaacaaaaaacgaagAACTTTCCCACGAGAAAACAAC
AGTTGCTACCATGGTTTCCACCCTCCCTTCCAATCAACCATCACCATAGA
CAACAGACAATTTCTATCCTAGCCTTGGCACAAAGAGAGACACTATTCTG
GGGTCATTTAGACCCCGTAGAGTAGAAATGATATGGTTCATGTTATGTTG
ATTGGGAAATGTCCACCCTCCTCCCTTATTATACCTCATATTACTTAGGT
CATAAGATAAATatgttcttgaaaaaaattattatttaaacagttaactt
tatattttgtgGATTATAGGAAtagtatttatcattagagtttagattat
ttaatgtttattttcatagtatttttaggattattatataggatttgcta
ttGTACTGGTTCAGTCGGAAACGCCCTGGTCATCCCAGGTATTTATTTGA
ATTGTAGTAGGGGAAACCGCTCCCAACCTGTTTAACAGGGCGGGGAGGGG
TGTACAGAGGCGATT Coding sequence (CDS) from alignment at sc0000094_pilon:640930..646344+ >MSTRG.12470.1.p2 ID=MSTRG.12470.1.p2|Name=MSTRG.12470.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=747bp|location=Sequence derived from alignment at sc0000094_pilon:640930..646344+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaaaataatttccgaagatttttatttaaatactCGTCAGTTTTTTG
TCATGACCCGGATAGCCTAACACCAGCCAATGTAGAGCCGTTTGAGATAA
AACTTAAGGACAAATCTCCTATCCAGTTGCGAGCGTATAAGGCTTCACCA
AAAGTGAAAGGAGTGATCGAGGATCACATTGACAACCTTTTGAGAACCGG
GGTCATCGAACCCTCCCGGTCAGATTTCAGTTCTCCAGTAGTTATTACTC
CAAAAAAGGGTGGCACCTTTCGCTTTTGCGTGGACtatagaaaattgaat
aaacAGATAGTAACGGAGGCCTACCCCCTGCCATTGATCGAAGACAATTT
AGCCGATTTTAACGGTTCCCTGTTTTTTACGATAATTGACATGAGATCGG
GTTACCATCAAGTCCCTTTGGAGAAAAACTCACGAGCATGCACGGCTTTC
ATTTGCCATATCGGGTCGTTTCAGTTTAGAACGACCCCTTTTGGTCTCGT
GCACGCTCCTGCAGGTTTTCAGAGAAGAATTATGAAAGCTTTTGGCCAAC
CCCTACCCGAGTTTGTGAAGATTTACTTGGACGACATCGTCGTCAAATCG
AAATCCGCCCATGAACACCTAACCCACCTTGAACTTGTTTTTAATGTCCT
AGCTCATAAGAACCTCCAAATTAAACCAACCAAGTGTGAATTTTTCCAGA
CCTCCATTACATATTTAGGCCACGTAGTCTCACGCAAAAGGTATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000094_pilon | genome | sc0000094_pilon:640930..646344 + |
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