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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000094_pilon:626351..631852- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12469.1.p3 ID=MSTRG.12469.1.p3|Name=MSTRG.12469.1.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5502bp|location=Sequence derived from alignment at sc0000094_pilon:626351..631852- (Clytia hemisphaerica_ch_hm2_pilon)
AGAAAATAAAAACTTGTTGAAAAAAAAGACAGAACATTATATTACTGAAT
GGTTCTTGATTGTTGAGAACTTCGGTTAAGTGCTTGTGGTTTGCTGGAAC
TTGAAATTACCAATTTAATATTATAGTTTTGAACTACGAATATATTACGA
ACGTATAAACATAAAACCTACCTTCAAAATGGTCATCCAACCAGATATCC
CTAACCAAGATCTTACAGATTGTGAGTATCGCCGTAAAGAGACTCAAATC
CGTCAACAATTATTGGCAAACTTTTTACAAGCTATGCGTGAGGATTTAGC
AGAATGGATCTCCAGTTTATCTGTTCGGTCAATTACACAAGAGAACTTTT
TATCTTCCCTCGAGAACGGTGTTATTTTGTGCCAACAAGCTCGTTTGATT
CAACGCTACGCTGAGGAATATAGCATCATCAATAAACCACACAATATGAA
GATTCCGAACAGGGAAGTAACTTATACAGAAAAAGGTGCATTTAGAGGAT
CATTTATCTCAAGAGACAATGTCGCTAATTTTATCCAATGGTGTCGAGGG
CTTGGTATTCCAGACGTTTGTTTATTTGAAAGTGAAGATTTAGTTTTACA
TAAGAATGAGAAATCGGTCATTTTGACCTTATTGGACGTAGCTAGAAAAG
CATTTGTGTTTGGTGTTCAACCACCGGAGATTGTACGTTTTGAACAGGAG
ATAGATCAAGAGATAGAAGAGGATAAACAAAATGAAAAGAAAGGGAAACC
TCCACCAAAACCTATTGATTTGGAAGAAGACAATAACCTGGACACACTGG
TGAGTTGGTTGTCACCTTTTTGAGTGATTTTAGCACCCCTGTCTCAGCGA
CCCATTGAAAATCTTTCACAATAAGGAAAATAATTCTGTGTAGTTTTTAG
AATTCATGGTATTTTCGTACCAAGAACGAGCATTAGCAAATGCTACTGGG
CCTGTGACACGGGGGTGTATTCTAAAATCAGAGCCTCTTTTTGTAAGCTA
GCCCTAACCAGTTTGTAAGATAAAAGTCAGAATACAAGAAGATACTTCTC
TTTGAATTACATCTCTAATAGACCTCATCAATCACATCTTCTGAATGTAT
AATTTTACGAATAAACTAATTCAAATCCATAATGCTTAGTAGTGCTACGA
CTTCAACCTCAATTTTTTATCTTAAGGTTCGCAATATCGTCAATCGTTGC
ACTTGTTATGATCGATTTCCAATCAAGAAGTTGTCAGAAGGAAAATATCA
ATTCGGTGAACAAAAGACACTCATCTTTGTCAGGGTAAGATTTCTTTTTA
GATTAAAAAACATTGGGCAGATCTAAGCTACACTGGCATCCACTAACGGA
TTCGTGCTCCTTATAGATACTTCATGGGGTTTTAGTAGAGGTCTGCGATT
CGGACTAGAACAGGTCGTCTTTGTTGTTATGGCTATGGCAAAGCGTGCTT
CAAAGTAGACAATCTTGCCAATACATCCATGTACCAAATAAACAAAGATC
AGTTGATTTAGAGGATGCGGCGTAGAGCCTACAAATTGCATATTTAACAT
TATTTTGTAGTCCAAACGAGACACTCAAACCTTTGCTGCAAACTACGAAT
AAACTCTTACCGTAAGTTGGTATAATGTCGACATCCCTCATGTAACTCCG
ATATCCTTCTTAGAGATAGGATTAAAAGGAAGGTCGGAATCACTGATTGA
AAAAAAGATGTCTGACTGTTTATTAGCGATCATCGATTTCGACCTTTTAT
TATACCTAGGTTTAAAAAAGGGTGTATCAGAATTAGATATGGGGGGCCGA
TATGGGATGTCGACATTAGACCAACTTATGCTAGTCAAATTTCATCTATG
ATATACTATCGGTTAACATCCCTAATACCAATCTCTGTCTCCCCTAACAG
GTCATGCGTAAGCACGTGATGGTTCGTATTGGAGGAGGCTGGGATACATT
TGAACATTACATCACGAAACACGACCCTTGTAGGACCACTGTCGCAGGTT
AGTACTCTTCGACTTTATGATAGTTTAGTACATGAAAAAAATTACTTTGT
TAGAGTAAGTCTCGTATCAATTTTTAAAACTCTCATTCTCGTCATCATGC
TGTAAGCTTAGTTTTCTTTTGTTTAACTGATAGGTTTCTTTTGCAATGTT
TTCTGACATTACATCACGGACCCAACAGCTGATTGGTTGTAAATGACGTA
AAATCAGTCAATACGTCACTTACAACCAATCAATTTTTGGATCCGTGGAA
GACATTGTAATTGTGCATATCATGATTGGGTCCTAATGGACACCTTTTGC
GAATAGTTATCAGACTTCACGTCAGCCGCATCCACCTTTTAGAATGATAG
CTAATAGGTTCTTAACCTTTCTTACAGGTTCAATCGACAACAATGGTCAA
AGCAGACAAACACAGCCACCCGCTCGATGCACTAACCTTCTTAACAACAG
TAGTAGCGGTGTAAGTCCCCGACGTAAGAAGAGTGTACCGGACAAACGGG
AGACACACCGAACACACGAATGTATGATCAGTACAACATCATCAGATACC
TGGAGCATGTGTTCGGGAAGTAGTGAAGGATCAGGAAGCACGGATGTAAG
TTGTTGATGGTTTTTACTAAGCAGTCCTCTCTTTTCTAGGCGTTTCCCCA
ATTTTTAGTGGTTCCTTTTTCGCTTTTGTTCACTCATTTCACAGAAAACA
GTTTTAAAATTTCTTCATTCCATATTTTCTTTTATCCACTGTCACGGTGT
TACAGTTCTTTATCACTCCTAAAAGCCAAGCTATTGTGTTGGTTGAAATG
ACATCAACCAGTAATGAGTGCAAGTGAATGATTTCATTTCTATTCAAACA
GCACTGGTGTTAATCTTTAAATTTAAGTTATTAGTAAAATGTGACCTTGA
CTTTTCTATGTAATCTCTGGAATGTTTTTCTTGTTTTTATTCAGGGTCGT
CCAAAACCATTTGGATCTCGCAAAGAATCAATGATGAGTACCAGTAGCAC
AGAAACACCAGATACCTCTCTACATTTCACCAAGTCCATCGAAGAAATTG
ACCGAAGGTTACAAAGTATGGAAGACCGCAAACCGACCCTGGATATGACC
ATTAAGGACCCTTCTGTGTACGAGCATAGAGCTGACAGTTGGTTACGGCA
TCATTTAAATTCACTTAAACAGAATCGAAGGGCGAGTGACGCGGAGAATC
TACAGCCTATGGACGCTTATCAAATGAAAAGAGGCTACACTGCTGACGTC
ATCGAACGACGACCGAAAGCGCAGAAAGAGAACACGAGGACACCCAAAAT
GGAACGAAGAAGTGAGTTTTTGTTTTTTTTGTTTTTTTTCTTTTTCAGTT
TTTTGTTGAGAATGTCCTTGTTGCATCAATAACCTCTTATATCGTTTCAT
CTCTTCCCTTTTTCTCGACGTTCTTTTCTTAAACTTTTTATTAACACATT
CCTTACTTTAAAACCTCATCAATTGGATTTTGCCAAGCTTAAAGAAACCT
ATATCGGTTGACGCGTTTATGGAGTGACTTCAAACTGATCGTGGTAAATT
TGAGTCTTCTTTATTGAAGTTTGATTAATTAGATTGGTTTTGATTATATC
TTTGCTTAATTCAATTTACGCGTGTTCTTTTTAGACCGAGCTGGTCAAGT
CCGTGCAAGGTCCGCTACCGGTACCAACACTCCTATTTCTAAATCCATCG
ATCAGGGGTTGAATCACGATCGGATTTCCGCATACTCTCCCGCTTCAAAC
CCAACGCCGGACGGCTTCTTTTCATCGGATACCCTCTCTGTTTCATCATC
TATGAACTCTTTACAATCACTCGACAGTCATCGCAAATCGTGCTCCGAAA
TCGCGACTCAAACTGACGACCTTCTCTTATCACCCGACGGCTCTATTCCG
TCAAATATTCCAGGTCCGCTACGTAAGAAATTAGCAACGGTTTTAGGATC
GCCGTCGAAAATTCCACGTCCCGTTATGCAACGTTCAAAAACTATGGAAC
TCCCATCAGCGAAACTCAAGCGAAGAAACTCAACTAATTCACATGACCGC
GAACGATCGAGTCAAAGAGCTCCTAGAATGCAACGAGAGAAATCACAACC
CAACTTTCGAAGAGAGAAATCGGATGTAGGACAATCATCGAAATATAAAA
TGGTACAATCACCTGGACCCAGACGAAGAGGTGAGTGAAGAGCTTTTTCC
CTTATATTTTTTCTATCTTTAACCAAACATCCTGTACCTGACGCAGTAGC
GTAGACAGGAGGGGCGCAAAATTTGTGGAGGAGAGCAGATTTTTATGACA
CTGTAATTATCTATTTATAATATAAAAAGATAATTACCGTGTCATAAAAA
TCTGCTCTCCTACACAAATTTTGCGCCCCTCCTGTCTACGCTACTGTGAC
GCGCAATGAAGTTTAAAAAAACTAGCTTGGTGACACAATGGAACCATTTT
AAAATTGTATTTTCTTATTCTATCTAAAAATTGCTCTAACTTTCTGAGTA
GGTATTGGATAGTATGATCAAGTAAGGCGTGAAGCATTTAATCTCCTTCT
TAACCTCTAATCAATAATATTTTTTCACCTTTTAGAAAGTATGAAGAAAG
AGAAACCAGTTCGTGTTCGAAATGGCCCGGTTCTCACCACCCAAGTATGA
TGATAGAAGGAGCAAGTGGCTGTTTGAAAGGGATTGAGTCGAATTTCATG
TTGGTGGAGTTAGAAGGCTCTTTTACCGTTACAACAATGCTAACGAGCTC
TAGACGATGCACTCTAGACAATAACTCTTGGTGGAAGAATTCAATTTCCA
TCGGAGATCATGACAAAGTCTCAAAATCAAATCATTCTGGAAAACCTCAG
AGAGTGAGGTCGTCTAAGAAGAAAGTAAAGGCAAGAGATATGAGTGAAAT
GTACGCATGTTTGGAGAAATACTTTTGCGTCCAGTATTTAAGCTGGTGTA
TACGGCTGTTATGAGCGAATCTACGACATATAACGTCATATTTTGGATTG
GAATGCCTCTTATATGGAACTTGATTGAAAATATCATAGGCATGAGATAG
TGAACATAATTTACCGACCCCTTACGCGTCAAGAAGACCGACTTGAATGG
ATCGAATGACGTCATATCTCGGTATCAGCTAGGAAGTAGATGCGCAAACT
TTACACATTCTTAACTGGACCCTAATTATCTCAAACTAAAACCCCTTTCG
GTGCGACAAGGACCAGAAAGTGTATTAAAATGTGATTAATGCATGGTGAA
AAACGTCCAATTGTATGTATAAAATTATACTAAAATTTATTCAGTATTTT
TTATTTTTCCATGCGCGACTCTCGTTATTATTATAAAATGATATATTTAA
AAATTATTCTTTTAGTTTTAGCGTATTGTTATTTTTTTGACTGAAAATGT
TCTCATGTAAATAGTTTTAGCCGTAGAAGATGAGATTGTATGTCAAACAA
ATTATTCAAGTAAAATAGTAAGTAATAATAAGGAAAAAAAGTGAAAAACA
AA Coding sequence (CDS) from alignment at sc0000094_pilon:626351..631852- >MSTRG.12469.1.p3 ID=MSTRG.12469.1.p3|Name=MSTRG.12469.1.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=318bp|location=Sequence derived from alignment at sc0000094_pilon:626351..631852- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGATAGAAGGAGCAAGTGGCTGTTTGAAAGGGATTGAGTCGAATTT
CATGTTGGTGGAGTTAGAAGGCTCTTTTACCGTTACAACAATGCTAACGA
GCTCTAGACGATGCACTCTAGACAATAACTCTTGGTGGAAGAATTCAATT
TCCATCGGAGATCATGACAAAGTCTCAAAATCAAATCATTCTGGAAAACC
TCAGAGAGTGAGGTCGTCTAAGAAGAAAGTAAAGGCAAGAGATATGAGTG
AAATGTACGCATGTTTGGAGAAATACTTTTGCGTCCAGTATTTAAGCTGG
TGTATACGGCTGTTATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000094_pilon | genome | sc0000094_pilon:626351..631852 - |
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