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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000094_pilon:600991..603214+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12466.1.p1 ID=MSTRG.12466.1.p1|Name=MSTRG.12466.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2224bp|location=Sequence derived from alignment at sc0000094_pilon:600991..603214+ (Clytia hemisphaerica_ch_hm2_pilon)
cgaccaatcaaatcccaatcatttttgtttaaaacggAGCTTTCCATGAA
GAATAGCAGGATTCATTTTGCCACTCGGTACGACGCGAGCAGCACACAGA
TTTCACGATGATCAAGAAATCGcttcttcttatttttgtctTGGTGGCTT
TACATTGTAGACTGAGTCATGCAGAAGGAGATTATTCGGTTGTGGTATGT
TCATATCTATGCTATCATTCTTAAATTATTCTTTATACTCTGATACAGAT
AAAACAATTATCGtttattgttaaccggttactttttcaaagcgggctac
acggctttttgcgcaatgcaattggttctttttgcatgacgacgggccta
cactgccaagagttgcccgtcgttaggaaaattcattgtgaagtcacttt
ttcaaaggaaaatgaacaatgtgttgagatcatttctctcattttttgtt
tctgacgtcagaaaataaaacaatttttgatctctGTTCCcttgtttttt
tcgctttattttgctatttttcctggagaaagcgctaaaaatcaatcgaa
actgaaggaaacggttaacaaatacaataatgaccggtttttttcgggct
gtactgaaaatattgccctcggtcaacgcaacaacctcgcaagctcggtc
gttacttgacctcgggcaatatttctcagtacagccctcactaaccagtc
attattgtattagtacagccctcactaaccggtcattattgtattatagT
GTAGTAGCGGCCTAACTGTGCATATTTTAAAGtttgagtataattttcca
ctggggacgatataaaacacccaatttttaaataataccCAGAAAATGGT
Gacatttagaacattttaaaaacattttcaggctgaaaacttaagttaag
aatatccgaaggcttcaaaaatgtcgATGTTATCATAAAAAATAACGCGT
CTATCCCAAAGAGAGCCCTAAAAATACACACTCCACGTATCTTCAACACG
ATATGATAATTTCTTTTATTGGAGGGCATTTGAAAACTCTGGCTATAATT
CTTCTGGAAATTAGAAAAGTAGCAATACCAAGACAAAAAGTACTAACAAA
AAACTTTCTAACgcgcacaatttaggtatttttcttttgcctgaccaatt
ttgattttgattctcTGTTTTTCAGTCAAACCTTCGTAACCATTTGGTTG
GACATTGGAAAATGAACGAGGAACAAAGCAGCTATGTTGATGACGATTCT
GGTCACGAACTTCATGGCGTGGCCTACCGAACCTCTATCAGACGTGGTAA
ATTCACTCGAGCAAGATATTTTCCATCTTCCACCAGTAGCAACATCGTTG
TCCCAAAGAGATCACCAATGAATTTCGGACGAAAAAGCTTTTCATTTGCT
GGTTGGTTAAAAGCAGAAGATTACGCTTATCCACATACAGGATTTTCAGC
TCGCCAAGGATTTGGTTGTTATTTTGCACCAGGAAGACTAGGATTTACTC
CAGGGTGGGATATAGGTCATGGGCATTCGGCTAGTAATGATTATACTTAC
ATCTGTATACGAGACGAACATCAACAGTTTGTGCACCAACGTATTCGGCA
CAACGCTGGTTCCACTGGGGCCGCTCTTTTGAACAAGTGGACCCACTACG
CTGTTGTTTTCGACAGAGATGCTCAACGTGTCTATCTCTACATCAATGGG
AAGAAACAAGACGACTACGCTGACATATCCAAAGTCAAAGGTAGCATCGA
CAATAAAAAACCGTTGAACTTTGGTACGCTCTACGGCTGGAAAACTAAAG
GCACGATGGACGACTACAGGATGTACAACATTGCGTTGGATAACCAAGAA
GTTCAGGTCATCTATGAAGATCATAGAGTATAAATTTTAGTATGTGCatg
attttatttgttttgacccaaatgtattttttaacTTCTTACTgtataaa
aaatttcatttttctgttaaaaaatttgtgaagtaaaaatttgaaaattc
tgaactgaaaaataatttcttttgaaataaattaccaatttaatCGATGC
TCTCAAAAAAGTGCGTAATTCGACCAATGACCTCTAATAAAACCCTGAAC
AAAAACTATTCCGACGTCTTTGAAGGgagtttttctgaaagtggTATCCG
CAAAGAAGTGATCGTCAGTTAACGTTCAACGGAGCTTCATCACAAGTATT
CAAAGACTCGGGCAATTTAAGGCA Coding sequence (CDS) from alignment at sc0000094_pilon:600991..603214+ >MSTRG.12466.1.p1 ID=MSTRG.12466.1.p1|Name=MSTRG.12466.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1590bp|location=Sequence derived from alignment at sc0000094_pilon:600991..603214+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCAAGAAATCGcttcttcttatttttgtctTGGTGGCTTTACATTG
TAGACTGAGTCATGCAGAAGGAGATTATTCGGTTGTGTCAAACCTTCGTA
ACCATTTGGTTGGACATTGGAAAATGAACGAGGAACAAAGCAGCTATGTT
GATGACGATTCTGGTCACGAACTTCATGGCGTGGCCTACCGAACCTCTAT
CAGACGTGGTAAATTCACTCGAGCAAGATATTTTCCATCTTCCACCAGTA
GCAACATCGTTGTCCCAAAGAGATCACCAATGAATTTCGGACGAAAAAGC
TTTTCATTTGCTGGTTGGTTAAAAGCAGAAGATTACGCTTATCCACATAC
AGGATTTTCAGCTCGCCAAGGATTTGGTTGTTATTTTGCACCAGGAAGAC
TAGGATTTACTCCAGGGTGGGATATAGGTCATGGGCATTCGGCTAGTAAT
GATTATACTTACATCTGTATACGAGACGAACATCAACAGTTTGTGCACCA
ACGTATTCGGCACAACGCTGGTTCCACTGGGGCCGCTCTTTTGAACAAGT
GGACCCACTACGCTGTTGTTTTCGACAGAGATGCTCAACGTGTCTATCTC
TACATCAATGGGAAGAAACAAGACGACTACGCTGACATATCCAAAGTCAA
AGGTAGCATCGACAATAAAAAACCGTTGAACTTTGGTACGCTCTACGGCT
GGAAAACTAAAGGCACGATGGACGACTACAGGATGTACAACATTGCGTTG
GATAACCAAGAAGTTCAGGTCATCTATGAAGATCATAGAGTATAAATGAT
CAAGAAATCGcttcttcttatttttgtctTGGTGGCTTTACATTGTAGAC
TGAGTCATGCAGAAGGAGATTATTCGGTTGTGTCAAACCTTCGTAACCAT
TTGGTTGGACATTGGAAAATGAACGAGGAACAAAGCAGCTATGTTGATGA
CGATTCTGGTCACGAACTTCATGGCGTGGCCTACCGAACCTCTATCAGAC
GTGGTAAATTCACTCGAGCAAGATATTTTCCATCTTCCACCAGTAGCAAC
ATCGTTGTCCCAAAGAGATCACCAATGAATTTCGGACGAAAAAGCTTTTC
ATTTGCTGGTTGGTTAAAAGCAGAAGATTACGCTTATCCACATACAGGAT
TTTCAGCTCGCCAAGGATTTGGTTGTTATTTTGCACCAGGAAGACTAGGA
TTTACTCCAGGGTGGGATATAGGTCATGGGCATTCGGCTAGTAATGATTA
TACTTACATCTGTATACGAGACGAACATCAACAGTTTGTGCACCAACGTA
TTCGGCACAACGCTGGTTCCACTGGGGCCGCTCTTTTGAACAAGTGGACC
CACTACGCTGTTGTTTTCGACAGAGATGCTCAACGTGTCTATCTCTACAT
CAATGGGAAGAAACAAGACGACTACGCTGACATATCCAAAGTCAAAGGTA
GCATCGACAATAAAAAACCGTTGAACTTTGGTACGCTCTACGGCTGGAAA
ACTAAAGGCACGATGGACGACTACAGGATGTACAACATTGCGTTGGATAA
CCAAGAAGTTCAGGTCATCTATGAAGATCATAGAGTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000094_pilon | genome | sc0000094_pilon:600991..603214 + |
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