MSTRG.12460.1.p1 (mRNA) -

Overview
NameMSTRG.12460.1.p1
Unique NameMSTRG.12460.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000094_pilon:535226..535964+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12460.1.p1 ID=MSTRG.12460.1.p1|Name=MSTRG.12460.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=739bp|location=Sequence derived from alignment at sc0000094_pilon:535226..535964+ (Clytia hemisphaerica_ch_hm2_pilon)
TTCAGAAGATTAAATATTAACAAATCTCTGATTCATAAAACAGAAAACTG
AAGAACAAGAAGATGTTTTCGTCAGAAATGTTTGTAACAATGATGTTTGT
AGTATCAGCGCTCAGTATGGTCTATAGTAGACCTATGTCCGATACAAGTC
GTGTTTTACATCAGAAATTGGAAGCTGCTAGAAAATCTTTGATCGCGGAG
AAacaacttttggaaaaaagtaaGACTCAAATACATACGCCGATGGTTTT
TAAAGACACATCCAAAGCAACTAAAGCACAGATCTTAAATCAAAAAGTAG
ATTCAGCACGTCAGCTGGGTATTGGGAGTACCGTACGCGATGAGAATGGT
GAAGAAACACTAACGGGAGCTAAGCTATTAAAAGTAGCCTGTCGTATGAG
ATGTGGTAGCTCGTTTTCAGAATGCATCTCACAGGTTGAGAATTCGGAAG
AAGCAATGATGGTTTGTCATCAAGGAAGGCAAGGATGTATAAAGGAATGT
AGATGGACTCTGAGGAGTGGAATGTCGGAGACTGTGGTTACTGATTAAAA
GAACGACAGATCATGGATTTTATAATTTATACAATTCTATTATGGTTGAT
TTAAGCTTAAGAATGGGTAAATACGCTATTGAGTTTAAAGGGGATCGGAA
CTATAACGCTTTGTATCTGGCGGTTTCTTTTGCTTTCGAGCGGTGCAttt
ttttACGAAATTTAgcgataaattttattttcaatttgg

Coding sequence (CDS) from alignment at sc0000094_pilon:535226..535964+

>MSTRG.12460.1.p1 ID=MSTRG.12460.1.p1|Name=MSTRG.12460.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=486bp|location=Sequence derived from alignment at sc0000094_pilon:535226..535964+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTTCGTCAGAAATGTTTGTAACAATGATGTTTGTAGTATCAGCGCT
CAGTATGGTCTATAGTAGACCTATGTCCGATACAAGTCGTGTTTTACATC
AGAAATTGGAAGCTGCTAGAAAATCTTTGATCGCGGAGAAacaacttttg
gaaaaaagtaaGACTCAAATACATACGCCGATGGTTTTTAAAGACACATC
CAAAGCAACTAAAGCACAGATCTTAAATCAAAAAGTAGATTCAGCACGTC
AGCTGGGTATTGGGAGTACCGTACGCGATGAGAATGGTGAAGAAACACTA
ACGGGAGCTAAGCTATTAAAAGTAGCCTGTCGTATGAGATGTGGTAGCTC
GTTTTCAGAATGCATCTCACAGGTTGAGAATTCGGAAGAAGCAATGATGG
TTTGTCATCAAGGAAGGCAAGGATGTATAAAGGAATGTAGATGGACTCTG
AGGAGTGGAATGTCGGAGACTGTGGTTACTGATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12460MSTRG.12460Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12460.1.p1.exon1MSTRG.12460.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12460.1.p1MSTRG.12460.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000094_pilongenomesc0000094_pilon:535226..535964 +