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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000094_pilon:484922..491982+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12456.1.p3 ID=MSTRG.12456.1.p3|Name=MSTRG.12456.1.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7061bp|location=Sequence derived from alignment at sc0000094_pilon:484922..491982+ (Clytia hemisphaerica_ch_hm2_pilon)
GTGAGTTTTGAGCAGaaaaaaaaCAGACATTGACttgtaattgttttttt
gtttttttttagtgaacatagaaaaaaagattgaaaatatttgatatcGA
AGATGAAAGAAATGGACGTGCAGTTTGAAAGACAAGTATCCTGTACCCAC
TCTGATCCAAACAAAATTGCAGTCATTGAATTTCATCAATGTAAAACATG
TCCTGAAGTGTTATATTCATTTAATAAATCCTCATTAAATGTAACTTTCC
AGTTGGATGAATGGAACAAATTTGTGAAAGATATTAAAAGGAATTTCAAT
GTGGTAGATTCAGAGACTGTTACATTGCCAGAGGATACTACACAAATCAC
CACAACAAATGATGATTTAGAGTTTGTTTGTGAGACATGTTTTCAGATTT
TTCTATGTCCACTGAAATATAAAGAACATCGTGAAACTCATTTGAAGAGG
AGACCATTCCAATGTATGATATGTGAACgacgtttttcaaaaaaggaatt
ACTTGATAAACATTTGACGCTacataaacaaaagaaaaccaagaaaaaaa
gtaaaagtaaaagccaaagaaatcagaaaaaaagaaatggtacaaaaCCC
AATCAACAAGAACCTGCTTCCAAAGAAACAAAAGACACCCTTTCAGATTC
AACTCATATTTCTAGCCATGAAACtgatacaaagaaaaaatacaaatgtG
GTTATTGCGGCAAGTTATTTATCTCCAATAGCAAATTGACCTGTCATATT
CGTGTTCATACTGGTGAAAAACCTTTCCATTGTGAAGTCTGTGGAAAGGA
ATTTAGAGGAAAAAGCTCACTCACAAAGCATTATCTAACACACACTGGTG
AGAAAAATCATGTTTGTGATGTCTGTGGGAAATCTTTTTCTGTTACTTCG
CATCTTAAAAGACATTATATCACTCATACAGgagagaaatcattttcatg
tAAGATCTGTGGTGAAAGGTTTAAGTATCCATACAACTTGAAGCAGCATT
CTCGTGTTCACACTGGAGAAACTCATAAATGTGACAAATGTGAAATCTCT
TTTATTGATGGAAAAAGTTTAAATAAGCATAAGAAGATTCACAGACCATC
AAAGGAGCCCCCATCTTATGAATGTACCGTTTGTGGGAAAAAGTATGGAA
AACCTTCACTACTGGCTAGGCACATGGGAATTCACACTGGGGAAAGGCCT
CATGAATGTGAGGTGTGTGGAAAAACATACGGCTTTCCAAGTGAACttga
aaaacataaaagaaCACATACTGGGGAAAAACCATTCATATGTGAGGTTT
GTGGAAAAGGTTTTAATGATAAACGTAATCGGGATAGACATCTAAGGAAT
GTCCATAAAGGATCTGATAAACCACCTCTACATTGTGATACTTGTGGTGA
AGCTTTTACTGATTTAGCAAGTTTAGCAGACCATTCAAAGACTCATGAAG
GTGATGATGTGAATAAGTGTGCTGTTTGTGGTAAAACATTTACAGAAGCA
AGCGAACTGGTAAATCATTATCAGTTACACAAGAAACTTGAATCTCAAGA
AGAAAGTAGTGAATCACAACCTGAGGAAAATGTTTCAGATGCTCCTCCTG
AGGTTCATGAATGCGCTGTatgtggtaaaaaaatttcagaatcaAGTGAC
TTGGTAAAACATTACCACTTACATCGGGCTAACAAATAGTTTCTTTTCTA
ATGACAATTTgttttagttttgaaaaagatataCCCAACGTCATTGGTTG
GagtaaaagtttatttttcctATTCACAAAGCTAACTGTTATCATTCGTG
AAAGAATTTTCctgaaatttaatttcatcattttggGGTATCACAAAATG
AATTCCTTGTTGCTCCTTTTTAAAGCTGGGggtccactgaaaaaaaaaag
tttgtcacAAATACCTGTCGCAAAAAATGAGTCCTGACATATGTCTGGAA
TCAAAagtctattgttcttttttacgacgaagtaaaaaagaataaacgat
gtagaatgaaaacgttttcatttgTCATCGCTTAATTTCTTTTCACCCTA
tcgcaaataaaacaataggtttTCAATTCCAAACAtctgtctggatttat
tttttgcgacaAACTAATTCGCAATGAAGTTGAAAAAACAGAAATTGACT
TGTattggtttttttttgtttctttttagtgaacaaagaaaaaacattga
aaaatatttgatatcaAAGATGAAAGAAATGGATGTGCAGTTTGAAAGAG
AAGCATCCTGTACCCACTCTGATCTAAACAAAATTGCAGTCATTGAGTTT
CATCAATGTAAAACTTGTCCTGAAGTGTTATATTCGTTTAATAAATCCTC
ATTAAATGTCACTTTCCAACTGGATGAATGGAATCAATTTGTGAAAGATA
TTAAAGAGAATTTCAATGTGGTAGATTCAGATACTGTTACATTGCCAGAA
GATACTACACAAATCACCGCAACAAATGATGATGTGGAATTTGTTTGTGA
GAcgtgttttcagatttttccaTGTCCACTAAAGTATAAAGAACATTGTG
AAACTCATTTGAAGAGGAGACCATTCCAATGTATGATATGTGAACGACGT
TTTTCGAAAAAGGAATTACTTGATAAACATTTGACGCTgcataaacaaaa
gaaaaccaagaaaaaaagtaaaagtaaaagccaaagaaatcagaaaaaaa
gaaatggtacaaaaCCCAATCAACAAGAACCTGCCTCCAAAGAAACAAAA
GACACCCTTCGAGATTCAACTCATATTCCTAGCCATGAAACtgatacaaa
gaaaaaatacaaatgtGGTTATTGCGGCAAGTTATTTATCTCCAATAGCA
AATTGACATGTCATATTCGTGTTCATACTGGTGAAAAACCTTTCCGATGT
GAAGTCTGTGGAAAGGATTTTAGAGGAAAAAGCTCACTCACAAAGCATTT
TCTAACACACACTGGTGAGAAAAATCATGTTTGTGATGTCTGTGGGAAAT
CTTTTTCTGTTACTTCGAATCTGAAGAGACATTATATCACTCATACAGGA
GAGAAATCACTTTCATGTAAGATCTGCGGTGAAAGTTTTAAGTATCCATA
CAATTTGAAGCAGCATTCTCGTGTTCACACTGGAGAAACTCATGAATGTG
ACAAATGTGAAACGTCTTTTATTGATAGAAAAAGTTTAAATAAGCATAGG
AAGATTCACAGACCATCAAAGGAGCCCCCATCTTATGAATGTACAGTTTG
TGGGAAAAAATATAGGGCACCTTCACTGTTGGCAAGACACATGGGAATTC
ACACTGGGGAAAGGCCTCATGAGTGTCAGGTGTGTGGAAAAACATATGGC
TTTCCAAGTGAACttgaaaaacataaaagaaCACATACTGGGGAAAAACC
ATTCATATGTGAGGTTTGTGGAAAAGGTTTTAATGATAAACGTAATCGAG
ATAGACATCAAAGGAATGTCCATAAAGGATCTGATAAACCACCTCTACAT
TGTGATACTTGTGGTGAAGCTTTCACTGATTTAGCAAGTTTAGCAGACCA
TTCAAAGAATCATGAAGGTGATGATGTGAGTAAGTGTGCTGTTTGTGGTA
AAACATTTACTGAAGCAAGCGAACTGGTAAATCATTATCAGTTACACAAG
AAACTTGAATCTCAAGAAGAAAGTAGTGAATCACAACCTGAGGAAAATGT
TTCAGATGCTCCTCCCGAGGTTCATGAATGCGCTgtgtgtggtaaaacat
tttcagaaTCACGTGACTTGGTAAAACATTACCAATTACATCGGGCTAAC
AAATAGTTTCTTTTCTAATGACAATTTGTACTAGGTTTGAAAAAGATATA
CCTGTCCTCATTGGTCGGagtaaaaggttttttttcctCTTCAAAAAGCT
AACTGTTATCATTCTTGAAGGATTTTTCCTGAAATTTAAATTCATTATTT
TGGGTATCACAAAATGAATTCCTTGTTGCTCctttaaaacacaaattttg
cTCTAAACACTCATTTTTTGGGATTAGTGCTACTCAGAAAATATCCGCAA
CCATAAAAAGGTTGTCCCATTAAAAGGttgtcttttcgcttcaatccTTT
TATCTATTTTCTTACCTATTTCAGAAAGTCGAATTTCTTTTAGTTTCATG
ACAAGTGGGGAGCCAAAATTATTGAATGTGTTCTTTCTCTTATATAAGGG
ATATGTTATTTGGCTTTCAGACTCTTTTGAGAATATATttctattgtttg
ttttatttcgTTTAGACAAggaaaataaagagaaaaagaataagaaaaac
taaaatatcAATAGCAACAATGGATCATTTAACAGAAGAATCGTGTACTC
ATTCAGACATCAACAAAGTGGCTACAATTGAATTTTATCAATGTGGACCT
TGCAATGAGATTCTGTATTCTTTCAACAAAATGACTATGAACTTGTCGTT
CCGCATGGACCAATGGAACACTTTTGTGAAACAGTTGATGGCTAATTTCA
ATGTAAACGCAACAAATGTTTCTCTACAAAATCTTGATTGTAAGGAATGT
GGGCAAACGTTTCCATCAACCGAAAAATTAAGCCAACATATCAGTACTGA
TCCAATGGCCTGTGAGAcctgttttcaaatattttcatgtcaTGTGAAGT
ATAAAGAGCACTGCGACAACCACGTAAAAAAGAAGCCATTCCAATGCTAC
ATTTGTAAGAAAGGTTTTATGCACAAACAATCCCTGGATAAACATATACC
ATTACACAATCAAAGTCAAAACGCTGTTGTCACCAGAGTTGATTTACCAT
ATCGAGTAACTGGATCTTTGATAACGGGATATCGAAATAAACGCACTAAT
GTTGTTCGGAATTTCAAATGTGATTTTTGTGGGAAAGCGTTCGAATTCAA
TAATGCCTTGCAAACGCACATCAGAACTCACACTGGGGAAAAACCTTTTA
AATGTAATATTTGTGAGAAAGCCTTTTCTGATAAGGGTAGCTCAGTAAAG
CATCAACGTACGCATACTGGTGAGAGACCACACAAGTGCGATGTTTGTGA
GAAAGCGTTTGCAAATGCTGGTAATTTACGTTTACATTACATCCAACATA
CTGGGGAGAAACCTTACATTTGTAAAGTGTGTGACGAATCATTCACATGT
CTCTACCTGTTGAACAAACATTTATCTGTACATTCTGGCAAGCcttttgt
ttacagaaagaacgGAAAACTACACACTTGTGAAATTTGCCAGAAGACTT
ACACCAAAAAGAGTGGGCTACGAAATCACTATAAAGTTCACCAGCCAGGT
TATAATCGTAATCCTCGCTCCGCCCCATTGTTAGAGTGTACTGTTTGTGG
GCATAAATGTAAATATCCGTCCGATTTGAAGAAACATATGTTGTACAAGC
ACAATCCTGATGAGAGACCTCACGAGTGCGATGTTTGTGGTAAAAGATTT
GTGCAGCCTTCTAGTTTAGCATTACACCAAAGAAGAGCTCACACTGGTGA
GAAACCATTTCCTTGCGACATCTGTGGAAAGAGATATTACTCCGTTAGTG
ATCGAAATGAACACATGAAGGTTTCAGCCCACCCGAAATGTGATGTTTGT
GGGCAAGCTTTTCCAAATCGTAGAGATTGGAAGACTCATATGAAGACACA
TAATACTACAGGCCAAGAAAGTGATTCAACTAAAGAGAAACCAACAAACC
AGGGAGAAACACATGACAAAACAGCTTctcaattgaaaaaatattccgTA
AAGCATGCAAGAAAGTATGGATGTAAATTGTGTGAAAAGAAGTACAAATA
CTCCCAAGATTTGAAAAAGCATGTAAAGAAAGAACACGACGGTGGACTTG
ACAAAGAGAAAACTGATATCGCtcaattcaacataaacaaagaaaCTACA
CACGAGTTTACCACTGATGAGATCCCAGCTACAGTGAATGAGCTGCAAAC
GGTCAGTGCCAAAGATCCACTCACACAGAAAAATATTAGCTTCTCTGAGG
ATTTCCAATCTGGTGCTCACAAGTGCGCTGTTTGTAGTAAATCATTTCCA
CAATCAGCTGAATTATGGGAACATTTTCAACTTCACAAAAAGTAGTCACT
ACATTACCACACGAAAATAAGTAGACATGTGATTAACACGAATTAAGGAA
TTTTCTGTTAATTAAAACCCCTTTAATTATACTCAGTCGTGTtgttgaaa
aagcaaataaaattcttttaatttttttgtgtgttaatttcaaggACGTT
TATAATTATGTGTCTacttattttcgtgtaataaggtattttaGTATTCG
TACTTTTTAGTGCGAGTGCTGGAGaagcttttttttgcaaatggaTGCAA
TAGTTTTGGCTTTTGATCATGACAGAATCAAGTATAAAGGATTCAGAAAA
TCTTACTCAAATAATGAAAAACTATTAGTTAATTGCACACGAAAACTTCC
CCAATTCCTTCGCCAGCTTGATTTTTTCGCTTGTGTTTGTAtaatttcta
acatttttttaagattgAGCTTTGAGAGAAGATCGTTCGATGGAATTCCT
TCCTTGTATTACGCccaggtgccaaataaacggagGGTGAATAAGCGTAG
GGAAGGGAGAAAACGGTTGAGATATTTTCAAATGTTGCTAAATACGGTTT
GGGTATTTATTGCCAGGGGTGGGAAATTATTCCTCACAATATTCACTTCC
CctcaaaaaaggtaaatataGACAAAATCATGCGATTTGGAGCaaaaaaa
aGGGACGTTTCTTATGATGtatcaaaaattaagaaaggAGTAGTCTTAAT
AAGGTTCGTGCTTGGTCGGAAAAGAAACTTACAAACGGGAGACATTTTTT
GGCACCTGATAGCAGTACTCCGTTTCGTTAATCACTCTAGTCTTTTGTCC
TAAAGGAGGAGTAGTATTTAGTTTTAAACTTTAAATCTTCAGTGCCATAA
AACAACTGTAACagtgattataaaaaaataattaaaacctCTGAAAGTCT
TTGATATCTAATTCAATAAGCCAATAGTCTTATAGAGCAATGGGCTCTTT
TTGataatgtt Coding sequence (CDS) from alignment at sc0000094_pilon:484922..491982+ >MSTRG.12456.1.p3 ID=MSTRG.12456.1.p3|Name=MSTRG.12456.1.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3036bp|location=Sequence derived from alignment at sc0000094_pilon:484922..491982+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGAAATGGACGTGCAGTTTGAAAGACAAGTATCCTGTACCCACTC
TGATCCAAACAAAATTGCAGTCATTGAATTTCATCAATGTAAAACATGTC
CTGAAGTGTTATATTCATTTAATAAATCCTCATTAAATGTAACTTTCCAG
TTGGATGAATGGAACAAATTTGTGAAAGATATTAAAAGGAATTTCAATGT
GGTAGATTCAGAGACTGTTACATTGCCAGAGGATACTACACAAATCACCA
CAACAAATGATGATTTAGAGTTTGTTTGTGAGACATGTTTTCAGATTTTT
CTATGTCCACTGAAATATAAAGAACATCGTGAAACTCATTTGAAGAGGAG
ACCATTCCAATGTATGATATGTGAACgacgtttttcaaaaaaggaattAC
TTGATAAACATTTGACGCTacataaacaaaagaaaaccaagaaaaaaagt
aaaagtaaaagccaaagaaatcagaaaaaaagaaatggtacaaaaCCCAA
TCAACAAGAACCTGCTTCCAAAGAAACAAAAGACACCCTTTCAGATTCAA
CTCATATTTCTAGCCATGAAACtgatacaaagaaaaaatacaaatgtGGT
TATTGCGGCAAGTTATTTATCTCCAATAGCAAATTGACCTGTCATATTCG
TGTTCATACTGGTGAAAAACCTTTCCATTGTGAAGTCTGTGGAAAGGAAT
TTAGAGGAAAAAGCTCACTCACAAAGCATTATCTAACACACACTGGTGAG
AAAAATCATGTTTGTGATGTCTGTGGGAAATCTTTTTCTGTTACTTCGCA
TCTTAAAAGACATTATATCACTCATACAGgagagaaatcattttcatgtA
AGATCTGTGGTGAAAGGTTTAAGTATCCATACAACTTGAAGCAGCATTCT
CGTGTTCACACTGGAGAAACTCATAAATGTGACAAATGTGAAATCTCTTT
TATTGATGGAAAAAGTTTAAATAAGCATAAGAAGATTCACAGACCATCAA
AGGAGCCCCCATCTTATGAATGTACCGTTTGTGGGAAAAAGTATGGAAAA
CCTTCACTACTGGCTAGGCACATGGGAATTCACACTGGGGAAAGGCCTCA
TGAATGTGAGGTGTGTGGAAAAACATACGGCTTTCCAAGTGAACttgaaa
aacataaaagaaCACATACTGGGGAAAAACCATTCATATGTGAGGTTTGT
GGAAAAGGTTTTAATGATAAACGTAATCGGGATAGACATCTAAGGAATGT
CCATAAAGGATCTGATAAACCACCTCTACATTGTGATACTTGTGGTGAAG
CTTTTACTGATTTAGCAAGTTTAGCAGACCATTCAAAGACTCATGAAGGT
GATGATGTGAATAAGTGTGCTGTTTGTGGTAAAACATTTACAGAAGCAAG
CGAACTGGTAAATCATTATCAGTTACACAAGAAACTTGAATCTCAAGAAG
AAAGTAGTGAATCACAACCTGAGGAAAATGTTTCAGATGCTCCTCCTGAG
GTTCATGAATGCGCTtgaATGAAAGAAATGGACGTGCAGTTTGAAAGACA
AGTATCCTGTACCCACTCTGATCCAAACAAAATTGCAGTCATTGAATTTC
ATCAATGTAAAACATGTCCTGAAGTGTTATATTCATTTAATAAATCCTCA
TTAAATGTAACTTTCCAGTTGGATGAATGGAACAAATTTGTGAAAGATAT
TAAAAGGAATTTCAATGTGGTAGATTCAGAGACTGTTACATTGCCAGAGG
ATACTACACAAATCACCACAACAAATGATGATTTAGAGTTTGTTTGTGAG
ACATGTTTTCAGATTTTTCTATGTCCACTGAAATATAAAGAACATCGTGA
AACTCATTTGAAGAGGAGACCATTCCAATGTATGATATGTGAACgacgtt
tttcaaaaaaggaattACTTGATAAACATTTGACGCTacataaacaaaag
aaaaccaagaaaaaaagtaaaagtaaaagccaaagaaatcagaaaaaaag
aaatggtacaaaaCCCAATCAACAAGAACCTGCTTCCAAAGAAACAAAAG
ACACCCTTTCAGATTCAACTCATATTTCTAGCCATGAAACtgatacaaag
aaaaaatacaaatgtGGTTATTGCGGCAAGTTATTTATCTCCAATAGCAA
ATTGACCTGTCATATTCGTGTTCATACTGGTGAAAAACCTTTCCATTGTG
AAGTCTGTGGAAAGGAATTTAGAGGAAAAAGCTCACTCACAAAGCATTAT
CTAACACACACTGGTGAGAAAAATCATGTTTGTGATGTCTGTGGGAAATC
TTTTTCTGTTACTTCGCATCTTAAAAGACATTATATCACTCATACAGgag
agaaatcattttcatgtAAGATCTGTGGTGAAAGGTTTAAGTATCCATAC
AACTTGAAGCAGCATTCTCGTGTTCACACTGGAGAAACTCATAAATGTGA
CAAATGTGAAATCTCTTTTATTGATGGAAAAAGTTTAAATAAGCATAAGA
AGATTCACAGACCATCAAAGGAGCCCCCATCTTATGAATGTACCGTTTGT
GGGAAAAAGTATGGAAAACCTTCACTACTGGCTAGGCACATGGGAATTCA
CACTGGGGAAAGGCCTCATGAATGTGAGGTGTGTGGAAAAACATACGGCT
TTCCAAGTGAACttgaaaaacataaaagaaCACATACTGGGGAAAAACCA
TTCATATGTGAGGTTTGTGGAAAAGGTTTTAATGATAAACGTAATCGGGA
TAGACATCTAAGGAATGTCCATAAAGGATCTGATAAACCACCTCTACATT
GTGATACTTGTGGTGAAGCTTTTACTGATTTAGCAAGTTTAGCAGACCAT
TCAAAGACTCATGAAGGTGATGATGTGAATAAGTGTGCTGTTTGTGGTAA
AACATTTACAGAAGCAAGCGAACTGGTAAATCATTATCAGTTACACAAGA
AACTTGAATCTCAAGAAGAAAGTAGTGAATCACAACCTGAGGAAAATGTT
TCAGATGCTCCTCCTGAGGTTCATGAATGCGCTtga
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000094_pilon | genome | sc0000094_pilon:484922..491982 + |
|
