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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000094_pilon:484922..491982+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12456.1.p2 ID=MSTRG.12456.1.p2|Name=MSTRG.12456.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7061bp|location=Sequence derived from alignment at sc0000094_pilon:484922..491982+ (Clytia hemisphaerica_ch_hm2_pilon)
GTGAGTTTTGAGCAGaaaaaaaaCAGACATTGACttgtaattgttttttt
gtttttttttagtgaacatagaaaaaaagattgaaaatatttgatatcGA
AGATGAAAGAAATGGACGTGCAGTTTGAAAGACAAGTATCCTGTACCCAC
TCTGATCCAAACAAAATTGCAGTCATTGAATTTCATCAATGTAAAACATG
TCCTGAAGTGTTATATTCATTTAATAAATCCTCATTAAATGTAACTTTCC
AGTTGGATGAATGGAACAAATTTGTGAAAGATATTAAAAGGAATTTCAAT
GTGGTAGATTCAGAGACTGTTACATTGCCAGAGGATACTACACAAATCAC
CACAACAAATGATGATTTAGAGTTTGTTTGTGAGACATGTTTTCAGATTT
TTCTATGTCCACTGAAATATAAAGAACATCGTGAAACTCATTTGAAGAGG
AGACCATTCCAATGTATGATATGTGAACgacgtttttcaaaaaaggaatt
ACTTGATAAACATTTGACGCTacataaacaaaagaaaaccaagaaaaaaa
gtaaaagtaaaagccaaagaaatcagaaaaaaagaaatggtacaaaaCCC
AATCAACAAGAACCTGCTTCCAAAGAAACAAAAGACACCCTTTCAGATTC
AACTCATATTTCTAGCCATGAAACtgatacaaagaaaaaatacaaatgtG
GTTATTGCGGCAAGTTATTTATCTCCAATAGCAAATTGACCTGTCATATT
CGTGTTCATACTGGTGAAAAACCTTTCCATTGTGAAGTCTGTGGAAAGGA
ATTTAGAGGAAAAAGCTCACTCACAAAGCATTATCTAACACACACTGGTG
AGAAAAATCATGTTTGTGATGTCTGTGGGAAATCTTTTTCTGTTACTTCG
CATCTTAAAAGACATTATATCACTCATACAGgagagaaatcattttcatg
tAAGATCTGTGGTGAAAGGTTTAAGTATCCATACAACTTGAAGCAGCATT
CTCGTGTTCACACTGGAGAAACTCATAAATGTGACAAATGTGAAATCTCT
TTTATTGATGGAAAAAGTTTAAATAAGCATAAGAAGATTCACAGACCATC
AAAGGAGCCCCCATCTTATGAATGTACCGTTTGTGGGAAAAAGTATGGAA
AACCTTCACTACTGGCTAGGCACATGGGAATTCACACTGGGGAAAGGCCT
CATGAATGTGAGGTGTGTGGAAAAACATACGGCTTTCCAAGTGAACttga
aaaacataaaagaaCACATACTGGGGAAAAACCATTCATATGTGAGGTTT
GTGGAAAAGGTTTTAATGATAAACGTAATCGGGATAGACATCTAAGGAAT
GTCCATAAAGGATCTGATAAACCACCTCTACATTGTGATACTTGTGGTGA
AGCTTTTACTGATTTAGCAAGTTTAGCAGACCATTCAAAGACTCATGAAG
GTGATGATGTGAATAAGTGTGCTGTTTGTGGTAAAACATTTACAGAAGCA
AGCGAACTGGTAAATCATTATCAGTTACACAAGAAACTTGAATCTCAAGA
AGAAAGTAGTGAATCACAACCTGAGGAAAATGTTTCAGATGCTCCTCCTG
AGGTTCATGAATGCGCTGTatgtggtaaaaaaatttcagaatcaAGTGAC
TTGGTAAAACATTACCACTTACATCGGGCTAACAAATAGTTTCTTTTCTA
ATGACAATTTgttttagttttgaaaaagatataCCCAACGTCATTGGTTG
GagtaaaagtttatttttcctATTCACAAAGCTAACTGTTATCATTCGTG
AAAGAATTTTCctgaaatttaatttcatcattttggGGTATCACAAAATG
AATTCCTTGTTGCTCCTTTTTAAAGCTGGGggtccactgaaaaaaaaaag
tttgtcacAAATACCTGTCGCAAAAAATGAGTCCTGACATATGTCTGGAA
TCAAAagtctattgttcttttttacgacgaagtaaaaaagaataaacgat
gtagaatgaaaacgttttcatttgTCATCGCTTAATTTCTTTTCACCCTA
tcgcaaataaaacaataggtttTCAATTCCAAACAtctgtctggatttat
tttttgcgacaAACTAATTCGCAATGAAGTTGAAAAAACAGAAATTGACT
TGTattggtttttttttgtttctttttagtgaacaaagaaaaaacattga
aaaatatttgatatcaAAGATGAAAGAAATGGATGTGCAGTTTGAAAGAG
AAGCATCCTGTACCCACTCTGATCTAAACAAAATTGCAGTCATTGAGTTT
CATCAATGTAAAACTTGTCCTGAAGTGTTATATTCGTTTAATAAATCCTC
ATTAAATGTCACTTTCCAACTGGATGAATGGAATCAATTTGTGAAAGATA
TTAAAGAGAATTTCAATGTGGTAGATTCAGATACTGTTACATTGCCAGAA
GATACTACACAAATCACCGCAACAAATGATGATGTGGAATTTGTTTGTGA
GAcgtgttttcagatttttccaTGTCCACTAAAGTATAAAGAACATTGTG
AAACTCATTTGAAGAGGAGACCATTCCAATGTATGATATGTGAACGACGT
TTTTCGAAAAAGGAATTACTTGATAAACATTTGACGCTgcataaacaaaa
gaaaaccaagaaaaaaagtaaaagtaaaagccaaagaaatcagaaaaaaa
gaaatggtacaaaaCCCAATCAACAAGAACCTGCCTCCAAAGAAACAAAA
GACACCCTTCGAGATTCAACTCATATTCCTAGCCATGAAACtgatacaaa
gaaaaaatacaaatgtGGTTATTGCGGCAAGTTATTTATCTCCAATAGCA
AATTGACATGTCATATTCGTGTTCATACTGGTGAAAAACCTTTCCGATGT
GAAGTCTGTGGAAAGGATTTTAGAGGAAAAAGCTCACTCACAAAGCATTT
TCTAACACACACTGGTGAGAAAAATCATGTTTGTGATGTCTGTGGGAAAT
CTTTTTCTGTTACTTCGAATCTGAAGAGACATTATATCACTCATACAGGA
GAGAAATCACTTTCATGTAAGATCTGCGGTGAAAGTTTTAAGTATCCATA
CAATTTGAAGCAGCATTCTCGTGTTCACACTGGAGAAACTCATGAATGTG
ACAAATGTGAAACGTCTTTTATTGATAGAAAAAGTTTAAATAAGCATAGG
AAGATTCACAGACCATCAAAGGAGCCCCCATCTTATGAATGTACAGTTTG
TGGGAAAAAATATAGGGCACCTTCACTGTTGGCAAGACACATGGGAATTC
ACACTGGGGAAAGGCCTCATGAGTGTCAGGTGTGTGGAAAAACATATGGC
TTTCCAAGTGAACttgaaaaacataaaagaaCACATACTGGGGAAAAACC
ATTCATATGTGAGGTTTGTGGAAAAGGTTTTAATGATAAACGTAATCGAG
ATAGACATCAAAGGAATGTCCATAAAGGATCTGATAAACCACCTCTACAT
TGTGATACTTGTGGTGAAGCTTTCACTGATTTAGCAAGTTTAGCAGACCA
TTCAAAGAATCATGAAGGTGATGATGTGAGTAAGTGTGCTGTTTGTGGTA
AAACATTTACTGAAGCAAGCGAACTGGTAAATCATTATCAGTTACACAAG
AAACTTGAATCTCAAGAAGAAAGTAGTGAATCACAACCTGAGGAAAATGT
TTCAGATGCTCCTCCCGAGGTTCATGAATGCGCTgtgtgtggtaaaacat
tttcagaaTCACGTGACTTGGTAAAACATTACCAATTACATCGGGCTAAC
AAATAGTTTCTTTTCTAATGACAATTTGTACTAGGTTTGAAAAAGATATA
CCTGTCCTCATTGGTCGGagtaaaaggttttttttcctCTTCAAAAAGCT
AACTGTTATCATTCTTGAAGGATTTTTCCTGAAATTTAAATTCATTATTT
TGGGTATCACAAAATGAATTCCTTGTTGCTCctttaaaacacaaattttg
cTCTAAACACTCATTTTTTGGGATTAGTGCTACTCAGAAAATATCCGCAA
CCATAAAAAGGTTGTCCCATTAAAAGGttgtcttttcgcttcaatccTTT
TATCTATTTTCTTACCTATTTCAGAAAGTCGAATTTCTTTTAGTTTCATG
ACAAGTGGGGAGCCAAAATTATTGAATGTGTTCTTTCTCTTATATAAGGG
ATATGTTATTTGGCTTTCAGACTCTTTTGAGAATATATttctattgtttg
ttttatttcgTTTAGACAAggaaaataaagagaaaaagaataagaaaaac
taaaatatcAATAGCAACAATGGATCATTTAACAGAAGAATCGTGTACTC
ATTCAGACATCAACAAAGTGGCTACAATTGAATTTTATCAATGTGGACCT
TGCAATGAGATTCTGTATTCTTTCAACAAAATGACTATGAACTTGTCGTT
CCGCATGGACCAATGGAACACTTTTGTGAAACAGTTGATGGCTAATTTCA
ATGTAAACGCAACAAATGTTTCTCTACAAAATCTTGATTGTAAGGAATGT
GGGCAAACGTTTCCATCAACCGAAAAATTAAGCCAACATATCAGTACTGA
TCCAATGGCCTGTGAGAcctgttttcaaatattttcatgtcaTGTGAAGT
ATAAAGAGCACTGCGACAACCACGTAAAAAAGAAGCCATTCCAATGCTAC
ATTTGTAAGAAAGGTTTTATGCACAAACAATCCCTGGATAAACATATACC
ATTACACAATCAAAGTCAAAACGCTGTTGTCACCAGAGTTGATTTACCAT
ATCGAGTAACTGGATCTTTGATAACGGGATATCGAAATAAACGCACTAAT
GTTGTTCGGAATTTCAAATGTGATTTTTGTGGGAAAGCGTTCGAATTCAA
TAATGCCTTGCAAACGCACATCAGAACTCACACTGGGGAAAAACCTTTTA
AATGTAATATTTGTGAGAAAGCCTTTTCTGATAAGGGTAGCTCAGTAAAG
CATCAACGTACGCATACTGGTGAGAGACCACACAAGTGCGATGTTTGTGA
GAAAGCGTTTGCAAATGCTGGTAATTTACGTTTACATTACATCCAACATA
CTGGGGAGAAACCTTACATTTGTAAAGTGTGTGACGAATCATTCACATGT
CTCTACCTGTTGAACAAACATTTATCTGTACATTCTGGCAAGCcttttgt
ttacagaaagaacgGAAAACTACACACTTGTGAAATTTGCCAGAAGACTT
ACACCAAAAAGAGTGGGCTACGAAATCACTATAAAGTTCACCAGCCAGGT
TATAATCGTAATCCTCGCTCCGCCCCATTGTTAGAGTGTACTGTTTGTGG
GCATAAATGTAAATATCCGTCCGATTTGAAGAAACATATGTTGTACAAGC
ACAATCCTGATGAGAGACCTCACGAGTGCGATGTTTGTGGTAAAAGATTT
GTGCAGCCTTCTAGTTTAGCATTACACCAAAGAAGAGCTCACACTGGTGA
GAAACCATTTCCTTGCGACATCTGTGGAAAGAGATATTACTCCGTTAGTG
ATCGAAATGAACACATGAAGGTTTCAGCCCACCCGAAATGTGATGTTTGT
GGGCAAGCTTTTCCAAATCGTAGAGATTGGAAGACTCATATGAAGACACA
TAATACTACAGGCCAAGAAAGTGATTCAACTAAAGAGAAACCAACAAACC
AGGGAGAAACACATGACAAAACAGCTTctcaattgaaaaaatattccgTA
AAGCATGCAAGAAAGTATGGATGTAAATTGTGTGAAAAGAAGTACAAATA
CTCCCAAGATTTGAAAAAGCATGTAAAGAAAGAACACGACGGTGGACTTG
ACAAAGAGAAAACTGATATCGCtcaattcaacataaacaaagaaaCTACA
CACGAGTTTACCACTGATGAGATCCCAGCTACAGTGAATGAGCTGCAAAC
GGTCAGTGCCAAAGATCCACTCACACAGAAAAATATTAGCTTCTCTGAGG
ATTTCCAATCTGGTGCTCACAAGTGCGCTGTTTGTAGTAAATCATTTCCA
CAATCAGCTGAATTATGGGAACATTTTCAACTTCACAAAAAGTAGTCACT
ACATTACCACACGAAAATAAGTAGACATGTGATTAACACGAATTAAGGAA
TTTTCTGTTAATTAAAACCCCTTTAATTATACTCAGTCGTGTtgttgaaa
aagcaaataaaattcttttaatttttttgtgtgttaatttcaaggACGTT
TATAATTATGTGTCTacttattttcgtgtaataaggtattttaGTATTCG
TACTTTTTAGTGCGAGTGCTGGAGaagcttttttttgcaaatggaTGCAA
TAGTTTTGGCTTTTGATCATGACAGAATCAAGTATAAAGGATTCAGAAAA
TCTTACTCAAATAATGAAAAACTATTAGTTAATTGCACACGAAAACTTCC
CCAATTCCTTCGCCAGCTTGATTTTTTCGCTTGTGTTTGTAtaatttcta
acatttttttaagattgAGCTTTGAGAGAAGATCGTTCGATGGAATTCCT
TCCTTGTATTACGCccaggtgccaaataaacggagGGTGAATAAGCGTAG
GGAAGGGAGAAAACGGTTGAGATATTTTCAAATGTTGCTAAATACGGTTT
GGGTATTTATTGCCAGGGGTGGGAAATTATTCCTCACAATATTCACTTCC
CctcaaaaaaggtaaatataGACAAAATCATGCGATTTGGAGCaaaaaaa
aGGGACGTTTCTTATGATGtatcaaaaattaagaaaggAGTAGTCTTAAT
AAGGTTCGTGCTTGGTCGGAAAAGAAACTTACAAACGGGAGACATTTTTT
GGCACCTGATAGCAGTACTCCGTTTCGTTAATCACTCTAGTCTTTTGTCC
TAAAGGAGGAGTAGTATTTAGTTTTAAACTTTAAATCTTCAGTGCCATAA
AACAACTGTAACagtgattataaaaaaataattaaaacctCTGAAAGTCT
TTGATATCTAATTCAATAAGCCAATAGTCTTATAGAGCAATGGGCTCTTT
TTGataatgtt Coding sequence (CDS) from alignment at sc0000094_pilon:484922..491982+ >MSTRG.12456.1.p2 ID=MSTRG.12456.1.p2|Name=MSTRG.12456.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3330bp|location=Sequence derived from alignment at sc0000094_pilon:484922..491982+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTCAGATGCTCCTCCTGAGGTTCATGAATGCGCTtgaacaaagaaa
aaacattgaaaaatatttgatatcaAAGATGAAAGAAATGGATGTGCAGT
TTGAAAGAGAAGCATCCTGTACCCACTCTGATCTAAACAAAATTGCAGTC
ATTGAGTTTCATCAATGTAAAACTTGTCCTGAAGTGTTATATTCGTTTAA
TAAATCCTCATTAAATGTCACTTTCCAACTGGATGAATGGAATCAATTTG
TGAAAGATATTAAAGAGAATTTCAATGTGGTAGATTCAGATACTGTTACA
TTGCCAGAAGATACTACACAAATCACCGCAACAAATGATGATGTGGAATT
TGTTTGTGAGAcgtgttttcagatttttccaTGTCCACTAAAGTATAAAG
AACATTGTGAAACTCATTTGAAGAGGAGACCATTCCAATGTATGATATGT
GAACGACGTTTTTCGAAAAAGGAATTACTTGATAAACATTTGACGCTgca
taaacaaaagaaaaccaagaaaaaaagtaaaagtaaaagccaaagaaatc
agaaaaaaagaaatggtacaaaaCCCAATCAACAAGAACCTGCCTCCAAA
GAAACAAAAGACACCCTTCGAGATTCAACTCATATTCCTAGCCATGAAAC
tgatacaaagaaaaaatacaaatgtGGTTATTGCGGCAAGTTATTTATCT
CCAATAGCAAATTGACATGTCATATTCGTGTTCATACTGGTGAAAAACCT
TTCCGATGTGAAGTCTGTGGAAAGGATTTTAGAGGAAAAAGCTCACTCAC
AAAGCATTTTCTAACACACACTGGTGAGAAAAATCATGTTTGTGATGTCT
GTGGGAAATCTTTTTCTGTTACTTCGAATCTGAAGAGACATTATATCACT
CATACAGGAGAGAAATCACTTTCATGTAAGATCTGCGGTGAAAGTTTTAA
GTATCCATACAATTTGAAGCAGCATTCTCGTGTTCACACTGGAGAAACTC
ATGAATGTGACAAATGTGAAACGTCTTTTATTGATAGAAAAAGTTTAAAT
AAGCATAGGAAGATTCACAGACCATCAAAGGAGCCCCCATCTTATGAATG
TACAGTTTGTGGGAAAAAATATAGGGCACCTTCACTGTTGGCAAGACACA
TGGGAATTCACACTGGGGAAAGGCCTCATGAGTGTCAGGTGTGTGGAAAA
ACATATGGCTTTCCAAGTGAACttgaaaaacataaaagaaCACATACTGG
GGAAAAACCATTCATATGTGAGGTTTGTGGAAAAGGTTTTAATGATAAAC
GTAATCGAGATAGACATCAAAGGAATGTCCATAAAGGATCTGATAAACCA
CCTCTACATTGTGATACTTGTGGTGAAGCTTTCACTGATTTAGCAAGTTT
AGCAGACCATTCAAAGAATCATGAAGGTGATGATGTGAGTAAGTGTGCTG
TTTGTGGTAAAACATTTACTGAAGCAAGCGAACTGGTAAATCATTATCAG
TTACACAAGAAACTTGAATCTCAAGAAGAAAGTAGTGAATCACAACCTGA
GGAAAATGTTTCAGATGCTCCTCCCGAGGTTCATGAATGCGCTgtgtgtg
gtaaaacattttcagaaTCACGTGACTTGGTAAAACATTACCAATTACAT
CGGGCTAACAAATAGATGTTTCAGATGCTCCTCCTGAGGTTCATGAATGC
GCTtgaacaaagaaaaaacattgaaaaatatttgatatcaAAGATGAAAG
AAATGGATGTGCAGTTTGAAAGAGAAGCATCCTGTACCCACTCTGATCTA
AACAAAATTGCAGTCATTGAGTTTCATCAATGTAAAACTTGTCCTGAAGT
GTTATATTCGTTTAATAAATCCTCATTAAATGTCACTTTCCAACTGGATG
AATGGAATCAATTTGTGAAAGATATTAAAGAGAATTTCAATGTGGTAGAT
TCAGATACTGTTACATTGCCAGAAGATACTACACAAATCACCGCAACAAA
TGATGATGTGGAATTTGTTTGTGAGAcgtgttttcagatttttccaTGTC
CACTAAAGTATAAAGAACATTGTGAAACTCATTTGAAGAGGAGACCATTC
CAATGTATGATATGTGAACGACGTTTTTCGAAAAAGGAATTACTTGATAA
ACATTTGACGCTgcataaacaaaagaaaaccaagaaaaaaagtaaaagta
aaagccaaagaaatcagaaaaaaagaaatggtacaaaaCCCAATCAACAA
GAACCTGCCTCCAAAGAAACAAAAGACACCCTTCGAGATTCAACTCATAT
TCCTAGCCATGAAACtgatacaaagaaaaaatacaaatgtGGTTATTGCG
GCAAGTTATTTATCTCCAATAGCAAATTGACATGTCATATTCGTGTTCAT
ACTGGTGAAAAACCTTTCCGATGTGAAGTCTGTGGAAAGGATTTTAGAGG
AAAAAGCTCACTCACAAAGCATTTTCTAACACACACTGGTGAGAAAAATC
ATGTTTGTGATGTCTGTGGGAAATCTTTTTCTGTTACTTCGAATCTGAAG
AGACATTATATCACTCATACAGGAGAGAAATCACTTTCATGTAAGATCTG
CGGTGAAAGTTTTAAGTATCCATACAATTTGAAGCAGCATTCTCGTGTTC
ACACTGGAGAAACTCATGAATGTGACAAATGTGAAACGTCTTTTATTGAT
AGAAAAAGTTTAAATAAGCATAGGAAGATTCACAGACCATCAAAGGAGCC
CCCATCTTATGAATGTACAGTTTGTGGGAAAAAATATAGGGCACCTTCAC
TGTTGGCAAGACACATGGGAATTCACACTGGGGAAAGGCCTCATGAGTGT
CAGGTGTGTGGAAAAACATATGGCTTTCCAAGTGAACttgaaaaacataa
aagaaCACATACTGGGGAAAAACCATTCATATGTGAGGTTTGTGGAAAAG
GTTTTAATGATAAACGTAATCGAGATAGACATCAAAGGAATGTCCATAAA
GGATCTGATAAACCACCTCTACATTGTGATACTTGTGGTGAAGCTTTCAC
TGATTTAGCAAGTTTAGCAGACCATTCAAAGAATCATGAAGGTGATGATG
TGAGTAAGTGTGCTGTTTGTGGTAAAACATTTACTGAAGCAAGCGAACTG
GTAAATCATTATCAGTTACACAAGAAACTTGAATCTCAAGAAGAAAGTAG
TGAATCACAACCTGAGGAAAATGTTTCAGATGCTCCTCCCGAGGTTCATG
AATGCGCTgtgtgtggtaaaacattttcagaaTCACGTGACTTGGTAAAA
CATTACCAATTACATCGGGCTAACAAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000094_pilon | genome | sc0000094_pilon:484922..491982 + |
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