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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000094_pilon:472143..475217+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12454.1.p1 ID=MSTRG.12454.1.p1|Name=MSTRG.12454.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3075bp|location=Sequence derived from alignment at sc0000094_pilon:472143..475217+ (Clytia hemisphaerica_ch_hm2_pilon)
CTGCAAATCTAATTATAACAAAAGTAAAGCGttgcaaaatgaaaatatac
gAATCAggaatgaagaaaaattagCCGATTTTCGTAAAATTCCAATGTAT
GGTTTCCCAAGCAAGAAGAAAAGACTCTATGAAAGGCAGCGCTGGATCAA
ATCCATTCCGTACCTTACCGAAGAGATCGTCAATAATAACAATACACCAG
CGGTTTGCCGTAAACATTGGCCAGAAAACGCTACTTTTGAAACAGGTGTG
TAACCTTATTGCTTTCGTGGAATATTTGAACAAGCTTAAGTCTTCGGATG
AGTTTTTCTCTGTTCATAGCTTATCTATTAACATATTTTCGATATTATAA
AAAATCCAAATCTGAtgcttgtttttgttgaaaatttgtatttatAATTC
ACTCATAGGCGGCCCATAAGATACAAATCTACAACACAAAGTTCAATTAA
CTCTTAAACGCTatgtttatttctttctttaggTCAGAACGGCCTTCCTC
GACCAATCGAACCaccatcaatctttgataatataCCGTCCAGTTCCATT
CCAACACCTCTTCCACCTCCAAGACCAACAAAACGCACGTCTTTCGAAAC
TCGCAGCCAGCAGGAGGATGAGATGGAAGAGTTTAGAAATCGCGACAAAC
TAAAATTTGAGGACATCGCCAACTCCGATCGATTGACATTACTCGGTTTG
CCTATCGTCGCATTTCAAGTCGATGGTGAACAGTGGATTCAATATATCAG
GAATACCATCATTTTCGCTGAAAATATCGAAAGATTTGAGATTCATTGCG
TACAAAATGGGTGTTCAATGTACCATAAAATCCCTTTCGAAAAATCGTAT
CACTCATCTCGATTCATGGTCGTGTCTTGAGGAAgcactttgctttttga
aaaatagtgaATTCACTCGGCATCAAAccattttacaagaacaaatagaA
TCTATGAAACCACCTCAAGTCGGaaaaaaaaCTCTATTCTCCGCAAGTAC
TGATGCGAGCATTCGGCTACTTTTCTCAATCTCGTTCACTCTACTCAAGG
CTCCGATCCGATTTCAAACTCCCCTCAATCAAGACGCTAACCAACATCTC
GTCCAAAGTCAACAACACATCCGACAGGACATTTATCAACGAAATCATCA
AAGCTGTAAAACCTGACCAGAGAAAGTGTATAGTCATGGCAGACGAAGTG
TATGTAAAACAGTGCCTACTCTATCATGGTGGAACCGTCTTTGGTCAGGC
AGAAAACAACCCATCCAGTTTAGCAACTTCCGTACTCGGAATTATGGTGA
AATGCTTATTCGGCGGTCCAacgtttttattcaaaatgattCCTGTGAAA
GCTATGACTGCTGCTTTTTTGTTCGATCAAATTCAGCAAACTATTGCTCT
GTTGCGTGGCGCTGGTGCCGATATCAAATCAATAATCGTCGATGGAAATC
GAACGAACCAGAATTTCTTCAAGCAGTTTGATACGGTCAAAGACAAACCC
TGGTTGACAACTGATGGTATTTTCCTTCTGTTCGATTTTGTTCACCTGAT
TAAAAGTATTCGAAATAATTGGTTAACAGAGAAGACTGGCCAACTCACAT
TCAAAGAAAATGATGATACATTTATTGCCAAGTGGTCTGACCTTATCCGA
TTACACGAAGTTGAAAACATGTCAAACTTCTGCGGAGTTCGTGGCTTATC
AAAGTTGACCGAAGTCGCCGTACGCCCCAAACCGGTCGAACGGCAACGTG
TATCGACATGTCTCCGTGTTTTTTGTGAAGAGACGTTAGCAGCACTTAAA
GTTCACCCACAGATGCAAAACATGAATGTCACCGGCACTGTCAAATTCAT
CGAAAAAGTCAACACTATGTGGAAGATCTTAAATGTTCGAACCGTTGGGA
AAGACATCCGACACAACAACCCTTTAGAAGCCGTTATCAACTCTCCTCAA
GATTCTCGTTTGCAACAACTCATTGATTATGCTGATTGGTTTCTCTCAAT
CGGaaaaaaaTCGGGAGGAAAGCGCATGAAAACATTGACTAAAGATACAT
CAAATGCACTCCACCATACTCTAAATGGTCTTGTGGAGCTGACGAAACAT
CTTCTTATGTCACCTCACCAAAAATATGTTATGATTGGAGAATTTTGCTC
AGATCCATTGGAAAAAGAATTTGGAAAGCTGAGACAAGGTTCCGGAGGTG
AGAacactttttaatttcttcTAATTGAAATGAGGTCTTCATTTCAAACA
TTGTTAATCATTTTACGGCTTGAATTGTTTACCCATGTAATTATTAATTC
GCGATGCGTTTTTCGATTACTTACAAGTTTACaccgaaaattcaaaattt
tccttttatctTTATCTACAGGAAGGTATTTTATCACTGCTCAACAAGTA
CTCGAAAAACTCGATATCAAGAAAACCAAACTTTTGCTAAAGTTGAATGT
CGACCTGTCCGTTTTACGAGCTGAACCGGGTCATTGTTGTGACAAGTGtt
tttttGCTCTTGATCGTGATGGAATAAGTTTGCTCAACCAGTTAGAAGAG
GAAGAGATGTCCATCCCGGTCGAAACGAAAATGTCTCTTATATATATGGC
CGGTTACGTAGCTCGTAAAGATGAGATGAGTGAGCAGGAGTTATTCGATG
CTACGATGTTTTACGCTCAAAAGTACGGGAAATATCTTCACGAGCTTGAC
CGTGGTGGTTTGAAAATTCCGACTGATACGATTTGTCAATGGACGATGTT
TTCATACATAATGTTCAATCATATCCGACATCTCGTCTGCCGAACATCAC
TGTCTGATGTCTTGATGTCTATCGCTCACACATACGCTTTTGACTCTATC
ACTAAAAATAATGCTATGATATTATCGAACATCTTTCTGAACAATTTCTA
CAAATCGCAGACGCCTCGCTCCTCGAAGGAAGCGAGCCAGAAAGTTCtaa
agctaaaagaaaaatgaaacatcttTTTCTATCATCACACTCTGAGTGCA
TCCAGttctttcaattttctatagtttatttttttaaataaagtgtTCAG
ATTTCATTGTACTTAGGATATCGTA Coding sequence (CDS) from alignment at sc0000094_pilon:472143..475217+ >MSTRG.12454.1.p1 ID=MSTRG.12454.1.p1|Name=MSTRG.12454.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3582bp|location=Sequence derived from alignment at sc0000094_pilon:472143..475217+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGAGCATTCGGCTACTTTTCTCAATCTCGTTCACTCTACTCAAGGCT
CCGATCCGATTTCAAACTCCCCTCAATCAAGACGCTAACCAACATCTCGT
CCAAAGTCAACAACACATCCGACAGGACATTTATCAACGAAATCATCAAA
GCTGTAAAACCTGACCAGAGAAAGTGTATAGTCATGGCAGACGAAGTGTA
TGTAAAACAGTGCCTACTCTATCATGGTGGAACCGTCTTTGGTCAGGCAG
AAAACAACCCATCCAGTTTAGCAACTTCCGTACTCGGAATTATGGTGAAA
TGCTTATTCGGCGGTCCAacgtttttattcaaaatgattCCTGTGAAAGC
TATGACTGCTGCTTTTTTGTTCGATCAAATTCAGCAAACTATTGCTCTGT
TGCGTGGCGCTGGTGCCGATATCAAATCAATAATCGTCGATGGAAATCGA
ACGAACCAGAATTTCTTCAAGCAGTTTGATACGGTCAAAGACAAACCCTG
GTTGACAACTGATGGTATTTTCCTTCTGTTCGATTTTGTTCACCTGATTA
AAAGTATTCGAAATAATTGGTTAACAGAGAAGACTGGCCAACTCACATTC
AAAGAAAATGATGATACATTTATTGCCAAGTGGTCTGACCTTATCCGATT
ACACGAAGTTGAAAACATGTCAAACTTCTGCGGAGTTCGTGGCTTATCAA
AGTTGACCGAAGTCGCCGTACGCCCCAAACCGGTCGAACGGCAACGTGTA
TCGACATGTCTCCGTGTTTTTTGTGAAGAGACGTTAGCAGCACTTAAAGT
TCACCCACAGATGCAAAACATGAATGTCACCGGCACTGTCAAATTCATCG
AAAAAGTCAACACTATGTGGAAGATCTTAAATGTTCGAACCGTTGGGAAA
GACATCCGACACAACAACCCTTTAGAAGCCGTTATCAACTCTCCTCAAGA
TTCTCGTTTGCAACAACTCATTGATTATGCTGATTGGTTTCTCTCAATCG
GaaaaaaaTCGGGAGGAAAGCGCATGAAAACATTGACTAAAGATACATCA
AATGCACTCCACCATACTCTAAATGGTCTTGTGGAGCTGACGAAACATCT
TCTTATGTCACCTCACCAAAAATATGTTATGATTGGAGAATTTTGCTCAG
ATCCATTGGAAAAAGAATTTGGAAAGCTGAGACAAGGTTCCGGAGGAAGG
TATTTTATCACTGCTCAACAAGTACTCGAAAAACTCGATATCAAGAAAAC
CAAACTTTTGCTAAAGTTGAATGTCGACCTGTCCGTTTTACGAGCTGAAC
CGGGTCATTGTTGTGACAAGTGtttttttGCTCTTGATCGTGATGGAATA
AGTTTGCTCAACCAGTTAGAAGAGGAAGAGATGTCCATCCCGGTCGAAAC
GAAAATGTCTCTTATATATATGGCCGGTTACGTAGCTCGTAAAGATGAGA
TGAGTGAGCAGGAGTTATTCGATGCTACGATGTTTTACGCTCAAAAGTAC
GGGAAATATCTTCACGAGCTTGACCGTGGTGGTTTGAAAATTCCGACTGA
TACGATTTGTCAATGGACGATGTTTTCATACATAATGTTCAATCATATCC
GACATCTCGTCTGCCGAACATCACTGTCTGATGTCTTGATGTCTATCGCT
CACACATACGCTTTTGACTCTATCACTAAAAATAATGCTATGATATTATC
GAACATCTTTCTGAACAATTTCTACAAATCGCAGACGCCTCGCTCCTCGA
AGGAAGCGAGCCAGAAAGTTCtaaagctaaaagaaaaatgaATGCGAGCA
TTCGGCTACTTTTCTCAATCTCGTTCACTCTACTCAAGGCTCCGATCCGA
TTTCAAACTCCCCTCAATCAAGACGCTAACCAACATCTCGTCCAAAGTCA
ACAACACATCCGACAGGACATTTATCAACGAAATCATCAAAGCTGTAAAA
CCTGACCAGAGAAAGTGTATAGTCATGGCAGACGAAGTGTATGTAAAACA
GTGCCTACTCTATCATGGTGGAACCGTCTTTGGTCAGGCAGAAAACAACC
CATCCAGTTTAGCAACTTCCGTACTCGGAATTATGGTGAAATGCTTATTC
GGCGGTCCAacgtttttattcaaaatgattCCTGTGAAAGCTATGACTGC
TGCTTTTTTGTTCGATCAAATTCAGCAAACTATTGCTCTGTTGCGTGGCG
CTGGTGCCGATATCAAATCAATAATCGTCGATGGAAATCGAACGAACCAG
AATTTCTTCAAGCAGTTTGATACGGTCAAAGACAAACCCTGGTTGACAAC
TGATGGTATTTTCCTTCTGTTCGATTTTGTTCACCTGATTAAAAGTATTC
GAAATAATTGGTTAACAGAGAAGACTGGCCAACTCACATTCAAAGAAAAT
GATGATACATTTATTGCCAAGTGGTCTGACCTTATCCGATTACACGAAGT
TGAAAACATGTCAAACTTCTGCGGAGTTCGTGGCTTATCAAAGTTGACCG
AAGTCGCCGTACGCCCCAAACCGGTCGAACGGCAACGTGTATCGACATGT
CTCCGTGTTTTTTGTGAAGAGACGTTAGCAGCACTTAAAGTTCACCCACA
GATGCAAAACATGAATGTCACCGGCACTGTCAAATTCATCGAAAAAGTCA
ACACTATGTGGAAGATCTTAAATGTTCGAACCGTTGGGAAAGACATCCGA
CACAACAACCCTTTAGAAGCCGTTATCAACTCTCCTCAAGATTCTCGTTT
GCAACAACTCATTGATTATGCTGATTGGTTTCTCTCAATCGGaaaaaaaT
CGGGAGGAAAGCGCATGAAAACATTGACTAAAGATACATCAAATGCACTC
CACCATACTCTAAATGGTCTTGTGGAGCTGACGAAACATCTTCTTATGTC
ACCTCACCAAAAATATGTTATGATTGGAGAATTTTGCTCAGATCCATTGG
AAAAAGAATTTGGAAAGCTGAGACAAGGTTCCGGAGGAAGGTATTTTATC
ACTGCTCAACAAGTACTCGAAAAACTCGATATCAAGAAAACCAAACTTTT
GCTAAAGTTGAATGTCGACCTGTCCGTTTTACGAGCTGAACCGGGTCATT
GTTGTGACAAGTGtttttttGCTCTTGATCGTGATGGAATAAGTTTGCTC
AACCAGTTAGAAGAGGAAGAGATGTCCATCCCGGTCGAAACGAAAATGTC
TCTTATATATATGGCCGGTTACGTAGCTCGTAAAGATGAGATGAGTGAGC
AGGAGTTATTCGATGCTACGATGTTTTACGCTCAAAAGTACGGGAAATAT
CTTCACGAGCTTGACCGTGGTGGTTTGAAAATTCCGACTGATACGATTTG
TCAATGGACGATGTTTTCATACATAATGTTCAATCATATCCGACATCTCG
TCTGCCGAACATCACTGTCTGATGTCTTGATGTCTATCGCTCACACATAC
GCTTTTGACTCTATCACTAAAAATAATGCTATGATATTATCGAACATCTT
TCTGAACAATTTCTACAAATCGCAGACGCCTCGCTCCTCGAAGGAAGCGA
GCCAGAAAGTTCtaaagctaaaagaaaaatga
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000094_pilon | genome | sc0000094_pilon:472143..475217 + |
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