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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:722511..727715+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1244.1.p1 ID=MSTRG.1244.1.p1|Name=MSTRG.1244.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5205bp|location=Sequence derived from alignment at sc0000006_pilon:722511..727715+ (Clytia hemisphaerica_ch_hm2_pilon)
TGAACGTCTTCATCTTCTGAAAGAAAAAGGATATTGTATCCAATGTCTCT
ACCCGGGTGCAGATTCGTCAAAAGGGAAACACAAAAAGGGGAAATGCCAG
AAAGAATTTGTCTGTCCAAACTCCGCTCATGAAAGATATACATCCCAAAA
ACACGTTCTTTTGTGTGACGAACATAAACATGAACCCGAAAATGAGGAAA
TTCTCGTCTTGTTCAAGTCCCGATACATATCCCGGAATACCAATCTGCCG
GAATTCTCCCAGAACATCAAGCTTGCGTTTATGGCTAATACAAACTTCCA
TGCAAAGCCGAGCAATCGCCTCCGCCGCAGCTACCGCAGTGCGGACAAAT
GCGAGAATATCCTCGATCGAGGAATCTATATGTTGCAAGAAATTACCGTG
AATTCCCAACCATTCACGATATTTTATGATACCGGTTGCAGCGATTTCAT
TGTTACGCGAGATGCCGCTAACCGCTTGGGTCCCCATGCGATCCCTGAAT
GCAGCGATCCGATTACTATCTCTGGGGTCGGAGACAAAACCGTTCAAACA
TCCGGTTCTTACGGGGTCCGATTACCGCTTTATGACGGATCCAATGTAAT
CCTTACCGGATCGTGTCTCGACAAAATCGCAACACCGTTTACCATCTATG
ATCTTACCACAGCTTCAAGTGATCTGATTACCGCTGCTGCTGATGAAGCA
GACCGCTTACCGAAACTTCCTTCGTCTGTGGGAGGGAAAATCGATATGAT
GATTGGGATACGCTATCTCAAGTACCATCCACGAATTATCTTCCAACTCT
ATACGGGTTTAACAATATACGAGTCTGTTTTCCAAGGCTCCGACGGATCT
AGAGGCGTCGTCGGTGGCCCTCACCCATCATTCTCGATCCACAGTAACTT
CTACTCCTCTGAAGTGAATCTTAACCATGATCTACAATCTTCTGATGATG
AGGAACCTCACTCCACATTCTTCTCCAATCCTTTGAAGTCTTTCAATCAG
GCTGAAACCATCGGTAGTGAAATCTCATACCGTTGTCCGACATGTCGTGA
ATGTAAGGATTGTAAAAACCATGACTCTACCGAAGCCATTAGTATCAGGG
AGGATGCTGAGCAAACCATTATTAATTCTTCTGTTCATGTAGACCTTGCA
AATAAAGTCACAACAGCAAGGCTCCCATTCATTTGTGATCCAACCGAAAA
GTTGTTACCTAACAAGTCGATTGCACTGAAAGTATACCAGCAACAGCTTC
GAAAGCTGAACAAGCCAGAAAATGCTAATGACAAACAAGACATCATCCAA
TCTGAAGCAAAGCTCCATACAATGGGATTTGTGGATTACGTTTCAAATCT
TCCACCAGATATCCAAGAGATGCTACATTTTCAACCGATTCAAAACTACA
TTCCATGGCGAGCTGTGTGGAAACCCAGTTCGTTAAGCACACCTTGCAGA
ATCGTATTTGACGCTTCTCAGAACACACCTTCCGGTCATAGTCTAAATGA
TTGCCTTGCAAAGGGACGAAATGGTTTGAACCATCTTCAGGAGATACTCA
TTCGTTGGTCCATCCACAAAGTCGCTATCCACTCAGATGTACGTAAAATG
TACAATACCATCAAGCTAGATTCAAAGGACTGGTGCTTCCAAAGATATGT
ATGGCAACAGGACCTAGATCCGACAAAAATACCTGAACAGAAGGTCATTC
AAACGTTAATCTACGGCGTCAAACCCTCCGGTAATCAAGCAGAGTTCGCT
CTTCGTGAAGTAGCAAGGTTGCACTCAGACGAGTATCCAGAAGTGTCTCG
GATTCTTCATCAGGATGTCTATGTTGATGACTGCGTTACAGGTGAGGAGT
CCATGGAGAAAGCAGTCCAAAGATCCAAGGAGCTTGAACATGTCGTCAAC
CAAGGAGGATTTCAGCTCAAAGGAATCACACTTTCTGGTAAGAGACCAGA
TAAAGCACTCAGTGATGACAACGAATCGGTCATCGTTGCTGGATTCAAAT
GGCTGCCAGATGAAGATGTCTTATCACTCAATCTTGGTAACCTCAATTTT
GCCAAGAAACGTCGAGGGAAGAAACCTGATCAAGCAAACAACATCATCCC
AAGTGTACTCACTCGTCGTCACTGCACCTCCAAAGTGGGAGAAGTTTACG
ACATCCTCGGAAAAGTCACTCCACTCACAGCTGCCATGAAAATAGATCTT
CATGACCTTGTCATACGAGGATTAAACTGGGACGACCCCATCCCCAATGA
TCTAAAAGCTTTGTGGACCAATCACTTTGAGATGATGCAAGAGATCAAAC
ATCTGCAATTCAAAAGAGCTATCATCCCAGATGATGCCGAAAGCCTTGAC
ATTTCAACCATTGACACTGCTGATGCCAGCCCATATCTCGCTTGTGTAGC
CATCTATGCAAGATTTAAACGAAAATGTGGAGGTTATTCATGCCAACTTG
TTCTTGGTCGTTCAAGGATCGTCCATGATCGAATGACACAACCACGTGCA
GAGCTTTTCGCAGCAGTCCTCAATGCACATTCAGGAGAGATCGTCCGACG
TTCTTTCCACAGTTGGCACACCTCATCTCTCAAGCTTTCAGATAGTCAAA
TTGCTCTCTATTGGCTATCCAACGACGAGAAACCTTTGAAACAATGGGTT
AGAAATCGATCCATTGAAATCAGAAGATTTTCCCGACCCGATCAATGGCA
CTACGTGTCCTCCAAATGTATGCCCGCTGACATCGGTACACGAAAAGGAG
CAACATTAGATGATGTGAAGCAAGACTCAACATGGATTCAAGGATTTGAT
TGGATGAAGATGGATACTTCAAAATTTCCAATGAAGTcaatcaaagaatt
gaagctatcTTCTGAAGAGCTGACTGAAGTCCAAAAGGAAACATCCATCA
ATCAAGAATCCTTCCTGACCATCAATAGAAAACTAGTCCCAGCCGAAGTG
GCAGACAGATATGCATTCTCTGGGTACCTCATTGATCCTAACAGTCACTC
ATTTTCAAAGGTCATCCGCATCATGTCTTACGTCTTCAAGTTCTTGAGCA
ATATTCGAAAGAAAGTCACAATTCGTCCAAAGTCTTTACCTGTTGTTGTT
CATATTCCTTTGACAGACGAAGAACTCAAACAAGGAGCCAACTATTTCTT
TCGCAAGTGTACAGCTGAGATCAAGCAATTTCTACCCAAGACAAAATACC
AAAACATCTCCAAAGAAGTAGATGGCATCCTGATGTACACAGGTAGAATC
CTACCGACCAATGAAATAACGTGCACTGGAAAGTTCACCAAAGCAATGAA
AGACCTTTCGTCAACCACCTTTTGTGTTCCAGTAGTCGACAAGAACTCAC
CTGTTTCATACAGTATCATTAATGACATCCACTGGAATCATCCCTCTGTA
ATGCATTGTGGTGTCGAAACAACTTGGAGACACACCCTGAAGGTTGCATT
TATCATTGAAGGTAGAGCACTTGTCAAAATAATTCGCAAATCGTGTGAAC
GTTGTCGTTACCTTATCAAGAAGACCATTGCTGTCGAAATGGGACCCATC
TCAAATCATAACCTAATGATTGCACCAGCCTTCTACATTACACAAGTTGA
TCTCTCTGGTCCCTACAAAGCTTATTCACCACATAACAAGAGGTCAACCA
TCAAAGTTTGGCTGATCATATTCTGTTGTTGCACCACTTCAACAACATCC
ATCAAATGCATGGACAACTACGGTACAACATCCTTTCTGCAAGCATTCGT
TCGATTGGCATCTGAAGTTGGATTTCCGAAGACTGTGCTCTGCGATGAAG
GAAGTCAACTCGTGAAGGGATGTGATGACATGAAGATATCATTCACAGAC
CTCGCCAACAAACTCTACAGAGATGTGAACGTCAATTTCGAAGTTTGCCC
AGTTGGTGGGCATAATATGCACGGCAAGgtcgaaagaaaaatcaaagaag
tcAATGCTTCAATCTCAAAGATCGCTTCGAATGAGAAATTATCGTTGATG
CAATGGGAAACAATCGGTGCCAAGATCTCAAACTCCATCAATAATTTGCC
ACTCGCATTGGGAAGCATCACCAGTGATTTTGAGACAATGGACCTTATCA
CACCCAACCGCTTGAAATTGGGTAGGAACAACGAACGCAGCCCTGTTGGT
AAGATGATTATCACCAACAAACCAGACAAGATCATCGTGGAAAATTCTCG
TATCTTTGAAGCATGGTTCGAAAATTGGCTTCAAAACCATGTACCCAAAT
TGATGGATcaaccaaaatggttttcaaCGGAAGACATCAGCAAAGGAGAC
GTTGTACTCTTTCTAAAAAGCGAATCGAAGCTATCGAATACTTATCAATT
TGGAATCGTGGAGAACCTTGAACCTACCGATAGTGATGGAATCATTCGTA
AGGTCGACGTGAAGTATAGGAACAGCAACGAGAACGTGTTTCGAGTGACG
AGAAGAGCTGTTCGTTCATTGGTCAAAATCAAGTCCGTTGACGAGGGCGA
TATTGTTACCGAGCTCGGTCAAATGGCTTGTATTGTTAACAAAATTGGTT
AATTGACTTTGGTGGGGAGTGTGAAATGATTATATCTTTTCATTAAAGTA
ATTATCGATTTTATTACGCTctaaatttgttttcattttatgtttagcaa
ttatgacgtcatctcaGTTTAGTATCATTTTTATGTCTCTAGGGtaatta
tatattttgataaaagcgATGTGCAGTGAAACTTTCTTGCTCAATGAAAT
CAGTTTTTAATAAGAGACGTATGAGAAAggttgtgtgtgtgtgtttacAC
GTTTCAAAACGCCTTTTCAACTCCAGGAAACTTGGTCGCCAAAGTTATGC
TTGGTAAAGCATAATTCAAGTTTCCATCATTAACAACAACTCTGGTTGTG
CATGCTGGTAAGCTTCTATTCTTTGTTTGTTTCTCTGCTTTTTGCTTGTG
TCCTTTCACTGCACTGCTTAGCcttttttaagttagttttgtctgtttta
tcttaatcaatttttccttaagtccttaattttctatgtttatagTTCAA
TTTTCTAGCATTCAGTAGTCTATGTTCATAGCCTAGCATTTCATCCATTT
TGatagttttcttttgtattcaatttttagtttgaactaCCTGCAAAGAT
CGTTCCAAACAGGCACATTTTTTGTTGTACTCCCGTCGCCCTTCTCAGAC
cacac Coding sequence (CDS) from alignment at sc0000006_pilon:722511..727715+ >MSTRG.1244.1.p1 ID=MSTRG.1244.1.p1|Name=MSTRG.1244.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4551bp|location=Sequence derived from alignment at sc0000006_pilon:722511..727715+ (Clytia hemisphaerica_ch_hm2_pilon)
GAACGTCTTCATCTTCTGAAAGAAAAAGGATATTGTATCCAATGTCTCTA
CCCGGGTGCAGATTCGTCAAAAGGGAAACACAAAAAGGGGAAATGCCAGA
AAGAATTTGTCTGTCCAAACTCCGCTCATGAAAGATATACATCCCAAAAA
CACGTTCTTTTGTGTGACGAACATAAACATGAACCCGAAAATGAGGAAAT
TCTCGTCTTGTTCAAGTCCCGATACATATCCCGGAATACCAATCTGCCGG
AATTCTCCCAGAACATCAAGCTTGCGTTTATGGCTAATACAAACTTCCAT
GCAAAGCCGAGCAATCGCCTCCGCCGCAGCTACCGCAGTGCGGACAAATG
CGAGAATATCCTCGATCGAGGAATCTATATGTTGCAAGAAATTACCGTGA
ATTCCCAACCATTCACGATATTTTATGATACCGGTTGCAGCGATTTCATT
GTTACGCGAGATGCCGCTAACCGCTTGGGTCCCCATGCGATCCCTGAATG
CAGCGATCCGATTACTATCTCTGGGGTCGGAGACAAAACCGTTCAAACAT
CCGGTTCTTACGGGGTCCGATTACCGCTTTATGACGGATCCAATGTAATC
CTTACCGGATCGTGTCTCGACAAAATCGCAACACCGTTTACCATCTATGA
TCTTACCACAGCTTCAAGTGATCTGATTACCGCTGCTGCTGATGAAGCAG
ACCGCTTACCGAAACTTCCTTCGTCTGTGGGAGGGAAAATCGATATGATG
ATTGGGATACGCTATCTCAAGTACCATCCACGAATTATCTTCCAACTCTA
TACGGGTTTAACAATATACGAGTCTGTTTTCCAAGGCTCCGACGGATCTA
GAGGCGTCGTCGGTGGCCCTCACCCATCATTCTCGATCCACAGTAACTTC
TACTCCTCTGAAGTGAATCTTAACCATGATCTACAATCTTCTGATGATGA
GGAACCTCACTCCACATTCTTCTCCAATCCTTTGAAGTCTTTCAATCAGG
CTGAAACCATCGGTAGTGAAATCTCATACCGTTGTCCGACATGTCGTGAA
TGTAAGGATTGTAAAAACCATGACTCTACCGAAGCCATTAGTATCAGGGA
GGATGCTGAGCAAACCATTATTAATTCTTCTGTTCATGTAGACCTTGCAA
ATAAAGTCACAACAGCAAGGCTCCCATTCATTTGTGATCCAACCGAAAAG
TTGTTACCTAACAAGTCGATTGCACTGAAAGTATACCAGCAACAGCTTCG
AAAGCTGAACAAGCCAGAAAATGCTAATGACAAACAAGACATCATCCAAT
CTGAAGCAAAGCTCCATACAATGGGATTTGTGGATTACGTTTCAAATCTT
CCACCAGATATCCAAGAGATGCTACATTTTCAACCGATTCAAAACTACAT
TCCATGGCGAGCTGTGTGGAAACCCAGTTCGTTAAGCACACCTTGCAGAA
TCGTATTTGACGCTTCTCAGAACACACCTTCCGGTCATAGTCTAAATGAT
TGCCTTGCAAAGGGACGAAATGGTTTGAACCATCTTCAGGAGATACTCAT
TCGTTGGTCCATCCACAAAGTCGCTATCCACTCAGATGTACGTAAAATGT
ACAATACCATCAAGCTAGATTCAAAGGACTGGTGCTTCCAAAGATATGTA
TGGCAACAGGACCTAGATCCGACAAAAATACCTGAACAGAAGGTCATTCA
AACGTTAATCTACGGCGTCAAACCCTCCGGTAATCAAGCAGAGTTCGCTC
TTCGTGAAGTAGCAAGGTTGCACTCAGACGAGTATCCAGAAGTGTCTCGG
ATTCTTCATCAGGATGTCTATGTTGATGACTGCGTTACAGGTGAGGAGTC
CATGGAGAAAGCAGTCCAAAGATCCAAGGAGCTTGAACATGTCGTCAACC
AAGGAGGATTTCAGCTCAAAGGAATCACACTTTCTGGTAAGAGACCAGAT
AAAGCACTCAGTGATGACAACGAATCGGTCATCGTTGCTGGATTCAAATG
GCTGCCAGATGAAGATGTCTTATCACTCAATCTTGGTAACCTCAATTTTG
CCAAGAAACGTCGAGGGAAGAAACCTGATCAAGCAAACAACATCATCCCA
AGTGTACTCACTCGTCGTCACTGCACCTCCAAAGTGGGAGAAGTTTACGA
CATCCTCGGAAAAGTCACTCCACTCACAGCTGCCATGAAAATAGATCTTC
ATGACCTTGTCATACGAGGATTAAACTGGGACGACCCCATCCCCAATGAT
CTAAAAGCTTTGTGGACCAATCACTTTGAGATGATGCAAGAGATCAAACA
TCTGCAATTCAAAAGAGCTATCATCCCAGATGATGCCGAAAGCCTTGACA
TTTCAACCATTGACACTGCTGATGCCAGCCCATATCTCGCTTGTGTAGCC
ATCTATGCAAGATTTAAACGAAAATGTGGAGGTTATTCATGCCAACTTGT
TCTTGGTCGTTCAAGGATCGTCCATGATCGAATGACACAACCACGTGCAG
AGCTTTTCGCAGCAGTCCTCAATGCACATTCAGGAGAGATCGTCCGACGT
TCTTTCCACAGTTGGCACACCTCATCTCTCAAGCTTTCAGATAGTCAAAT
TGCTCTCTATTGGCTATCCAACGACGAGAAACCTTTGAAACAATGGGTTA
GAAATCGATCCATTGAAATCAGAAGATTTTCCCGACCCGATCAATGGCAC
TACGTGTCCTCCAAATGTATGCCCGCTGACATCGGTACACGAAAAGGAGC
AACATTAGATGATGTGAAGCAAGACTCAACATGGATTCAAGGATTTGATT
GGATGAAGATGGATACTTCAAAATTTCCAATGAAGTcaatcaaagaattg
aagctatcTTCTGAAGAGCTGACTGAAGTCCAAAAGGAAACATCCATCAA
TCAAGAATCCTTCCTGACCATCAATAGAAAACTAGTCCCAGCCGAAGTGG
CAGACAGATATGCATTCTCTGGGTACCTCATTGATCCTAACAGTCACTCA
TTTTCAAAGGTCATCCGCATCATGTCTTACGTCTTCAAGTTCTTGAGCAA
TATTCGAAAGAAAGTCACAATTCGTCCAAAGTCTTTACCTGTTGTTGTTC
ATATTCCTTTGACAGACGAAGAACTCAAACAAGGAGCCAACTATTTCTTT
CGCAAGTGTACAGCTGAGATCAAGCAATTTCTACCCAAGACAAAATACCA
AAACATCTCCAAAGAAGTAGATGGCATCCTGATGTACACAGGTAGAATCC
TACCGACCAATGAAATAACGTGCACTGGAAAGTTCACCAAAGCAATGAAA
GACCTTTCGTCAACCACCTTTTGTGTTCCAGTAGTCGACAAGAACTCACC
TGTTTCATACAGTATCATTAATGACATCCACTGGAATCATCCCTCTGTAA
TGCATTGTGGTGTCGAAACAACTTGGAGACACACCCTGAAGGTTGCATTT
ATCATTGAAGGTAGAGCACTTGTCAAAATAATTCGCAAATCGTGTGAACG
TTGTCGTTACCTTATCAAGAAGACCATTGCTGTCGAAATGGGACCCATCT
CAAATCATAACCTAATGATTGCACCAGCCTTCTACATTACACAAGTTGAT
CTCTCTGGTCCCTACAAAGCTTATTCACCACATAACAAGAGGTCAACCAT
CAAAGTTTGGCTGATCATATTCTGTTGTTGCACCACTTCAACAACATCCA
TCAAATGCATGGACAACTACGGTACAACATCCTTTCTGCAAGCATTCGTT
CGATTGGCATCTGAAGTTGGATTTCCGAAGACTGTGCTCTGCGATGAAGG
AAGTCAACTCGTGAAGGGATGTGATGACATGAAGATATCATTCACAGACC
TCGCCAACAAACTCTACAGAGATGTGAACGTCAATTTCGAAGTTTGCCCA
GTTGGTGGGCATAATATGCACGGCAAGgtcgaaagaaaaatcaaagaagt
cAATGCTTCAATCTCAAAGATCGCTTCGAATGAGAAATTATCGTTGATGC
AATGGGAAACAATCGGTGCCAAGATCTCAAACTCCATCAATAATTTGCCA
CTCGCATTGGGAAGCATCACCAGTGATTTTGAGACAATGGACCTTATCAC
ACCCAACCGCTTGAAATTGGGTAGGAACAACGAACGCAGCCCTGTTGGTA
AGATGATTATCACCAACAAACCAGACAAGATCATCGTGGAAAATTCTCGT
ATCTTTGAAGCATGGTTCGAAAATTGGCTTCAAAACCATGTACCCAAATT
GATGGATcaaccaaaatggttttcaaCGGAAGACATCAGCAAAGGAGACG
TTGTACTCTTTCTAAAAAGCGAATCGAAGCTATCGAATACTTATCAATTT
GGAATCGTGGAGAACCTTGAACCTACCGATAGTGATGGAATCATTCGTAA
GGTCGACGTGAAGTATAGGAACAGCAACGAGAACGTGTTTCGAGTGACGA
GAAGAGCTGTTCGTTCATTGGTCAAAATCAAGTCCGTTGACGAGGGCGAT
ATTGTTACCGAGCTCGGTCAAATGGCTTGTATTGTTAACAAAATTGGTTA
A
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:722511..727715 + |
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