MSTRG.12438.1.p1 (mRNA) -

Overview
NameMSTRG.12438.1.p1
Unique NameMSTRG.12438.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000094_pilon:152002..154317-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12438.1.p1 ID=MSTRG.12438.1.p1|Name=MSTRG.12438.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2316bp|location=Sequence derived from alignment at sc0000094_pilon:152002..154317- (Clytia hemisphaerica_ch_hm2_pilon)
ATTGTACATTGTATTTTTCACATAAGAAATTAGAACAGAAATATTACATA
ATCATTTTAAGGATTCATTAAAAGTGAGTCGCTGTTTGCTTTTACATTCC
TCACTTTTGAAGGAGGTCGAAACGTAAAAATAAAGCCCCAACCATTGAAG
ACTTCAATCCCTTAATCAATATTTGATAAAACGTAAAAAATGCTTCATCG
AACTTGATTTACACGTACTTGACAACTGTTATAGTTTCATAGCAAGCAGT
ACTTACAATATCATTAGTTTGATTTTCGAGGGTCTCATCACATCACAAAC
AAGTTTAGGGTAATCTGTCAAATTTACGTGAAAAAAACTTCCAGAAGTAT
GCGTTACTTGGTTTTTATTTCGATTTCTTTGGTGTTTGTTGTTATGGAAA
CCGATTGTTTACTTTGTGATCCCATGCCAAAATGCACGGATTTCGAATGC
TTTGATCACGAGCCAGAATGTGGAGAAGGTAAGGAAAAACCTGTAAATAT
CCTCCCTTTTTATAAAGAAACTGTAATCTGGGAGCTCGGCTGTTGTTATT
TTAGACCCTTGAAACCTCAAATTGTGTTCTTTATTTCAGTTAGTTTTTAT
GAAAATTTTTACTACTTTGAGTTTTTACAAGCTCTTATTTGATTTGGTTG
GTTGTTAACCAGTAATAAAAAGATTTTGTTACTTTTTCTAAAGAACGCTT
CATTTTTATTAATTCAAATGACCAATTATTAAAGTATCTTATAAAAACTC
CATCTCATCTGAAATTCTGACATAACTTTTTCAAACAGTACGTTTTCATA
TTTCGTATTGTCGAGGCTAGTTGTTTGCTGTTCAACAGATCTGACAGAGA
TCCTTTTTTTCTTCAGGAGGTGTTGTTTCAAAGACATTGACTTGTGGATG
TTGTTTAGAATGTGCCAAACAGGTGAATGAAGAATGTGGTGGACCTTATC
ATTATTATGGGAGGTGTGACCATGCGTTGGTTTGTGTTCCTAAACTGGCT
GTTCGAGATCGATACCCTGTCGGTGTATGCAAATCTAAGTGAGTGACCAC
TAAACCTTTTTTGGGTTAACTCAAACTTATAGCTCGTGATTGTATCACGT
CCATCAGTAAAATCAAAAAGTGGTGCTGGGTATGAGATTGATTTATTGGA
CAAATCACGTAGTTTTAATTCACGTTTAATGTATTTTCGTACTATAATCA
TTGTTGCGCATAAATTAATTAATACTAAATCAAATTCATATTTTTTCTAT
TTCAGGGACAATGCGCTCAGAGAAATTTTGAAGAAATTCCGTTGATCTTA
TTGGTGGAAACATTTATATACAGAAACCGATTTATGTAAAGGACTAAATA
TTTACAGTGTAAGACCAGTGCTACAAATGAACAGAGCACTATGGGTAAAG
AAAATCGACAAGATATTGCATTACGTTACATATGACATAATATTTTTTCA
AAAGTTCACACCCCTGGTGAAAAATGTTAACAAATTAAAAAATCAAGCGA
TAACGTAAGGATGATTCTTAACTGCCAAAACATCACTTCTTGGGATTTGT
AACTCTCTAAATGTATACAAGTGTACAAAATCTATAATTTTCTATAAAAT
GTTAGTTGTCTATACTGGAAATTACCAAAGATATCATATGTCATAACCAC
CGGGTCAAGCCGTTATCGGGTACTGCAATGTCCGGTTTTGAGTCATCTTT
CAAATTTTCTCGTCTTGTTAACACTTCTTTGCAACTTCGGACGATTACTC
GACAAAATTCTTCATTTTTCAGAAAAGGCTCCTACAAAGAAAAGTCGAGA
ATCGATGATGATTGTTGTAGGTCATCAAAAAATATACCCCTACTTCTGTG
CCCTTGTAGCCTGGCGGTGCTTCGTGCTACCAGGTGGGAAAAAAAATTCT
AGAACAAATTTCTATGGGAACATAAAATTGTTTTCAGCAAAAAAACAGAC
AGGGGATTGTTTGTAGGGCATTTTATCATTCATTGTCAATAAGAATTGTT
TTTGATCAAACCTTCCAGTAAGGAGAGGGTCCCGAGGGGGCTGTGACACA
TGGTTGTGTCAGTACTTTGATATTTTTTAAACAAAATAAGTCTTACCATA
GACGTTCTTTTTCCCTTCTTTGGGATAGGTATACTTGCCAAAAAAGCATC
AACACTGATTATCGTTAAACAAAACACCAGAATGGCAAACTTTGCCATAT
TTCTCTATGTATAGGAAGAGTTTGCAAATATTTTTTATCCCTCTTTTTTT
TTGTAACTGTAATGTTTTATATCCGACTTTTGTAAACGCTGAAAAAGATA
GAAAATGATTTCGTTT

Coding sequence (CDS) from alignment at sc0000094_pilon:152002..154317-

>MSTRG.12438.1.p1 ID=MSTRG.12438.1.p1|Name=MSTRG.12438.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1026bp|location=Sequence derived from alignment at sc0000094_pilon:152002..154317- (Clytia hemisphaerica_ch_hm2_pilon)
GGACAATGCGCTCAGAGAAATTTTGAAGAAATTCCGTTGAGAGGTGTTGT
TTCAAAGACATTGACTTGTGGATGTTGTTTAGAATGTGCCAAACAGGTGA
ATGAAGAATGTGGTGGACCTTATCATTATTATGGGAGGTGTGACCATGCG
TTGGTTTGTGTTCCTAAACTGGCTGTTCGAGATCGATACCCTGTCGGTGT
ATGCAAATCTAAATGCGTTACTTGGTTTTTATTTCGATTTCTTTGGTGTT
TGTTGTTATGGAAACCGATTGTTTACTTTGTGATCCCATGCCAAAATGCA
CGGATTTCGAATGCTTTGATCACGAGCCAGAATGTGGAGAAGGGACAATG
CGCTCAGAGAAATTTTGAAGAAATTCCGTTGAGAGGTGTTGTTTCAAAGA
CATTGACTTGTGGATGTTGTTTAGAATGTGCCAAACAGGTGAATGAAGAA
TGTGGTGGACCTTATCATTATTATGGGAGGTGTGACCATGCGTTGGTTTG
TGTTCCTAAACTGGCTGTTCGAGATCGATACCCTGTCGGTGTATGCAAAT
CTAAATGCGTTACTTGGTTTTTATTTCGATTTCTTTGGTGTTTGTTGTTA
TGGAAACCGATTGTTTACTTTGTGATCCCATGCCAAAATGCACGGATTTC
GAATGCTTTGATCACGAGCCAGAATGTGGAGAAGGGACAATGCGCTCAGA
GAAATTTTGAAGAAATTCCGTTGAGAGGTGTTGTTTCAAAGACATTGACT
TGTGGATGTTGTTTAGAATGTGCCAAACAGGTGAATGAAGAATGTGGTGG
ACCTTATCATTATTATGGGAGGTGTGACCATGCGTTGGTTTGTGTTCCTA
AACTGGCTGTTCGAGATCGATACCCTGTCGGTGTATGCAAATCTAAATGC
GTTACTTGGTTTTTATTTCGATTTCTTTGGTGTTTGTTGTTATGGAAACC
GATTGTTTACTTTGTGATCCCATGCCAAAATGCACGGATTTCGAATGCTT
TGATCACGAGCCAGAATGTGGAGAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12438MSTRG.12438Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12438.1.p1MSTRG.12438.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12438.1.p1.exon3MSTRG.12438.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12438.1.p1.exon2MSTRG.12438.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12438.1.p1.exon1MSTRG.12438.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000094_pilongenomesc0000094_pilon:152002..154317 -