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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000094_pilon:138825..144493- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12436.2.p1 ID=MSTRG.12436.2.p1|Name=MSTRG.12436.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5669bp|location=Sequence derived from alignment at sc0000094_pilon:138825..144493- (Clytia hemisphaerica_ch_hm2_pilon)
AGCAATCAAAAAAGATTGGATTAATTTTCAGTCGAGTGAAAAAAAATGGA
TTAGTATAGTAAGTGTTTCATTTCGTCTTTATGTTTTTGCGGTACATCAT
ATCATTTGAGCTTTGTTTTGAACTCGTTGCAAGGGAACTGATTGATTAGC
AAGTAAAAAGTTAGAGGGAAGTTTCATTCTTGAATTTCACTCAGAAAAAC
GACGGAAAAAGCACCGATTTCACTTTGCAGGCATCTTGAATCTAAAAAAG
GACAATCTTTTAAATACGCAGAGGGGCGAAGGACAAAGAGATACGTTAAA
CCTAACAAACATTTATGAGATTTTTATGACTTTGTGAAAATATATTTTAC
TTTACTGATCATAAGTTTATTGTAACCATGGCAACACACGGGAGAAGATG
TAAGTATCTTTTACATGTCTGATATCCGCACAGGCTAATTTGGAGAACGC
ACTGCGGCTATGGGATTGTATGGGTTTTTATGTTTGATTTGATAGAAAAC
AGGGATTGGGGGTTAAGTTAGTCACAAGTGATATTGCGTAGCACAGTTGC
ATGATATGACTAGGTAAACTAATTAAAATTCACAACTATATTTTATGTAC
ACAAACACGAGAAAGTTCAGGTTGTTAAGTTGATGAGAATTTCTTTGCTT
GCGAAATCGTTTGTGTAGTAAGGAAGTATACATACCAGATATTAGTTTGT
AAGCATTGATTTACTAGTATTATATTCAACTAGCCCTACTAAACAAAACT
ATGGTCACTCCAATAAAATGGCATTTCCTCTCTCTCTCTGAGAAAGAGAC
CGACGGGGTTTGCAGCTGTAATCTTTTAAAAATCTTCTTTTGAAATTTAG
GAATAAGTCTCCTTTAAATGGATCTACTTTTCCTCAAAGTTCCTATACTG
TAATAGCATCTAGAATAGCACAAAATAGCATCACATCTCCGTATCCTGCT
TGAACTAGCCTATACTAGACGTTACGGCTTTCTATTTTTCTACGCTGAAA
AATCCCGGTTTTTGGTGAGGTGCTCGCTACCTAAGTACCCACTATTTCTA
TAAGTACTCCCATCAGGATTCCTTCTAACGGAAAAACTCAGAAACCGAAT
ACATCAATATCTAGGTGGAACAGCAGTGATTTTTAACAATTTTCCTGCAA
TTCATCAAAAAGTAAATTATTTCAAATCAAAAGCTAAACGAAAATGGCAA
AAACCTCACGGGGTCATCATAGAGGCTCATTGAGAATAAATCTAAAACAT
CTATCCATATCGTGCCCTTCATAGTTTGAACAGGAAAACATGTAAACAAA
TAAAATCCTTGATTGCAGTGGTAAGAAGTAAAATTTACACGTTTTTTTAT
AACAACAAACTATATAAGAACATTTTCATTTTGCTTTCAATGGCCAAAAT
ATCAAGAACAAGTTAAGAAAATCTTAAGCCTTTGTAGACTCCAAAACACA
AAAACACAAACACAAAAAGGAGAAAACAAGAACATATTAACCCTTTAACC
GCCGTTCGTATTTTTTAAGGTTCGACCTATTTGCCACGGAAAAAAAGAAG
GTTCGACCTATTTGCCTATGTCGGCATATGCTGACATGGGAAAAAAGTAG
CGATTTTGAGTTCATTTTCTGAATAATATATGAAGTATTAGCCAAGGACT
ATAACTTTGAGTTGAACATTGTAGAATAGTTATTTTTCAACATAGAAAAG
TTTGTAACTATTAATTTTTTATTCAAACCACCTAATACAAAAACCTTGTA
AAAAATGATAAATTTTCGGCAAATAGGTCGAAATTTCGCATGTCGGCAAA
TCCCGACAATGACAAGGAAATCGAAAATGCTCATGTCGGCATATGCCGAC
ATCGGCACGGAAATGGTTAAGAACATTTTTGGGCTTAAAACTCAAAAGCT
AAGAACATCCGAAGACTTTTTGGATATTCTTATAAAAAAACCCGTGTAAA
TGAAAATCAGTAAAAACACCAAAAGCTCAGAGTCAAGAAATATTTTGGTT
TTGCTATACCAGTTTAAGATATCAGACCAGAAGACTCAAGAAAGGAGACA
AAACTTCATAGGGGATTTGTACTTTTACGGTGTGACAGGATCGGCCCTTT
TCTAGTACGATATTACGGGATTTTTTTCAATTTTCAGGATTCCGGGGTTC
AGCAAAAACTTTAACGGGAAAACGGTATTTCGTACCCCCTACAACCTCCC
CCCCTTCATACAGTGTATGTAGAAAGGGGATGAGTAGTTAGGTGTCGATA
AGTGGGTAAACATTAAAGGTTACACACAGGGGGTGGATGATCAAGTCTTT
TTTGATTGGTAAAATACGTCATATTGTGTAAAAATAAATCACGGCAATTC
ATTAAAGTATGAAATGAGATTACGTTTTGCTGTGATTACCCCTTGGCAAG
AAAATAGATCACGAATTCTCATCTCCTGTGAAGTTACATGTTGAGAGAGG
AATTATTTGTTTTTCTGATAGATTAAATATAAGTCAAGTTCGGTCAGGTG
AAAATTATGATAATTAATTTGATTAAGGAATCATTAGGTAAGATTTAGTC
TTAAATTTGATTTTGAAAGAATTATAGTACTATTTATGAGATATGATTGG
TTGGGTACGCAGAAAAAAAGTGATTCTTGTTGTTAATATTCATGGTTATT
CTTTCAGGCCGTGTACTGTATCCTATCTTTAAGATAATTGTATTGAAAGT
AGCTTCGATTACGTTCAGATTTTGGTAGTCCGCAGACAAGTTTAGCGAAG
ATACTTTCTGGAAAAAGAGAGTACACATTTGATACAAGTGTTTTGAATTC
AAAGTCTTCTCCCTTGTTCATAGAACAAGAGAAACTTTCGAGTTGAAAAA
GTTAGTTTTATATAGTTGGTTATTGATACATTTGAGTCAATATTTAAGAA
AACTAAAAACACCAGAAAGTACACAGTTACTAGTCTATAAGTAAGTTCTC
AGGTTGCTCTACTTTTTTATCTTTTGACTTGATTTTCTTGATTAACAGTA
GTGATATTATTGTACTATTTTATCAATTTTGGTTTTTATAAAAAGGGAAG
AGGGAAGGAATTAAAGTAGACTGGAGTCGTTCATAATGCATAGTATAGGC
GTTATATGATAATATGATTATTGTTACGGGATTTAGCTGGTATAAAATTT
GTTCACTCCATTACTTTTTGCGTTATTTCTACTATGTCTGAATTAGTCGT
CTAGCTTGCTAGACTAGAATTAAAGAGAGTTTCTGATCGATCGTCGGCCA
AAGTACATTTTAGAGGGCAAAAAGTATTTTTGACTAAACTAAAAGTTTTT
CTTGGTAACAACTATCTATTCTCAAACATTATCATAGAGGATATCTTATA
TTATAAAATGATAAAAGGGTTTTTATTGAGGTGTAAATTTGCGCTTGTCG
ATTCAAAAATCTTAGAGATGAGGTAATCGCAAAACGAAATTTTGTTACAC
AAAAATTAACACCATGCTATCAAGAATTTGAGCAAACTGCGTGAATATTA
ACTAATAAGTTCCTATGGCGATCAACGAAACAACGGGAAAACTCAACTAA
GCTGGATGCTAATTTTCTAAATCAGTTTAATTCTTTATTGATATTTTTCT
ATTGATTTTTAGTATTGAATTGGAATCATGCCTGTAACACTTGTTAAGAG
TTTTGAAGAACCGTCAGACGATACAGTAGAGAAAGAAGATCGAGATAAAA
AGACGATGGGAAAAACGCTGTCTAAATGGATGTTCAAAAATGCTAACAGT
GTGGCAGATATGTCGGAAGACCGGGTCCAACAAGTACCCGGATCTTTAGG
CTTAACCTTGTTCAATGTGATGGGATTGGTCAAATCCGGACACCTTTTCT
ACCGGAACAGACGAGATCGAAACAAATCGAATGTTTACAAGGTGTCTATC
TACCAGCCGAGAATCGTTTTATGTAGTTTTGATGGCATACGACAAATGTA
CGAAAACACAGCCGTCCGAAAAGAACCAAGCTTCGGAATGTTTGTCTTCA
ACCAGGAAATCTTAGGAAATCACACACCTTTGATTTTCGAAAATGACGAA
ATACACCATCAAAGACGTCACATTTTTATCGAACTGTCAAAGAAAATATT
CTGTAACAAAAATTTCATCAACGAGCTTTCCCAAAGCATTAGTTCAGAAT
TAGACCACGTGATTGATACAATGACATCACAACCATCGTCTGATTTCGAA
GATGCATTATCTGGCGCTGTTGGGAACGTCGTTACCAGATGCATTGTGGG
AAAAACAATCGATAACGAACTCCTTAAGAAATGGATGGATAATTGCTTGA
TCAAGAAATTCAAGAAAGCAAGAGCAGAAGGGCCTTTGGTTTATGAGAAA
ATACGACAATCGGTAAAAGAAGGTCCGATTTTCCGTGAGTTTGCTGCAGG
TTTAGTAAAAAAGAACGGCTTGTTGGAGGAAGATATATGCAACGAGATCA
TCTTTGCTTTGATGTGAGTATTATTTATTGGCTTTAAAGATAGGATAGTG
TCAAAATAAGCAATTACTCATATTGATATGTTTTTCATAATTCGCCTCAG
GGAATTGAGACGAAGCAACCACCCAATCAATCAAGTTAAGTAATCTTCTT
TAAAAAGGTCTGTGTTGCATTGATAGCACTTTCAAAAATTGTGTCTTCTA
ACTTATTCGTCGCATCGATTGCGATAAGGTGAAGGAATAAAGTAGCAAAA
TTGGGTATTATACATGGTTTTGATGATAAAACATTCTTATTTTTTTCTCT
TCTAGTTTCAATGCTTATAAAGCATTACACGGGTTTGTCGTTTCCGCCCT
TGTTCATTTATCCAACCTCTCTGAAGACAAACAGATCAAACTACAAAACG
ATGCCTCAAACTTTCACCAAAGCACCGACAAAACAACAGAATTAAATAGT
GCAACTGATGTGGAGAATTATACACTTGAGATATTTCGCTTATTCCCGCC
CGCTTCGTTTGTGTTCCGGAGAGTGACGGAGAACTTCGTACTTCCGTTAA
AATCCGGTAACTATCAGGTCAACAAAGACGATCTCTTGTGTGGAAACGTC
TATTTGAGTCAAAGAGATCCCGATATCTTCGACAATCCAGATAAATTAGA
CCCTGACCGTTTCCAGCGACAACCACATCTCAAAGACTATTTAACATGTT
TTGGCGCTCCATTCTTACAAGACAGTGTGCCGAATATACATAAATGTGGA
GGTCAAAAACTAGCCTTAACCTTTGCAAAGGTCTTTGTAATGCACCTTTT
GACATTGAGAATTGAGTACGACGGACAACCTTCATGGTCCGGTAAGAAAA
TTAAGCGAATCATTGGTTCAGATAAACCAGTGAGAGTGAAAGCTATACGG
AAATGAATATAATGCATCTTAATAAGGCATACCTACGTTTGAGAGATTGA
AGATTGTATAAAGGGAACGAAAATTGAACGTACAACGGACACCAATTTCA
GATTTGCAGGATTTGACACTTTTTGATTTAATTCGAAAAAAGAACAACAG
TGAATTTATGTCTTATACAAAAACATGGCGAAAGATGTCATATTTGGCAT
GTGTATATAGTATTGTAACGAATTTCATTTTGGAGTTGGTCAGATATATA
TTTTTTTATAGTTCTATTGAGAGTGTGACCACAAATATCTTGTAAGAAAG
ATACTTACTACAAATAAAT Coding sequence (CDS) from alignment at sc0000094_pilon:138825..144493- >MSTRG.12436.2.p1 ID=MSTRG.12436.2.p1|Name=MSTRG.12436.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2874bp|location=Sequence derived from alignment at sc0000094_pilon:138825..144493- (Clytia hemisphaerica_ch_hm2_pilon)
TTTCAATGCTTATAAAGCATTACACGGGTTTGTCGTTTCCGCCCTTGTTC
ATTTATCCAACCTCTCTGAAGACAAACAGATCAAACTACAAAACGATGCC
TCAAACTTTCACCAAAGCACCGACAAAACAACAGAATTAAATAGTGCAAC
TGATGTGGAGAATTATACACTTGAGATATTTCGCTTATTCCCGCCCGCTT
CGTTTGTGTTCCGGAGAGTGACGGAGAACTTCGTACTTCCGTTAAAATCC
GGTAACTATCAGGTCAACAAAGACGATCTCTTGTGTGGAAACGTCTATTT
GAGTCAAAGAGATCCCGATATCTTCGACAATCCAGATAAATTAGACCCTG
ACCGTTTCCAGCGACAACCACATCTCAAAGACTATTTAACATGTTTTGGC
GCTCCATTCTTACAAGACAGTGTGCCGAATATACATAAATGTGGAGGTCA
AAAACTAGCCTTAACCTTTGCAAAGGTCTTTGTAATGCACCTTTTGACAT
TGAGAATTGAGTACGACGGACAACCTTCATGGTCCGGTAAGAAAATTAAG
CGAATCATTGGTTCAGATAAACCAGTGAGAGTGAAAGCTATACGGAAATG
AATGCCTGTAACACTTGTTAAGAGTTTTGAAGAACCGTCAGACGATACAG
TAGAGAAAGAAGATCGAGATAAAAAGACGATGGGAAAAACGCTGTCTAAA
TGGATGTTCAAAAATGCTAACAGTGTGGCAGATATGTCGGAAGACCGGGT
CCAACAAGTACCCGGATCTTTAGGCTTAACCTTGTTCAATGTGATGGGAT
TGGTCAAATCCGGACACCTTTTCTACCGGAACAGACGAGATCGAAACAAA
TCGAATGTTTACAAGGTGTCTATCTACCAGCCGAGAATCGTTTTATGTAG
TTTTGATGGCATACGACAAATGTACGAAAACACAGCCGTCCGAAAAGAAC
CAAGCTTCGGAATGTTTGTCTTCAACCAGGAAATCTTAGGAAATCACACA
CCTTTGATTTTCGAAAATGACGAAATACACCATCAAAGACGTCACATTTT
TATCGAACTGTCAAAGAAAATATTCTGTAACAAAAATTTCATCAACGAGC
TTTCCCAAAGCATTAGTTCAGAATTAGACCACGTGATTGATACAATGACA
TCACAACCATCGTCTGATTTCGAAGATGCATTATCTGGCGCTGTTGGGAA
CGTCGTTACCAGATGCATTGTGGGAAAAACAATCGATAACGAACTCCTTA
AGAAATGGATGGATAATTGCTTGATCAAGAAATTCAAGAAAGCAAGAGCA
GAAGGGCCTTTGGTTTATGAGAAAATACGACAATCGGTAAAAGAAGGTCC
GATTTTCCGTGAGTTTGCTGCAGGTTTAGTAAAAAAGAACGGCTTGTTGG
AGGAAGATATATGCAACGAGATCATCTTTGCTTTGATTTTCAATGCTTAT
AAAGCATTACACGGGTTTGTCGTTTCCGCCCTTGTTCATTTATCCAACCT
CTCTGAAGACAAACAGATCAAACTACAAAACGATGCCTCAAACTTTCACC
AAAGCACCGACAAAACAACAGAATTAAATAGTGCAACTGATGTGGAGAAT
TATACACTTGAGATATTTCGCTTATTCCCGCCCGCTTCGTTTGTGTTCCG
GAGAGTGACGGAGAACTTCGTACTTCCGTTAAAATCCGGTAACTATCAGG
TCAACAAAGACGATCTCTTGTGTGGAAACGTCTATTTGAGTCAAAGAGAT
CCCGATATCTTCGACAATCCAGATAAATTAGACCCTGACCGTTTCCAGCG
ACAACCACATCTCAAAGACTATTTAACATGTTTTGGCGCTCCATTCTTAC
AAGACAGTGTGCCGAATATACATAAATGTGGAGGTCAAAAACTAGCCTTA
ACCTTTGCAAAGGTCTTTGTAATGCACCTTTTGACATTGAGAATTGAGTA
CGACGGACAACCTTCATGGTCCGGTAAGAAAATTAAGCGAATCATTGGTT
CAGATAAACCAGTGAGAGTGAAAGCTATACGGAAATGAATGCCTGTAACA
CTTGTTAAGAGTTTTGAAGAACCGTCAGACGATACAGTAGAGAAAGAAGA
TCGAGATAAAAAGACGATGGGAAAAACGCTGTCTAAATGGATGTTCAAAA
ATGCTAACAGTGTGGCAGATATGTCGGAAGACCGGGTCCAACAAGTACCC
GGATCTTTAGGCTTAACCTTGTTCAATGTGATGGGATTGGTCAAATCCGG
ACACCTTTTCTACCGGAACAGACGAGATCGAAACAAATCGAATGTTTACA
AGGTGTCTATCTACCAGCCGAGAATCGTTTTATGTAGTTTTGATGGCATA
CGACAAATGTACGAAAACACAGCCGTCCGAAAAGAACCAAGCTTCGGAAT
GTTTGTCTTCAACCAGGAAATCTTAGGAAATCACACACCTTTGATTTTCG
AAAATGACGAAATACACCATCAAAGACGTCACATTTTTATCGAACTGTCA
AAGAAAATATTCTGTAACAAAAATTTCATCAACGAGCTTTCCCAAAGCAT
TAGTTCAGAATTAGACCACGTGATTGATACAATGACATCACAACCATCGT
CTGATTTCGAAGATGCATTATCTGGCGCTGTTGGGAACGTCGTTACCAGA
TGCATTGTGGGAAAAACAATCGATAACGAACTCCTTAAGAAATGGATGGA
TAATTGCTTGATCAAGAAATTCAAGAAAGCAAGAGCAGAAGGGCCTTTGG
TTTATGAGAAAATACGACAATCGGTAAAAGAAGGTCCGATTTTCCGTGAG
TTTGCTGCAGGTTTAGTAAAAAAGAACGGCTTGTTGGAGGAAGATATATG
CAACGAGATCATCTTTGCTTTGAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000094_pilon | genome | sc0000094_pilon:138825..144493 - |
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