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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000094_pilon:138795..142095- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12436.1.p1 ID=MSTRG.12436.1.p1|Name=MSTRG.12436.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3301bp|location=Sequence derived from alignment at sc0000094_pilon:138795..142095- (Clytia hemisphaerica_ch_hm2_pilon)
AGAAAATAGATCACGAATTCTCATCTCCTGTGAAGTTACATGTTGAGAGA
GGAATTATTTGTTTTTCTGATAGATTAAATATAAGTCAAGTTCGGTCAGG
TGAAAATTATGATAATTAATTTGATTAAGGAATCATTAGGTAAGATTTAG
TCTTAAATTTGATTTTGAAAGAATTATAGTACTATTTATGAGATATGATT
GGTTGGGTACGCAGAAAAAAAGTGATTCTTGTTGTTAATATTCATGGTTA
TTCTTTCAGGCCGTGTACTGTATCCTATCTTTAAGATAATTGTATTGAAA
GTAGCTTCGATTACGTTCAGATTTTGGTAGTCCGCAGACAAGTTTAGCGA
AGATACTTTCTGGAAAAAGAGAGTACACATTTGATACAAGTGTTTTGAAT
TCAAAGTCTTCTCCCTTGTTCATAGAACAAGAGAAACTTTCGAGTTGAAA
AAGTTAGTTTTATATAGTTGGTTATTGATACATTTGAGTCAATATTTAAG
AAAACTAAAAACACCAGAAAGTACACAGTTACTAGTCTATAAGTAAGTTC
TCAGGTTGCTCTACTTTTTTATCTTTTGACTTGATTTTCTTGATTAACAG
TAGTGATATTATTGTACTATTTTATCAATTTTGGTTTTTATAAAAAGGGA
AGAGGGAAGGAATTAAAGTAGACTGGAGTCGTTCATAATGCATAGTATAG
GCGTTATATGATAATATGATTATTGTTACGGGATTTAGCTGGTATAAAAT
TTGTTCACTCCATTACTTTTTGCGTTATTTCTACTATGTCTGAATTAGTC
GTCTAGCTTGCTAGACTAGAATTAAAGAGAGTTTCTGATCGATCGTCGGC
CAAAGTACATTTTAGAGGGCAAAAAGTATTTTTGACTAAACTAAAAGTTT
TTCTTGGTAACAACTATCTATTCTCAAACATTATCATAGAGGATATCTTA
TATTATAAAATGATAAAAGGGTTTTTATTGAGGTGTAAATTTGCGCTTGT
CGATTCAAAAATCTTAGAGATGAGGTAATCGCAAAACGAAATTTTGTTAC
ACAAAAATTAACACCATGCTATCAAGAATTTGAGCAAACTGCGTGAATAT
TAACTAATAAGTTCCTATGGCGATCAACGAAACAACGGGAAAACTCAACT
AAGCTGGATGCTAATTTTCTAAATCAGTTTAATTCTTTATTGATATTTTT
CTATTGATTTTTAGTATTGAATTGGAATCATGCCTGTAACACTTGTTAAG
AGTTTTGAAGAACCGTCAGACGATACAGTAGAGAAAGAAGATCGAGATAA
AAAGACGATGGGAAAAACGCTGTCTAAATGGATGTTCAAAAATGCTAACA
GTGTGGCAGATATGTCGGAAGACCGGGTCCAACAAGTACCCGGATCTTTA
GGCTTAACCTTGTTCAATGTGATGGGATTGGTCAAATCCGGACACCTTTT
CTACCGGAACAGACGAGATCGAAACAAATCGAATGTTTACAAGGTGTCTA
TCTACCAGCCGAGAATCGTTTTATGTAGTTTTGATGGCATACGACAAATG
TACGAAAACACAGCCGTCCGAAAAGAACCAAGCTTCGGAATGTTTGTCTT
CAACCAGGAAATCTTAGGAAATCACACACCTTTGATTTTCGAAAATGACG
AAATACACCATCAAAGACGTCACATTTTTATCGAACTGTCAAAGAAAATA
TTCTGTAACAAAAATTTCATCAACGAGCTTTCCCAAAGCATTAGTTCAGA
ATTAGACCACGTGATTGATACAATGACATCACAACCATCGTCTGATTTCG
AAGATGCATTATCTGGCGCTGTTGGGAACGTCGTTACCAGATGCATTGTG
GGAAAAACAATCGATAACGAACTCCTTAAGAAATGGATGGATAATTGCTT
GATCAAGAAATTCAAGAAAGCAAGAGCAGAAGGGCCTTTGGTTTATGAGA
AAATACGACAATCGGTAAAAGAAGGTCCGATTTTCCGTGAGTTTGCTGCA
GGTTTAGTAAAAAAGAACGGCTTGTTGGAGGAAGATATATGCAACGAGAT
CATCTTTGCTTTGATGTGAGTATTATTTATTGGCTTTAAAGATAGGATAG
TGTCAAAATAAGCAATTACTCATATTGATATGTTTTTCATAATTCGCCTC
AGGGAATTGAGACGAAGCAACCACCCAATCAATCAAGTTAAGTAATCTTC
TTTAAAAAGGTCTGTGTTGCATTGATAGCACTTTCAAAAATTGTGTCTTC
TAACTTATTCGTCGCATCGATTGCGATAAGGTGAAGGAATAAAGTAGCAA
AATTGGGTATTATACATGGTTTTGATGATAAAACATTCTTATTTTTTTCT
CTTCTAGTTTCAATGCTTATAAAGCATTACACGGGTTTGTCGTTTCCGCC
CTTGTTCATTTATCCAACCTCTCTGAAGACAAACAGATCAAACTACAAAA
CGATGCCTCAAACTTTCACCAAAGCACCGACAAAACAACAGAATTAAATA
GTGCAACTGATGTGGAGAATTATACACTTGAGATATTTCGCTTATTCCCG
CCCGCTTCGTTTGTGTTCCGGAGAGTGACGGAGAACTTCGTACTTCCGTT
AAAATCCGGTAACTATCAGGTCAACAAAGACGATCTCTTGTGTGGAAACG
TCTATTTGAGTCAAAGAGATCCCGATATCTTCGACAATCCAGATAAATTA
GACCCTGACCGTTTCCAGCGACAACCACATCTCAAAGACTATTTAACATG
TTTTGGCGCTCCATTCTTACAAGACAGTGTGCCGAATATACATAAATGTG
GAGGTCAAAAACTAGCCTTAACCTTTGCAAAGGTCTTTGTAATGCACCTT
TTGACATTGAGAATTGAGTACGACGGACAACCTTCATGGTCCGGTAAGAA
AATTAAGCGAATCATTGGTTCAGATAAACCAGTGAGAGTGAAAGCTATAC
GGAAATGAATATAATGCATCTTAATAAGGCATACCTACGTTTGAGAGATT
GAAGATTGTATAAAGGGAACGAAAATTGAACGTACAACGGACACCAATTT
CAGATTTGCAGGATTTGACACTTTTTGATTTAATTCGAAAAAAGAACAAC
AGTGAATTTATGTCTTATACAAAAACATGGCGAAAGATGTCATATTTGGC
ATGTGTATATAGTATTGTAACGAATTTCATTTTGGAGTTGGTCAGATATA
TATTTTTTTATAGTTCTATTGAGAGTGTGACCACAAATATCTTGTAAGAA
AGATACTTACTACAAATAAATACTACTATTGTAATAATACGGTTACGCTT
G Coding sequence (CDS) from alignment at sc0000094_pilon:138795..142095- >MSTRG.12436.1.p1 ID=MSTRG.12436.1.p1|Name=MSTRG.12436.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2874bp|location=Sequence derived from alignment at sc0000094_pilon:138795..142095- (Clytia hemisphaerica_ch_hm2_pilon)
TTTCAATGCTTATAAAGCATTACACGGGTTTGTCGTTTCCGCCCTTGTTC
ATTTATCCAACCTCTCTGAAGACAAACAGATCAAACTACAAAACGATGCC
TCAAACTTTCACCAAAGCACCGACAAAACAACAGAATTAAATAGTGCAAC
TGATGTGGAGAATTATACACTTGAGATATTTCGCTTATTCCCGCCCGCTT
CGTTTGTGTTCCGGAGAGTGACGGAGAACTTCGTACTTCCGTTAAAATCC
GGTAACTATCAGGTCAACAAAGACGATCTCTTGTGTGGAAACGTCTATTT
GAGTCAAAGAGATCCCGATATCTTCGACAATCCAGATAAATTAGACCCTG
ACCGTTTCCAGCGACAACCACATCTCAAAGACTATTTAACATGTTTTGGC
GCTCCATTCTTACAAGACAGTGTGCCGAATATACATAAATGTGGAGGTCA
AAAACTAGCCTTAACCTTTGCAAAGGTCTTTGTAATGCACCTTTTGACAT
TGAGAATTGAGTACGACGGACAACCTTCATGGTCCGGTAAGAAAATTAAG
CGAATCATTGGTTCAGATAAACCAGTGAGAGTGAAAGCTATACGGAAATG
AATGCCTGTAACACTTGTTAAGAGTTTTGAAGAACCGTCAGACGATACAG
TAGAGAAAGAAGATCGAGATAAAAAGACGATGGGAAAAACGCTGTCTAAA
TGGATGTTCAAAAATGCTAACAGTGTGGCAGATATGTCGGAAGACCGGGT
CCAACAAGTACCCGGATCTTTAGGCTTAACCTTGTTCAATGTGATGGGAT
TGGTCAAATCCGGACACCTTTTCTACCGGAACAGACGAGATCGAAACAAA
TCGAATGTTTACAAGGTGTCTATCTACCAGCCGAGAATCGTTTTATGTAG
TTTTGATGGCATACGACAAATGTACGAAAACACAGCCGTCCGAAAAGAAC
CAAGCTTCGGAATGTTTGTCTTCAACCAGGAAATCTTAGGAAATCACACA
CCTTTGATTTTCGAAAATGACGAAATACACCATCAAAGACGTCACATTTT
TATCGAACTGTCAAAGAAAATATTCTGTAACAAAAATTTCATCAACGAGC
TTTCCCAAAGCATTAGTTCAGAATTAGACCACGTGATTGATACAATGACA
TCACAACCATCGTCTGATTTCGAAGATGCATTATCTGGCGCTGTTGGGAA
CGTCGTTACCAGATGCATTGTGGGAAAAACAATCGATAACGAACTCCTTA
AGAAATGGATGGATAATTGCTTGATCAAGAAATTCAAGAAAGCAAGAGCA
GAAGGGCCTTTGGTTTATGAGAAAATACGACAATCGGTAAAAGAAGGTCC
GATTTTCCGTGAGTTTGCTGCAGGTTTAGTAAAAAAGAACGGCTTGTTGG
AGGAAGATATATGCAACGAGATCATCTTTGCTTTGATTTTCAATGCTTAT
AAAGCATTACACGGGTTTGTCGTTTCCGCCCTTGTTCATTTATCCAACCT
CTCTGAAGACAAACAGATCAAACTACAAAACGATGCCTCAAACTTTCACC
AAAGCACCGACAAAACAACAGAATTAAATAGTGCAACTGATGTGGAGAAT
TATACACTTGAGATATTTCGCTTATTCCCGCCCGCTTCGTTTGTGTTCCG
GAGAGTGACGGAGAACTTCGTACTTCCGTTAAAATCCGGTAACTATCAGG
TCAACAAAGACGATCTCTTGTGTGGAAACGTCTATTTGAGTCAAAGAGAT
CCCGATATCTTCGACAATCCAGATAAATTAGACCCTGACCGTTTCCAGCG
ACAACCACATCTCAAAGACTATTTAACATGTTTTGGCGCTCCATTCTTAC
AAGACAGTGTGCCGAATATACATAAATGTGGAGGTCAAAAACTAGCCTTA
ACCTTTGCAAAGGTCTTTGTAATGCACCTTTTGACATTGAGAATTGAGTA
CGACGGACAACCTTCATGGTCCGGTAAGAAAATTAAGCGAATCATTGGTT
CAGATAAACCAGTGAGAGTGAAAGCTATACGGAAATGAATGCCTGTAACA
CTTGTTAAGAGTTTTGAAGAACCGTCAGACGATACAGTAGAGAAAGAAGA
TCGAGATAAAAAGACGATGGGAAAAACGCTGTCTAAATGGATGTTCAAAA
ATGCTAACAGTGTGGCAGATATGTCGGAAGACCGGGTCCAACAAGTACCC
GGATCTTTAGGCTTAACCTTGTTCAATGTGATGGGATTGGTCAAATCCGG
ACACCTTTTCTACCGGAACAGACGAGATCGAAACAAATCGAATGTTTACA
AGGTGTCTATCTACCAGCCGAGAATCGTTTTATGTAGTTTTGATGGCATA
CGACAAATGTACGAAAACACAGCCGTCCGAAAAGAACCAAGCTTCGGAAT
GTTTGTCTTCAACCAGGAAATCTTAGGAAATCACACACCTTTGATTTTCG
AAAATGACGAAATACACCATCAAAGACGTCACATTTTTATCGAACTGTCA
AAGAAAATATTCTGTAACAAAAATTTCATCAACGAGCTTTCCCAAAGCAT
TAGTTCAGAATTAGACCACGTGATTGATACAATGACATCACAACCATCGT
CTGATTTCGAAGATGCATTATCTGGCGCTGTTGGGAACGTCGTTACCAGA
TGCATTGTGGGAAAAACAATCGATAACGAACTCCTTAAGAAATGGATGGA
TAATTGCTTGATCAAGAAATTCAAGAAAGCAAGAGCAGAAGGGCCTTTGG
TTTATGAGAAAATACGACAATCGGTAAAAGAAGGTCCGATTTTCCGTGAG
TTTGCTGCAGGTTTAGTAAAAAAGAACGGCTTGTTGGAGGAAGATATATG
CAACGAGATCATCTTTGCTTTGAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000094_pilon | genome | sc0000094_pilon:138795..142095 - |
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