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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000094_pilon:127670..130043- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12435.1.p1 ID=MSTRG.12435.1.p1|Name=MSTRG.12435.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2374bp|location=Sequence derived from alignment at sc0000094_pilon:127670..130043- (Clytia hemisphaerica_ch_hm2_pilon)
ATTTAAGATCCTTTCAAACGTCAAGATTTCATAGAATAATCCTGAAGAAA
ATGTTTTGACTTTTAATGGATGTTCAAAATCTTTAAGAGGTGCACAGTAC
GTAATAAAACTAACAAAATATAGATATTGTTGTATATTTTAGATCTGAAA
ATCACATAACAAAAAAGTGTCCTGACATTTCACAAGAGCTGGGATGGTTG
AAATGGAGGTTTAGTCTGTGGAGAAGTTTGAGGAGATCCAATATCTTAAA
CGTAATCTGTAGAGAGACAGACCACTCGATTGATGTTGGTGGAGAATTTA
AAGCTTTTCAAAATGTTGGTGAACAGTTTGATTATATTACTGGTCATTTT
TTGTAAATCCAATACTGACGCATTACCAACAGACATAGACTGTAATCAAT
GCTCTTCAGAAGAATGCTCTTTAGACCTTACCATCCCATGTTGTAAATTG
TGTTTAGCGCACATCAAGTGCACACCTACTGAGATGATGGTTACTATACC
TCGGGCGGCCGCCAACTTCGCCCTCGAGGATTTATCGCTAGCCGATGGTA
AATGTGGCGGATATATAAGCGGTGAAAATTACATATTCAATAGTGGAATG
TCAGATTGTGGAACGAAAAGTGTTTTCATAAGACAATCACATATCTTATA
TAAAAATGAAGTACGACATAAGAATGGAAAGCCATTATATTCCTTAACGT
GTCTTTTCAAACGCAGGCTTCCACCTGTTCGTAAAGGAATAAGGGTGCGA
GCCAATGAAAACCAAGCACCTAGGATGTACCATACCACTGTTTTCGGTCG
CCGTAAGAATGACAATACAATCTATTTGGAAGACAATGAGCACTTTTTCT
TTGAGATTAAAGGACCAAGTTATTTGAAACGGCGCAACATGGAAATGGCA
GTGAAATCTTGTTATTTGGATATCACAGAAGGAAGCAATAAACCTGGTGC
AAATCCAAGAAGGGATGTTCTTATCAATAACGGGTAAGTGGCAGAGATTT
TATTCATCTTCAAATACTTCCCAGTAAGTACTATGTATTACGAAAGAGAC
GCAAGGTCTTTCAAAGGATCTCATATCATTATCATAGTCTGATTTTCTTC
CGATTATTAACACATCGTTGGTCAGGGTCAAAGTCGTTGCAAATAGCTAT
TTCCAGGGCGAAAGGCTTCAAAATATCAAGGATATGATCGTGAGCCTATA
TAGATATGTCTTATGATAATTAAAGCACAAAGTTTGAAACTAATATGCTT
TGTTTCAAAGAAAAACTTCCACTTCTAACATTTTGGAGAAAGATATAGCT
TTAAAACATGTCTTCAAAACGCAAATTCAATCAAGCTAATGGATACAGAT
GGATAAGTTACGACCAAACTGATTACTATTCACGGCCCCTTGTAGAGAAC
AAAACTGCTCCTTATTTGACAAGACTCTTCTTGATGAACTTTTAGAATCT
TTAAATCTGACCGTTGCTTTTGAAAGTATAAAACGTTTTCTTTGTGATTT
CAGATGTGCAAGGCAAGGAGTGGAGACATTAATGAAAACACGTTACACTT
TATGGTTTTCAGTCTTCATGAACGACGTGCCACAACAATATAACAATACA
GCTGTTCTCAATTGTGACGTGATCTTGTGTTATAACTCGTATAATAGACG
ATGCAGATTCAACTGCTAGAAGGAGTTTTGATTACCTGAGCAGATAGGAT
GGCATAAACAATCCAATTTGAGGATACTGGACCTTAACTATGTCGGCAAT
TCATACTATTGCCAAGGTTGACAGACATAATGAAACTGGAATTAGGTGAT
CAGTTCTTAACCAATTGGACAGAGCATTCGAATAAAAAACTTCCAAAAAT
AACAGGCAAAATTAAAAAAACAAAACTGTTACAAACTGTTACATAGAAAG
CAACTGTTCAAAAAGGCAGTTTAAAAAAGACTTGAAATTTCTTTTGGTGC
AGTATAAGAAGGACTGATTATGTTGGAACCAAGGAGCAACCCTGGTGAAA
AAAGACTTGCTTTCTTCTGGCATCTAAACTAATGCAGCTTTGCAAATTAT
TTTAACGAATTAAATGGAGGGTATTTAATAATTATATTTTAATTACCTGT
AGAATAACCTCATGTAAATAAAAATATCCTTCTCGAAATTTGAAAATATC
ATGAAAAATTGTAAATAGGAATAATTATATAATCGAACGCAATCAATCAT
CCATATCTGAGCAACGTCAGAAAATCTTTCTCTGGTTTTGAAACTTTTTA
ATATTAGGTGACGTAAACATAAAGGAAATCGTAATTTGAAAATATTTTTT
GTATGAGGGAAAAGAAAAGTTTTGTACGCTTCAGATCTTTTCAACGACAT
TGTAAAAATCAAAATTGATAAAAG Coding sequence (CDS) from alignment at sc0000094_pilon:127670..130043- >MSTRG.12435.1.p1 ID=MSTRG.12435.1.p1|Name=MSTRG.12435.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1734bp|location=Sequence derived from alignment at sc0000094_pilon:127670..130043- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGCAAGGCAAGGAGTGGAGACATTAATGAAAACACGTTACACTTTAT
GGTTTTCAGTCTTCATGAACGACGTGCCACAACAATATAACAATACAGCT
GTTCTCAATTGTGACGTGATCTTGTGTTATAACTCGTATAATAGACGATG
CAGATTCAACTGCTAGATGTTGGTGGAGAATTTAAAGCTTTTCAAAATGT
TGGTGAACAGTTTGATTATATTACTGGTCATTTTTTGTAAATCCAATACT
GACGCATTACCAACAGACATAGACTGTAATCAATGCTCTTCAGAAGAATG
CTCTTTAGACCTTACCATCCCATGTTGTAAATTGTGTTTAGCGCACATCA
AGTGCACACCTACTGAGATGATGGTTACTATACCTCGGGCGGCCGCCAAC
TTCGCCCTCGAGGATTTATCGCTAGCCGATGGTAAATGTGGCGGATATAT
AAGCGGTGAAAATTACATATTCAATAGTGGAATGTCAGATTGTGGAACGA
AAAGTGTTTTCATAAGACAATCACATATCTTATATAAAAATGAAGTACGA
CATAAGAATGGAAAGCCATTATATTCCTTAACGTGTCTTTTCAAACGCAG
GCTTCCACCTGTTCGTAAAGGAATAAGGGTGCGAGCCAATGAAAACCAAG
CACCTAGGATGTACCATACCACTGTTTTCGGTCGCCGTAAGAATGACAAT
ACAATCTATTTGGAAGACAATGAGCACTTTTTCTTTGAGATTAAAGGACC
AAGTTATTTGAAACGGCGCAACATGGAAATGGCAGTGAAATCTTGTTATT
TGGATATCACAGAAGGAAGCAATAAACCTGGTGCAAATCCAAGAAGGGAT
GTTCTTATCAATAACGGATGTGCAAGGCAAGGAGTGGAGACATTAATGAA
AACACGTTACACTTTATGGTTTTCAGTCTTCATGAACGACGTGCCACAAC
AATATAACAATACAGCTGTTCTCAATTGTGACGTGATCTTGTGTTATAAC
TCGTATAATAGACGATGCAGATTCAACTGCTAGATGTTGGTGGAGAATTT
AAAGCTTTTCAAAATGTTGGTGAACAGTTTGATTATATTACTGGTCATTT
TTTGTAAATCCAATACTGACGCATTACCAACAGACATAGACTGTAATCAA
TGCTCTTCAGAAGAATGCTCTTTAGACCTTACCATCCCATGTTGTAAATT
GTGTTTAGCGCACATCAAGTGCACACCTACTGAGATGATGGTTACTATAC
CTCGGGCGGCCGCCAACTTCGCCCTCGAGGATTTATCGCTAGCCGATGGT
AAATGTGGCGGATATATAAGCGGTGAAAATTACATATTCAATAGTGGAAT
GTCAGATTGTGGAACGAAAAGTGTTTTCATAAGACAATCACATATCTTAT
ATAAAAATGAAGTACGACATAAGAATGGAAAGCCATTATATTCCTTAACG
TGTCTTTTCAAACGCAGGCTTCCACCTGTTCGTAAAGGAATAAGGGTGCG
AGCCAATGAAAACCAAGCACCTAGGATGTACCATACCACTGTTTTCGGTC
GCCGTAAGAATGACAATACAATCTATTTGGAAGACAATGAGCACTTTTTC
TTTGAGATTAAAGGACCAAGTTATTTGAAACGGCGCAACATGGAAATGGC
AGTGAAATCTTGTTATTTGGATATCACAGAAGGAAGCAATAAACCTGGTG
CAAATCCAAGAAGGGATGTTCTTATCAATAACGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000094_pilon | genome | sc0000094_pilon:127670..130043 - |
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