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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000094_pilon:76922..79564+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12431.1.p1 ID=MSTRG.12431.1.p1|Name=MSTRG.12431.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2643bp|location=Sequence derived from alignment at sc0000094_pilon:76922..79564+ (Clytia hemisphaerica_ch_hm2_pilon)
CTGGTATTGAAACATTTTGTcgaatattcaaattttaattctcTATCTTT
TCTCTCTACAGAATAACtaataaaaaattgagaaatataAAGAAAGATAA
GAAATATGATTGAGAAGACGGTTTGTTCATATGGTTACATACCAGAAATG
ATGCGCCCCCATAATGGCGGATGTAGTGCGTTTCCAGAGGAACAGAGATG
TAAACAAAACGCCAAAAAGAACGCGAGGCGTCGTGCTGCAGAATCACGAA
AAGCGATCCGTTGCAGTGATGGAGAATCGGACACCAGTGATGGCTTCACT
GTCAATTCCGGTGGCTCAGGAAGGTCCGGTGATTGGGGACCACCGAGAAT
GCGACAAAAACCAAAGTATTCCCGAAAACGTCACGAGCACCGAGCTTCAT
TCACCGATAGTGGAATTTCGTTAACGAAAACCGATTCTGGAGACTTATCA
GAATTTTCGTATGGAGGTAAGATGATTTAATAATTCatcatttttatgaa
atcttTTTGGTCTGAATGTATAAACGAGAAGCCTGTATTATTCATCCACC
CCTTGATTCAtattcaaatctaaataaattattccgtttttttttcagaa
cgaTATTTCATCAACCGGCCAACAGACCCTTACAGTGATAGTTCACATGA
AAGACAGTCGCGCATTCTAAAACAACAAGTGGTGGTCACAAGAACACAGC
GATCGCAATCGAAAATTGAGTCCAAAACTGACGGATCTTCAGTTTACCAA
AAAGAGATCACTTCGCTTAAACGATCTAGCTCTTGTTCTGCTTTACCCTC
CAACATCAAACAAATCAACAGACAAGACTCATCCCAATCGTCACGCTCAG
CGGTCGCACCTCAACAACAGCGTATATCAAAACCATCCGCAAATATTGAA
GAGAAAGAAAACGCCATTCTGGAGCAATGTTACCGCAATGAAGGTTTATC
TCCAGAATGTGCTGAAATGGGATGCATGTATGATTGCCATCATCAACATT
CAACTTCACGATTCCCTCTACCAGATCATTTAAACTATCCACTCAACAAA
TATTACCAATCTGAAACCAATCTTCATCGCATTCAACCACTCAAAAAGAT
TCGATCAAGCTTGCGTAAATTGCGGAACAAAACCAACAATATTCATCTCT
CGACACCAGATCGTTATGACAATTACTCCCTCTCAGACAATTATTCCATT
ACACCGACATTGGAATCTTTAGATAGTAGTTATTTGAACTcattaaatga
ctttgaaagCAGTGAAGCCATTATGGCTCGCTTAGCTAAAAATCCAAACT
CTAAAAAAGCATGggttaagaaaatctttaaatggAATATTGGTAAATCT
TACAACATCAAGAATAAAAAATCACCGAAGAAAGATGTCAAGGACAACTC
TTCAGAAGTTCAGGAAGAGCCTTCATTGAAAAAACGCTCTCACTCCACAC
GCTCCATTCCAGAGGCTTTAATCAACTTCATTTCAAAAACTCAAGATAAA
TATTCTGCAACAACAACTGCAACCCATGAATTCGAATTTATGGTACCGAC
AACGTTACAACGAGCCAATAGTATGCCATCTATTGCAACCAATCGTACTC
AAACTCCCAAAACACGTGATACTGACGTCATCTTTTTTAACGAGGACGGT
CCAAAATCTCAACAAAATCAACATAAAACTCCATCAAAATTCTTTTCCAA
TAACAACCCTCAttacgaagaagaagaagagtttGATTATTACCCTCATG
AAAACAACAACCACCCTGTTAACCACGCCCCACACCATTTCAAGCAGCCT
TGCTACACTTCATGCCAAGACATCCGAATGGCGCCCCCGCCTCAACCAAC
GCCCGGACATTGTCATTGCTGTCAGCATGTTCAGCATGGAGCTTACATGC
CACCACAGCAATATGTTCAATATATGCACCCTGCTCCAGTTCAATACGGC
TATTATATCCCCAATGGAGGTCACCAACAGCCTCATTATCCAGTCGCAGC
CGATTATGAAGAAATGGTTCAACCACAACCGATTGCGTACTACCAGACAT
CCGATAATTCCGATCTCAAACCCGGGCAACGTAATCCCCCGATTGTCGCC
CCGTTAGATATGAAAGTTTCGGTTGAACGACGTGCCGAGCGTAGAAAGAT
ATGTGATATGGTTTTCGATACCTTTGTTTGAACTAAAGTACATTTTTTGA
TGATTCAAGGCTGGACCTTGATAAAATGAACTTCATGaaagattcaaaaa
aagaaatatagtatgaaaagacttttaaaacattttattttgtacATATA
TGATATAGGTTTGTCCACTTAGAAGATTTATTATTGTAAATAAATTCTTG
TCAACGTTAGtttttacttcaatttttgtGAAGATTTTTGTTCTCTTGCG
AAAAAGCTTCTCTCTGggctttcttcttttttgtttaaaaattagtTGGT
TGTAATTATCCCAATTTAAATAGTTAGCCAACATCTTTGACTTATAAAAG
TGGATACTTTTTTAGTTGTTGTCCattgtaaaattaatttttatttttat
ttcgaaaaacacgaaagaaaaatataagattcatgaaatttaattaaatt
aaatttatttattattaaattattagatttaCTCGGTTCAAAA Coding sequence (CDS) from alignment at sc0000094_pilon:76922..79564+ >MSTRG.12431.1.p1 ID=MSTRG.12431.1.p1|Name=MSTRG.12431.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3888bp|location=Sequence derived from alignment at sc0000094_pilon:76922..79564+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTGAGAAGACGGTTTGTTCATATGGTTACATACCAGAAATGATGCG
CCCCCATAATGGCGGATGTAGTGCGTTTCCAGAGGAACAGAGATGTAAAC
AAAACGCCAAAAAGAACGCGAGGCGTCGTGCTGCAGAATCACGAAAAGCG
ATCCGTTGCAGTGATGGAGAATCGGACACCAGTGATGGCTTCACTGTCAA
TTCCGGTGGCTCAGGAAGGTCCGGTGATTGGGGACCACCGAGAATGCGAC
AAAAACCAAAGTATTCCCGAAAACGTCACGAGCACCGAGCTTCATTCACC
GATAGTGGAATTTCGTTAACGAAAACCGATTCTGGAGACTTATCAGAATT
TTCGTATGGAGaacgaTATTTCATCAACCGGCCAACAGACCCTTACAGTG
ATAGTTCACATGAAAGACAGTCGCGCATTCTAAAACAACAAGTGGTGGTC
ACAAGAACACAGCGATCGCAATCGAAAATTGAGTCCAAAACTGACGGATC
TTCAGTTTACCAAAAAGAGATCACTTCGCTTAAACGATCTAGCTCTTGTT
CTGCTTTACCCTCCAACATCAAACAAATCAACAGACAAGACTCATCCCAA
TCGTCACGCTCAGCGGTCGCACCTCAACAACAGCGTATATCAAAACCATC
CGCAAATATTGAAGAGAAAGAAAACGCCATTCTGGAGCAATGTTACCGCA
ATGAAGGTTTATCTCCAGAATGTGCTGAAATGGGATGCATGTATGATTGC
CATCATCAACATTCAACTTCACGATTCCCTCTACCAGATCATTTAAACTA
TCCACTCAACAAATATTACCAATCTGAAACCAATCTTCATCGCATTCAAC
CACTCAAAAAGATTCGATCAAGCTTGCGTAAATTGCGGAACAAAACCAAC
AATATTCATCTCTCGACACCAGATCGTTATGACAATTACTCCCTCTCAGA
CAATTATTCCATTACACCGACATTGGAATCTTTAGATAGTAGTTATTTGA
ACTcattaaatgactttgaaagCAGTGAAGCCATTATGGCTCGCTTAGCT
AAAAATCCAAACTCTAAAAAAGCATGggttaagaaaatctttaaatggAA
TATTGGTAAATCTTACAACATCAAGAATAAAAAATCACCGAAGAAAGATG
TCAAGGACAACTCTTCAGAAGTTCAGGAAGAGCCTTCATTGAAAAAACGC
TCTCACTCCACACGCTCCATTCCAGAGGCTTTAATCAACTTCATTTCAAA
AACTCAAGATAAATATTCTGCAACAACAACTGCAACCCATGAATTCGAAT
TTATGGTACCGACAACGTTACAACGAGCCAATAGTATGCCATCTATTGCA
ACCAATCGTACTCAAACTCCCAAAACACGTGATACTGACGTCATCTTTTT
TAACGAGGACGGTCCAAAATCTCAACAAAATCAACATAAAACTCCATCAA
AATTCTTTTCCAATAACAACCCTCAttacgaagaagaagaagagtttGAT
TATTACCCTCATGAAAACAACAACCACCCTGTTAACCACGCCCCACACCA
TTTCAAGCAGCCTTGCTACACTTCATGCCAAGACATCCGAATGGCGCCCC
CGCCTCAACCAACGCCCGGACATTGTCATTGCTGTCAGCATGTTCAGCAT
GGAGCTTACATGCCACCACAGCAATATGTTCAATATATGCACCCTGCTCC
AGTTCAATACGGCTATTATATCCCCAATGGAGGTCACCAACAGCCTCATT
ATCCAGTCGCAGCCGATTATGAAGAAATGGTTCAACCACAACCGATTGCG
TACTACCAGACATCCGATAATTCCGATCTCAAACCCGGGCAACGTAATCC
CCCGATTGTCGCCCCGTTAGATATGAAAGTTTCGGTTGAACGACGTGCCG
AGCGTAGAAAGATATGTGATATGGTTTTCGATACCTTTGTTTGAATGATT
GAGAAGACGGTTTGTTCATATGGTTACATACCAGAAATGATGCGCCCCCA
TAATGGCGGATGTAGTGCGTTTCCAGAGGAACAGAGATGTAAACAAAACG
CCAAAAAGAACGCGAGGCGTCGTGCTGCAGAATCACGAAAAGCGATCCGT
TGCAGTGATGGAGAATCGGACACCAGTGATGGCTTCACTGTCAATTCCGG
TGGCTCAGGAAGGTCCGGTGATTGGGGACCACCGAGAATGCGACAAAAAC
CAAAGTATTCCCGAAAACGTCACGAGCACCGAGCTTCATTCACCGATAGT
GGAATTTCGTTAACGAAAACCGATTCTGGAGACTTATCAGAATTTTCGTA
TGGAGaacgaTATTTCATCAACCGGCCAACAGACCCTTACAGTGATAGTT
CACATGAAAGACAGTCGCGCATTCTAAAACAACAAGTGGTGGTCACAAGA
ACACAGCGATCGCAATCGAAAATTGAGTCCAAAACTGACGGATCTTCAGT
TTACCAAAAAGAGATCACTTCGCTTAAACGATCTAGCTCTTGTTCTGCTT
TACCCTCCAACATCAAACAAATCAACAGACAAGACTCATCCCAATCGTCA
CGCTCAGCGGTCGCACCTCAACAACAGCGTATATCAAAACCATCCGCAAA
TATTGAAGAGAAAGAAAACGCCATTCTGGAGCAATGTTACCGCAATGAAG
GTTTATCTCCAGAATGTGCTGAAATGGGATGCATGTATGATTGCCATCAT
CAACATTCAACTTCACGATTCCCTCTACCAGATCATTTAAACTATCCACT
CAACAAATATTACCAATCTGAAACCAATCTTCATCGCATTCAACCACTCA
AAAAGATTCGATCAAGCTTGCGTAAATTGCGGAACAAAACCAACAATATT
CATCTCTCGACACCAGATCGTTATGACAATTACTCCCTCTCAGACAATTA
TTCCATTACACCGACATTGGAATCTTTAGATAGTAGTTATTTGAACTcat
taaatgactttgaaagCAGTGAAGCCATTATGGCTCGCTTAGCTAAAAAT
CCAAACTCTAAAAAAGCATGggttaagaaaatctttaaatggAATATTGG
TAAATCTTACAACATCAAGAATAAAAAATCACCGAAGAAAGATGTCAAGG
ACAACTCTTCAGAAGTTCAGGAAGAGCCTTCATTGAAAAAACGCTCTCAC
TCCACACGCTCCATTCCAGAGGCTTTAATCAACTTCATTTCAAAAACTCA
AGATAAATATTCTGCAACAACAACTGCAACCCATGAATTCGAATTTATGG
TACCGACAACGTTACAACGAGCCAATAGTATGCCATCTATTGCAACCAAT
CGTACTCAAACTCCCAAAACACGTGATACTGACGTCATCTTTTTTAACGA
GGACGGTCCAAAATCTCAACAAAATCAACATAAAACTCCATCAAAATTCT
TTTCCAATAACAACCCTCAttacgaagaagaagaagagtttGATTATTAC
CCTCATGAAAACAACAACCACCCTGTTAACCACGCCCCACACCATTTCAA
GCAGCCTTGCTACACTTCATGCCAAGACATCCGAATGGCGCCCCCGCCTC
AACCAACGCCCGGACATTGTCATTGCTGTCAGCATGTTCAGCATGGAGCT
TACATGCCACCACAGCAATATGTTCAATATATGCACCCTGCTCCAGTTCA
ATACGGCTATTATATCCCCAATGGAGGTCACCAACAGCCTCATTATCCAG
TCGCAGCCGATTATGAAGAAATGGTTCAACCACAACCGATTGCGTACTAC
CAGACATCCGATAATTCCGATCTCAAACCCGGGCAACGTAATCCCCCGAT
TGTCGCCCCGTTAGATATGAAAGTTTCGGTTGAACGACGTGCCGAGCGTA
GAAAGATATGTGATATGGTTTTCGATACCTTTGTTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000094_pilon | genome | sc0000094_pilon:76922..79564 + |
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