MSTRG.12428.1.p2 (mRNA) -

Overview
NameMSTRG.12428.1.p2
Unique NameMSTRG.12428.1.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000094_pilon:24139..27011+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12428.1.p2 ID=MSTRG.12428.1.p2|Name=MSTRG.12428.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2873bp|location=Sequence derived from alignment at sc0000094_pilon:24139..27011+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTTGGGCCAGGAGGAAAAATTTATCCTGCaaatcgccaaaattagttat cactaaaataaatttctttaaagtaatattcatatttttttttatcttta aagaaaattctttgatcAACACGATGTGTCATATGTGTTACAGCAAAACG TATGATTTTGATGACCCAGAGTTCATCCATATAATGGGCTACATCAAAAT GTCAAATGAAGGTCTAACACCTAACCAAGCCATATCGATTTTTCCTTGGC TACAATATTTCCCTGACACCGAAGCactcaaaaaattgaaacttgCTGTA AAACAAGACACAGAATTCACACGTAAAATGTTTGATGAACATATCGCAAC TTTTGATCCTGAGAATATCAGAGATTTTACTGATAATCTACTTCATTTTT CACAAAACAAAGAATTATGGAAAGATGCTGGTTTCGAGACAATCACTCGA GAAGAAATTGAACCTGTGGTAAGTTCACATGTTCACTATTGTTTGCAGGT GTGGAAACCCAAGCTGCTCTTTTACGTTGGCTCTTCCTCTACATGATGCA TTTCCCAGAATATCAAACAAGAATCTATGAGGAAGTTAGATCGAATGTTG GACTGAAGCGTCGAATATCTCCCGAGGATAAAGATGTATGTCCAATAACT AATGCAATATTACTTGAAACTCATCGCATGGCATCTGTAGGCGCTCTTAG TCTCCCTCACAAAACGACCGTTGATACTTCAGCCGGGGGTTTTACTATTC CGAAGGATACAATGGTCTTTGTCAACCTCTACAGCATACATTATGATCCT ACACACTGGGATGAACCAGAGAAATTCAAACCAGAACGTTGGTTGAATGC TGATGGAAGTTTGAAGAAAGAGAAGCCAACACACTATCTTCCTTTCTCAG CTGGAACGCGGGTATGTATTGCAGAAAGAATGGCCAAAATGCAACTATTC ATCATCACTACTAACTTCTTTCgtaattttgaagtttcaaacgCTCCAGG AGAAGAATTACCAGGTCTAAAAGACGGCATCTATTGGTCAACCTTGAATC CACCTCGTCGTAAAATTGTTGTGACGAAACGAAAACATAACTGAGAAAAT AGGACATTGGATGAACGTATAGACAAGGTTACCGTTAGTTGATAAAATCT TTACGTGATTAtttttttAGTTACTTAGTTATAATTAGTTCTTTTGTTGT TGGTTTTTATCTTTCACGAATATAGAATTCATTCTTTTGATACTTCAAAT TGTGGTTTCGAGTCATCCTCGCTCTAGAATTgatgcttgttttttttctt gttttttttttctattatattttttttattactcactttttctttttttt taaatattattttattatattttctatttttttctattttaaattttttt gggttttcgattttcatttttatttacctTATTGTATGGTAGGGAAGAAA ATTGCTggtgacccggggggggggggggtactaggttggcgaatgagggg tatgtgcggtcgggacctccgaaaaccgatccttagagagactgattttt gctgaaaaggtgaccataagagagactttttgaaatttttttttcgactt ttgaaaaaagttatacccttagagagactttgttacaatttttttttgat ttttgaaaaaagtcatacccttagagagactttactacaattttttttct ggaaatcaaaaaatttcctaaaaatcctgaattttccgacccttagagag actaatttaaaactttctgatttttccgacccttagagagactttgaaag gtgaaaaaaactgacccttaccgtccgcacatacccatcatccatttttg cctaagtaccctccccccccGGGCTGGTGACCCTGtttttttCTTGGTGC ATAAGTCAGTCCAGCAAAGGGTCGAAACTAAGCTTCTACTTATGTACCCT GACAATATTGTCATCGGATTCGTTATttaactctacccttcgaacctact ttagagcacttacaaatcgattgtggtttcaaagcttcctggggaatttc ccttttttctcaatagactatatcggatttagataaatgcaatgcattct ggtttctagggattctcaaaggaattataatctattataattgatctatt ataattcctttgagagtccctagaaaccagaatgcattgcatttatctaa atccgatatcgtctattattaTGACCTTTGATTGTAGGCTTAAATAGTGG TAGTATTCGAGTATTTGTTTTGAGAACTATTTCCATCAATGATCTTTACC ATtgattttgtcgttttttttttgtttttttggtttcgctagtttttggt tcagttgttaaactttttttttggaaagatccATCTTTTGGTCTTTATCA ACAATCCTGTATTATTTTCTTCATATTTATTGGGATGATGTAGGCTTAAA TGGTGGTAGTATTCGAGTATTTGTTTTGAGAACTATTTCCATCAATGATC TTTACCATtgattttgtcgtttttttttgtttttttggtttcgctagttt tgggttcagttgttaaactttttttttggaaagatccATCTTTTGGTCTT TATCAACAATCCTGTATTATTTTCTTCATATTTATTGGGATGATGTAGGC TTAAATGGTGGTAGTATTCGAGTATTTGTTTGAGAACTATTTCCATCAAT GATCTTTACCATtgatttttgtcgtttttttttgtttttttttggtttcg ctagttttgggttcagttgttaaactttttttttggaaagatccATCTTT TGGTCTTTATCAACAATCCTGTATTATTTTCTTCATATTTATTGGGACAA TCCCAATTGTTAAAGCTGTAaag

Coding sequence (CDS) from alignment at sc0000094_pilon:24139..27011+

>MSTRG.12428.1.p2 ID=MSTRG.12428.1.p2|Name=MSTRG.12428.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=546bp|location=Sequence derived from alignment at sc0000094_pilon:24139..27011+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTTGGGCCAGGAGGAAAAATTTATCCTGCaaatcgccaaaattagttat
cactaaaataaatttctttaaagtaatattcatatttttttttatcttta
aagaaaattctttgatcAACACGATGTGTCATATGTGTTACAGCAAAACG
TATGATTTTGATGACCCAGAGTTCATCCATATAATGGGCTACATCAAAAT
GTCAAATGAAGGTCTAACACCTAACCAAGCCATATCGATTTTTCCTTGGC
TACAATATTTCCCTGACACCGAAGCactcaaaaaattgaaacttgCTGTA
AAACAAGACACAGAATTCACACGTAAAATGTTTGATGAACATATCGCAAC
TTTTGATCCTGAGAATATCAGAGATTTTACTGATAATCTACTTCATTTTT
CACAAAACAAAGAATTATGGAAAGATGCTGGTTTCGAGACAATCACTCGA
GAAGAAATTGAACCTGTGGTAAGTTCACATGTTCACTATTGTTTGCAGGT
GTGGAAACCCAAGCTGCTCTTTTACGTTGGCTCTTCCTCTACATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12428MSTRG.12428Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12428.1.p2.exon1MSTRG.12428.1.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12428.1.p2MSTRG.12428.1.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000094_pilongenomesc0000094_pilon:24139..27011 +