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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000093_pilon:1094245..1097492- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12409.1.p1 ID=MSTRG.12409.1.p1|Name=MSTRG.12409.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3248bp|location=Sequence derived from alignment at sc0000093_pilon:1094245..1097492- (Clytia hemisphaerica_ch_hm2_pilon)
TTTACAGAGTAGCCCATCTGGAGGCTTAGAATATATATATACAAACATAA
GATATTTATCATTGGTCTATATAGAAAATACTGGTGTCCTGTCTTTTGTG
ATTTATTTTTCTGAAGTTTATTTTCTATACATTGATTTTAACTCGCTTTC
AACACACAGGGTACAAGTTGAGCTGAAAAAACAAAAATTTCTTTCAACAG
GTTTCTTTAAACAATAAAGCTTGGGTTTCAAGTGAATAAATTTTTGAGTA
AAAATGTAATTTTCATTGTTTATAAGTCAGATGATGATGGCTAGTATTAG
GGTTTACGACAAATGAATTTGTGGAATAAAGAATTGATTTTAAACCACTT
AGTCAGATACGTGTAAGTTTTAATTGTTCTCTGGGTCTACACATTTGTTG
TGTATGTGGCATCTTTTGATGAAACTTGAGACCCGCTTTCATACGTATGG
CTAGTTTATGAGTTTACGACAAATGAATTTGTGGAATAAAGAATTGATTT
TAAACCGCTTAGTCAGATACGTGTAAGTTTTAATTGTTCTCTGGGTCTAC
ACATTTGTTGTGTATATATGTGGCATCTTTTGATGAAACTTGAGACCCGC
TTTCATAAAAAACTTTACGTATGGCTAGTTTGTGAGTTAACGACAAATGA
ATTTGTGGAATAAAGAATTGATTTTGAACCGCTTAGCCAGATACGTGTAA
GTTTTAATTGTTCTCTGGGTCTACACATTTGTTGTGTATGTGGCATCTTT
TGATGAAACTTGAGACCCGCTTTCATAAAAAACTTTTACGTATGGCTAGT
TTATGAGTTTACAACAAATGAATTTGTAGACAAATGAATATTTTGAAACT
GTTAATTCAATAAATATTTTCATGTTTTATTGGTCTTCTTTTTTTGCAAA
TACATCTTATGACAAAACTTGAGAAATGGCATGGGGGTTTGAAGATAGAT
CATTTTGAAGAAGGGCAATTGATGTATATAGGTGTTGGGCTATTTCTACC
ATTATAAAGTTTTTTGCACTGTCTGATGTTGAAAGACTTTGCTTTCTAAA
GTGACTTATAATTTTTTTTACACATTTTCAGCACTTCAATTGGATGGTAC
ATTCACTTTGCTGGCTCGGAATTAGAGCTGTAATTCCTAAAAAGTAAGAC
TTTTTTAATTTTTGTCTTTTCACAATAAAATTTTTTATTCCTTTCGAGAA
AATTGCTGTTTTTCTTTCCAATGTTTAATTTGATGTCTATTTCTTTTACT
GTTTAAGTCTTTAAGGAAAGTTTTTATATGATTTGGATAGCCATTTTATT
TTCCAAGTAGATGGTAATCAAACTTATTAATTTTTTTATAGGAGCTCCTT
TGACGATGCTTGGGTGAATTGATCAGTCAATATGGAACTCAAAATGGATG
AATGCAATACTACGAATGGAATAACGAACTAACAAAGTTGGTGGACTATC
ATCTTTTTCGAAATCTTGACGAACGCCAAAAACTCAGAAAGTTTTTCAAG
CCACAACCAAAAGAAATCTTTTTTTTAAATGACAATGAATTTTATCCAAT
TCGAAGAAGTCTTATTTTATTACCTTTTTTGCATTCCACAATATTTCTAC
TTAACCTTTCCCACTTTTTTGTGACTTTTTTCAGAACAAACTGCTGAATG
AGATGTTGGCAACTCAAAGGCGAACCAACATTCTCCTGGGCCAATTGATT
GCAAAGGTAATTTTTTTTCAATTTCTCAAAACAACTGGACAACTTTTTTA
CGCGATGATTTAACACAGCTACAAGCACATCCACGCTTTTCTAACTTGAA
CCTAGATAAATTTAAAACATGCATTATTTGTCTGTTTTTTGTAAATTTTG
CGGCAAGATAGAACATTGGTGTCACCATTCTTTTTTAGGTTTCAGAGCAA
CCATTACCTAATGCAAACCCAAACCTAAATCAAACACAAACGGCTCCTTT
AGATGAAAATGACTTTGTAAGTATCATTTCAACTTCTTTGTTTTTAACTT
CATATCCACTGAGTTTTGAATACTTAAAGGAAAACTTTTTGGATTAAGTT
CCCGTCAAATTTCGTTTTCATCATCAGAAGAAACTGCTAAAATTCTAAAG
CTCTGTGACAAACTGACTTGATAATTTTGAAAAAACTCTTGAGAAGGAAA
GAAAGACTTAATTTGTTTTGAGCGGGAGAAAATTATAATTGTAAAATTGA
TATTTTTTTTAGTTTGAATAATTTTTTGAGAGAGACAATTGTATCCTTTA
TCCTATCCTTTATTTACTCTCTATTTACTTTATGTATTTGTAACAATTTT
AATATGCAACTTTTAGCTTACACAAAGGTTTCTCGATAACTAAAATGTTC
CTTTTCGTTGCTTTCATTACTTTTTGCTTTATTTCTAATGTCTGAGTGTC
GCCGTGCTAGATTACATTTAAGTACTGTAGTACGGTTATCTAAAGCAATA
AAATTGTATTTTTAGGTTCTGGCAGATGGCTCCAACTTGTTAGATGTGCC
GAGACATAATACTCCTACAATATATGCCATTGCCTTGGCTAAGGCGATGT
TTACGACGGAAGAACTTGAAAATGGCATGGTCTCGCCTAAAGCAGGCAAA
AGGAAATCGAGGACTGTATTAGATCCTAATCAAGTCAAGAAAATAAAGCG
TAAATTGAATTATTTCATCCACCATGGGTTGACAAATACGATTTAACTTA
TTTTCAAGGTTTTTTGCTGTTTTATACAAATAAGTCATGTTAAGCCTGGG
AGCTCCTCAAAAAGTTATGCCTTGTTTTTGTTTTTTTGCCATAACTTTCA
ACTAGTTGTGATATAAAAAAATTTAAACTTTGTTTCAAAAAATTGGCAGT
CCGCACATTTTGGTTCATTGCTCTTGAAGGGAAAAAGACAAAACCAAAGT
TAGTAATACCTTATTGAAAAGACAATTTTGAATGGTAGAATCTAAGCTTT
AAATACTTTTTTAAAGAATTCGAAAATGAAAATAAAAACTTCGAGAGCAA
TCAACTAAAATGTGTGGACTGTCAATTTTTTTTGAAATTCGTTCATATGC
TTTTTTTACAGGATTGATTCAACACCAATATAAACTGGAGGAACCAAAGT
TCAAAAAAATTTGGCCTCATTGCCGGAGGTCCATCAACCAGGCTGGAAAT
GACGCCAAAAGAAAAGCTGACGTTGAAGATGAGATTCAAGAGAATAATTA
ATTTAAAATTATAATTGGTGCAAAGAAAAATTGTTTAATACAATCTAT Coding sequence (CDS) from alignment at sc0000093_pilon:1094245..1097492- >MSTRG.12409.1.p1 ID=MSTRG.12409.1.p1|Name=MSTRG.12409.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1824bp|location=Sequence derived from alignment at sc0000093_pilon:1094245..1097492- (Clytia hemisphaerica_ch_hm2_pilon)
GATTGATTCAACACCAATATAAACTGGAGGAACCAAAGTTCAAAAAAATT
TGGCCTCATTGCCGGAGGTCCATCAACCAGGCTGGAAATGACGCCAAAAG
AAAAGCTGACGTTGAAGATGAGATTCAAGAGAATAATTAAGTTCTGGCAG
ATGGCTCCAACTTGTTAGATGTGCCGAGACATAATACTCCTACAATATAT
GCCATTGCCTTGGCTAAGGCGATGTTTACGACGGAAGAACTTGAAAATGG
CATGGTCTCGCCTAAAGCAGGCAAAAGGAAATCGAGGACTGTATTAGATC
CTAATCAAGTCAAGAAAATAAAGCGTTTCAGAGCAACCATTACCTAATGC
AAACCCAAACCTAAATCAAACACAAACGGCTCCTTTAGATGAAAATGACT
TTATGTTGGCAACTCAAAGGCGAACCAACATTCTCCTGGGCCAATTGATT
GCAAAGGATTGATTCAACACCAATATAAACTGGAGGAACCAAAGTTCAAA
AAAATTTGGCCTCATTGCCGGAGGTCCATCAACCAGGCTGGAAATGACGC
CAAAAGAAAAGCTGACGTTGAAGATGAGATTCAAGAGAATAATTAAGTTC
TGGCAGATGGCTCCAACTTGTTAGATGTGCCGAGACATAATACTCCTACA
ATATATGCCATTGCCTTGGCTAAGGCGATGTTTACGACGGAAGAACTTGA
AAATGGCATGGTCTCGCCTAAAGCAGGCAAAAGGAAATCGAGGACTGTAT
TAGATCCTAATCAAGTCAAGAAAATAAAGCGTTTCAGAGCAACCATTACC
TAATGCAAACCCAAACCTAAATCAAACACAAACGGCTCCTTTAGATGAAA
ATGACTTTATGTTGGCAACTCAAAGGCGAACCAACATTCTCCTGGGCCAA
TTGATTGCAAAGGATTGATTCAACACCAATATAAACTGGAGGAACCAAAG
TTCAAAAAAATTTGGCCTCATTGCCGGAGGTCCATCAACCAGGCTGGAAA
TGACGCCAAAAGAAAAGCTGACGTTGAAGATGAGATTCAAGAGAATAATT
AAGTTCTGGCAGATGGCTCCAACTTGTTAGATGTGCCGAGACATAATACT
CCTACAATATATGCCATTGCCTTGGCTAAGGCGATGTTTACGACGGAAGA
ACTTGAAAATGGCATGGTCTCGCCTAAAGCAGGCAAAAGGAAATCGAGGA
CTGTATTAGATCCTAATCAAGTCAAGAAAATAAAGCGTTTCAGAGCAACC
ATTACCTAATGCAAACCCAAACCTAAATCAAACACAAACGGCTCCTTTAG
ATGAAAATGACTTTATGTTGGCAACTCAAAGGCGAACCAACATTCTCCTG
GGCCAATTGATTGCAAAGGATTGATTCAACACCAATATAAACTGGAGGAA
CCAAAGTTCAAAAAAATTTGGCCTCATTGCCGGAGGTCCATCAACCAGGC
TGGAAATGACGCCAAAAGAAAAGCTGACGTTGAAGATGAGATTCAAGAGA
ATAATTAAGTTCTGGCAGATGGCTCCAACTTGTTAGATGTGCCGAGACAT
AATACTCCTACAATATATGCCATTGCCTTGGCTAAGGCGATGTTTACGAC
GGAAGAACTTGAAAATGGCATGGTCTCGCCTAAAGCAGGCAAAAGGAAAT
CGAGGACTGTATTAGATCCTAATCAAGTCAAGAAAATAAAGCGTTTCAGA
GCAACCATTACCTAATGCAAACCCAAACCTAAATCAAACACAAACGGCTC
CTTTAGATGAAAATGACTTTATGTTGGCAACTCAAAGGCGAACCAACATT
CTCCTGGGCCAATTGATTGCAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000093_pilon | genome | sc0000093_pilon:1094245..1097492 - |
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