MSTRG.12383.1.p1 (mRNA) -

Overview
NameMSTRG.12383.1.p1
Unique NameMSTRG.12383.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000093_pilon:703178..705249+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12383.1.p1 ID=MSTRG.12383.1.p1|Name=MSTRG.12383.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2072bp|location=Sequence derived from alignment at sc0000093_pilon:703178..705249+ (Clytia hemisphaerica_ch_hm2_pilon)
CCACCTCAACCACACACGCAAACAGTTCAAAATAAGGAGATTTGCCGTCA AGACAGTTTGACCTCAGTGCGAGTAAACTTTGAACCACAGACAAACACGT TTGGTactaccaaaaatcaaaacatcatgcatgtgaaattgttttgttta gtATTCCTGATGCTTGCTTTTGTGATGACAAATCGTAAGTGTTATTAATA TCGCTGTTAATAAGCTTGATCACAGAAAAGGATTTATCTGCAAAACGCCT ACAcgtgttttgtataagaacatccgagattttttaagccttcagaTGAG CTACATTACATATTCCTGGTTCTTCATATAAACAATGTATTTTTCCCTCT GATTGAAATGGGgtaagtgaaaaattatattttccttaaaaatttcAGGT GATAGAGAAAGCAGCCAATCAAACAAGATGGTAGACGGAGCACCGAACCC TGACCCATATCACGACGAATTTATGGAAGACAATGAAATATTGCACAGAA AAGGTAAATATTCAGcctactttaaaaagtttccCATCCATTTTCCTTTT ATCTGATATTTTGATggtggattggcggccgcctACGCTAGAGCTCCGAA aaagcgggccaatttcccattggagaggaatgatagtcagcccttgatgt gccgcatccccagtcggaTTCAACTACCCTTCCTTGCGTGTAAACCTAAA GATATtttggttggacccgccaatccccgaaaacgagggctgggctacct tcatttttcaaccgaccaataactttacaaaaacgtcaaaaagttttcgc tcatgtcgcgcgaaagtggatacAGGCCTTTACAAATAATAGGCGACAGT TATATCACTTTAGAATGTTAGATCAATTAAAACTGTTCAAAAATTACAca ttcacatttttttataagaacaaactatataagatcaTAAGGCtttgctg gccaaaatgttaagagcaagttaagaacattttaaggatttgtggactca aaaacaccctatttcttatgtagatggtcaaaataagaacatgtatagaa cattttttgggcttaaaactcaaaaagttaagaacatacgaaggcttcaa aaattttggatgttcttacaaagaAATTACATATACCGGGTGCTCCATGA CGTGGAaaataagatggagaaactgttggcaagatataaataagaaaaaa agaataaaaaaaacaataaaattgtgttcttgtcattttgtcttatttat ttcaatgattttttgaaatttcgacattaaaaaaaagtcagtttttttta aaataactttcgaactacctTTCCAAACCTAATGTATAATAGctaaaaat tcaagttagagcatcctctatacaataaaaaaagaatgaacaaaaaattt aaatcctgatgctcacaatatctcgacaaatctgtatacttttttttggt gcacccggtatactTTTTAGGGATTCCCTAAAGTTTCTTGACCTATTTGG AATAACGGTACATTTCCCTTGGTTCGTTTTAGGTATACAAATCGCTGCAT CTTATAGACGAAGAGGAGAAGGCGGCAAGAAATGAAGCAAATACAAGGAa tattttaaccctttaactgccgttcgtTTTATTTAAGGGTTCGAtctatt tgccagatgtcggcatatgccgttATGAGCGACCAGGAGTTTACCATCAT ATTTAGCTTTactttctgaaaaatatcagaaGTATAAGTGATATGCATtt actttgagttgaaaaatgtataattatgaaaatcatcttcgaaatatatt ttgattattCAACAGTGCTATTTAATGAAATCTAGTTCAAAATCGAACCT TCAAAACGTaaaaaaaCCTCTGGCAAATAGGTCAAGAACTCTCTTTTCGG CAAATGCCGACACCGGCAAAGAAGTCGAAAATGCTCTTGTCGGCATTGAA AAAGTTATCAATGTAAACAGTTTTAATCCTTTTCTAATATTAAAGGCAAA CAGGGATAATTaattatgtaaaaaaatatttaaatacttcattctttGAA AGGGGCCAGGTTTAGTTGCGTC

Coding sequence (CDS) from alignment at sc0000093_pilon:703178..705249+

>MSTRG.12383.1.p1 ID=MSTRG.12383.1.p1|Name=MSTRG.12383.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1026bp|location=Sequence derived from alignment at sc0000093_pilon:703178..705249+ (Clytia hemisphaerica_ch_hm2_pilon)
CCACCTCAACCACACACGCAAACAGTTCAAAATAAGGAGATTTGCCGTCA
AGACAGTTTGACCTCAGTGCGAGTAAACTTTGAACCACAGACAAACACGT
TTGGTactaccaaaaatcaaaacatcatgcatgtgaaattgttttgttta
gtATTCCTGATGCTTGCTTTTGTGATGACAAATCGTGATAGAGAAAGCAG
CCAATCAAACAAGATGGTAGACGGAGCACCGAACCCTGACCCATATCACG
ACGAATTTATGGAAGACAATGAAATATTGCACAGAAAAGGTATACAAATC
GCTGCATCTTATAGACGAAGAGGAGAAGGCGGCAAGAAATGACCACCTCA
ACCACACACGCAAACAGTTCAAAATAAGGAGATTTGCCGTCAAGACAGTT
TGACCTCAGTGCGAGTAAACTTTGAACCACAGACAAACACGTTTGGTact
accaaaaatcaaaacatcatgcatgtgaaattgttttgtttagtATTCCT
GATGCTTGCTTTTGTGATGACAAATCGTGATAGAGAAAGCAGCCAATCAA
ACAAGATGGTAGACGGAGCACCGAACCCTGACCCATATCACGACGAATTT
ATGGAAGACAATGAAATATTGCACAGAAAAGGTATACAAATCGCTGCATC
TTATAGACGAAGAGGAGAAGGCGGCAAGAAATGACCACCTCAACCACACA
CGCAAACAGTTCAAAATAAGGAGATTTGCCGTCAAGACAGTTTGACCTCA
GTGCGAGTAAACTTTGAACCACAGACAAACACGTTTGGTactaccaaaaa
tcaaaacatcatgcatgtgaaattgttttgtttagtATTCCTGATGCTTG
CTTTTGTGATGACAAATCGTGATAGAGAAAGCAGCCAATCAAACAAGATG
GTAGACGGAGCACCGAACCCTGACCCATATCACGACGAATTTATGGAAGA
CAATGAAATATTGCACAGAAAAGGTATACAAATCGCTGCATCTTATAGAC
GAAGAGGAGAAGGCGGCAAGAAATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12383MSTRG.12383Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12383.1.p1.exon1MSTRG.12383.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12383.1.p1.exon2MSTRG.12383.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12383.1.p1.exon3MSTRG.12383.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12383.1.p1MSTRG.12383.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000093_pilongenomesc0000093_pilon:703178..705249 +