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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000093_pilon:620106..625289- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12377.1.p1 ID=MSTRG.12377.1.p1|Name=MSTRG.12377.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5184bp|location=Sequence derived from alignment at sc0000093_pilon:620106..625289- (Clytia hemisphaerica_ch_hm2_pilon)
GTTTGTTCTTATAAAAAAAAGAGGATTACAAAAGAATAAAACACCATGGC
ACAACGAATCAAAACGCGTATCAAATTCCGTTTTATGAGTATGTTTACAC
CTTCCATGAAACCTGATGATTTTGATTTCATTGAAAAGAAGAAAGAGAAA
GTCAAAGAAGAACCAGTCAAGAAATTATTGAAAGGAAAACAAGAAAAAGT
CTACAAAGAATTGTCGAAAAAATGTACCACTGTTGAAGCTGAGGTAAGAA
AACTGACCCACATTGAAACCAAAAAGTCTACAAAGAATTGTCTAAGAAAT
GCACCACTGTTGAAGCTGAGGTAAAAAAACTGACCCACATTGAAACCACC
ATCTTTGATCGGATTCTTAAAGAAAGTAGTACTTCATTGGTTACACTTAA
TTCGACGTCTTATGATCTTCAAGCAGGTCCTAATTACTCCACGTATGACA
CGTAAAGGTCATGGTCTGTAAGAGAATCTGCCCAGGTTAGCAGAGCGCTT
TGAATTCAGATTTGGGATGAATATTGAATAAGGTTTTGACCAGATTTAGA
TAACCCCATGCCACATACCTATAAGGCTGAGCGTGGTACGTCCATGTTTA
GGCCCGTAGGAAGCATTTTCTTTTTGAGGGGGCAAAGTGAGAAATATAAA
CCGAGGGCCAACCGATTTGGCCCGAGGGAAAAACTTCGCAATTTAGGGTG
TCTTGATCGCTGGAAAACGCATCTAGTTAAAGGATTATGTTCAAAATGAA
GCCATTAATACAAGATTTTTCTAAGCTTTCAACTTTTTTTTTGGGGGGGG
GGGGATTGGGCAATGTTCTTGTGCCCCCCCCCCCCCCCGGTTGCTACGGG
CCTGTATGTTACACGTTTCTTTTATAATTTTCCCCATTTTGGGAATATTT
TTGTCCCATTCTCCTAAGAAATAGGACCATAGGAACATCAGATAACCTCA
ACAACACATCTCACATTAAAATTTCTTTAAAAAAACAACCCAATTCCATG
ATTTTTTTCTTTGGCACAGGTTTCAACGAACGAGGAGAAAGTACGAAATA
CTTCTCAGCCTTACATTCTTCCTACATCCACAACGTCCAAATTACATTCA
AAAGACATCCATCAAATGGCAGGTGATGGGAAATTTAATCAAGTCAAACG
CATGTTACAAAATGGATTTCAGGTATGCAAACTGGTCCGGTTTTTTTGAG
TGCAAAAATCCAGGGTGGTCTGGTTTTTTGAGTGTAAAAATCCAGGGTGG
TCCGGTTTTTTGAGTGTAAAAATCCAGGGTGGTCTGGTTTTTTGAGTGCA
GAAATCCAGGGTGGTCTGGTTTTTTGAAAATCCAGGGTGGTCTGGTTTTT
TGAGTGTAAAAAATCCAGGGTGGTCTGGTTTTTTGAAAATCCAGGGTGGT
CTGGTTTTTTGAGTGTAAAAAATCCAGGGTGGTCTGTTTTTTTGAGTGTA
AAAAATCCAGGGTGGTCCGGTTTTTTGAGTGTTGAGTGTAAAAAGTCCAG
GGTGGTCCGGTTTTTTGAGTGTAAAAATCCAGGGTGTCACCTTTCCTGAA
AAAAACCTCCTCAACATAGGGGGTACAAATTTTTTCTGGAATAGCCCATT
TCTGCCACGCAAACCCCAAGATAAATTTGATCGATAACATGTTTGCAAAA
AAAATAAAAATCTGACAAAAAAAATTGCAAAAATGTCAAGAAAAAAAAGT
CCCACATAGATGTCGAGTTAGAGGGTCGAACTTTTTCTATTCACTTAAAA
TCTGAATGAAAGATTCAAACATGTTACAAGCAGAAATTTAGACCATATAT
TTCTCCAATTAAATGTAGAGTTAATCTTATCTTATTTAAGCAAATAACTG
GGTGGCAAATATCTTGACGTTGTTGAGGCAGAATTAAACCACCGTAGCAA
ACAGATATATTCTTTTACACACTAGATGGGGTAACTGCTCATAGATTTCC
CGTGGAAGTGTGTCCAGTTTTGAAGTCGACTATCTATTCCATCGTGTTGT
TTTTTGTTTTACGAACTATTCGAATTTCTAAACTGCTGTTGGCGACCAGA
ATTAAAAAAAAGGCTCTAAAACTGGACACGCTTACTTATATATGGGTATC
CCGACCCAGTCAAGTAGTTCAAGATCAGTGGGTATGGTAGAAAAACTTTT
TTTAAGACAAAGAAAACACCATTTACAGGTCTTTCGCTCACGTCTTTCTT
AAAAGTATGTGGACGTTTTAAATTTTGAGTATTTTCTTAGCACCCATTCA
TGCTATGTTTAAAAGTTATACACCGTTGGAAAGATATTTCCAAGGAGAAC
AATCTAAAGAGTAAAAATTGAAACATGAAGAAGAAAAATGAAGATTTTTT
CTACTGGTTCAAAAATCATGACATCAAGCTATTTTATCGTATTTAGAAAA
TTTAAACCTTGCTGATTTCAAATAAGTGTGTTCAGTCTTTTTATACTTTT
ATAAGAAAAAAGTTACATCACTGTAACACAGATTTGCAATCAGAAGGTTC
AAATATTCTAAAAAAAAATCAAACCAGAATTTGCTCGTTCTTATTAAAAA
ACGTGCATAACAACTTATAGTCTGAATCGCAGACCTCTACAAAACCACAG
GTAGTATAGGTCTGCTTAATGATCTACCAACCGCTTTCCGGTTCGCAAAG
GAAATCTTGGCGAGTAATTTGATTGACATTGATGTGCGCGCAAAAACGAT
CGTTTCGAACGTTTTCAATGGAATGTTTACATTTGAAATTCGAATCCCAG
ACCAGAAAAAAAAAACAGAAAAAAGATAAAAAACAATCTGATGCGCGCAT
TATGTACAGTCTGTAGATTTATTTTTGACTTTTGCTTTTATAAGATATCT
GGTCTGTAAATTTATCAAAACTTTTCCATCAGCTCTTCGGTCGAAGCTCA
AAAAATACAAATATGCACACAAAAGTGAAAGAAAACAACCAGAAACACTC
CAATCTCTTCAAAAAATTGGAGCTAAGTACCTGAAAAGATACAAAGGCCA
CACAGTATTAAAAAGTGAAATGCCAAAGCTGAAGAAAAGTTCTTTGTTTG
TTTTAACATTTAAAGGCCCTTGTTGAAGGAACAACAACACTCCCTTTAGG
CTACATTCCCTTTTGTAGCATCATAAAGAAGTAACGTCAGAAATATTCAA
TACGACCCCCAAAATGTACTGTATATACATAACTAGAATACCTTGAAATA
ATCTGCAACATATCTGTAGAACTGACAAAACAATTATCTGGAGCCAAAGT
GATCAACGAATCCAGTGTGGTAAAAAATTATACACTCATGCAAGTCCAAA
TTAAAGCATCAAAATGTAGTTTTATGAAGCAAAATTTTGTTGGTGCACAC
AGAAGATACATCAAGGCAGTTAAATTCAATAAATCTAATTTTTCATCTTT
TACAAAATCTCCACATTAAACAAGAAAGGAGGAAGAAAAACAAGCAAACT
TCCTTCCGCCTACTTTTTTTTCAAAATCCAAATATATTTTCCAATCTATG
ATTTGGTGCCTCACAGAAAATTTAAACATTACGTAATGTTATATTTGTAG
ACACTCGCCAGCTAAAAATGTCTTTAGCCGTATATCGGCTAAAGGCGGCA
AATCTCTGGACAAAGGAAATATAGCTTATTAAGCATCCTCTATAAGGAGC
ACGAATCCTCCGTTAGTGGATGCCAGCAGCCTAAACAACTTACGACTTTT
GAATATATAACGCTGGCCCCTTTTACGCCGGCCCTTATTACGTCACAGTC
TAATTTCGAGCTTACGTCAATTTATAGGCCCGTTAATAACGCCAAAATTT
GTAAAAATTTATTTAACTTTGAATTTCCTAGCTCTACGTATTTTAAGCAA
TTTATATATTGTAACGTTTTAATTTAATATTTAATTACTATTAAAAAAAA
AAAAAAAAAAAAAATTGTAAAAATGGCTACTTATGCTTCAAATTAGTAAA
CAATGACGAAAATTTACATTAGAATGTTACTTTTTAGTATTAAACTGTTG
AAAATTTCATCGAAAATAACTGATTTTTAATTATGTTAAATATTTCACTG
AAGTATTAAATATGGAGTAAAACAATGGATAATTTTCGTCTTCGAATCAT
ACCTAAAATCCTTTAAATTGAGAAATAATGATAAAAAATTAACACCGCTT
TTAGGTTAAAATTGAAAAATCTTGGCCCTTTTTACGCCAGCCCTTTTAAC
GCCGGCCTTTATTACGCCACGAGCCTAAAAATAACGCCAATGAGAGCCGG
TGTAAAAAGGGCCGATAAGGTATTCAATAAAGAATGATCAGTGGATCAAT
GGAGGCAACTATTGTTCGTGAGGTATTTAATGGTAAGAACCTAAACAGAA
AAAACTTGGTCCTCCTTTTCCCACATAGAGAACCTCCATTGATTCATTTG
ACTTTCTTTTATTAATTTAGAAAACAAAAATTTGAAAAGTTTTTGGCACC
GTAGAGATAATATAGTTTACAGGGATCTTCAAAACTAAGTTACTAAAGAT
TTTAAGCCGTCCTATTCCAAACGAAAACTATAGTTCAAAGTCTGCAATTT
TGTTTTTTTTCTCGTTCTCCCCCCAGGTTGATGCTTTAGACGAAGAACGG
AACACACCTCTTATCTACGCATGTCACCACGGTCATTTCCAAACTACCGT
CCTCTTAATCAAAAGCGGCGCTAACGTCAACCACCAATCTAAACATGGCT
ACACCCCGCTCATGTTTGCATGTTGGGGTGGGCATTTTGAAATCGCCTCG
CTTCTAATCAAACACCATGCCAACGTCAAAACAAGAAATGTAAACAGAGA
CACAGCGTTACATTTTGCCGCCCTTGGAGGCCACCCAATGATGTGTTTGC
TATTAAGACGCGAGGGCGCCGATGCAAACGCCCGTAACGCCAAAAACAAA
ACTCCATCTGATCATATGAAAACACACGTGGCAGAATTGGAGGCCGCCAT
ACAGGTCAAGCTCCGCAAAGAAGTAGATTTCATTCGGTCGAAGAAGTTGA
TTGGATTGCACAAAGTTTCAGAGGAGTACTGTCAGTTCATGAGTAGATAA
ACAGAATGGAAGACTCACAGAAGGATATACCATAGTCATTATAAAAAACC
CCGGTCTGGCAATGGGCTTTTCCAGAAATAGTCCGTGCCCCCTGTTGAGG
ATATCAGATAGCCAGGGGGTTAAAGATTTCTGTT Coding sequence (CDS) from alignment at sc0000093_pilon:620106..625289- >MSTRG.12377.1.p1 ID=MSTRG.12377.1.p1|Name=MSTRG.12377.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2475bp|location=Sequence derived from alignment at sc0000093_pilon:620106..625289- (Clytia hemisphaerica_ch_hm2_pilon)
GTTGATGCTTTAGACGAAGAACGGAACACACCTCTTATCTACGCATGTCA
CCACGGTCATTTCCAAACTACCGTCCTCTTAATCAAAAGCGGCGCTAACG
TCAACCACCAATCTAAACATGGCTACACCCCGCTCATGTTTGCATGTTGG
GGTGGGCATTTTGAAATCGCCTCGCTTCTAATCAAACACCATGCCAACGT
CAAAACAAGAAATGTAAACAGAGACACAGCGTTACATTTTGCCGCCCTTG
GAGGCCACCCAATGATGTGTTTGCTATTAAGACGCGAGGGCGCCGATGCA
AACGCCCGTAACGCCAAAAACAAAACTCCATCTGATCATATGAAAACACA
CGTGGCAGAATTGGAGGCCGCCATACAGGTCAAGCTCCGCAAAGAAGTAG
ATTTCATTCGGTCGAAGAAGTTGATTGGATTGCACAAAGTTTCAGAGGAG
TACTGTCAGTTCATGAGTAGATAAGTTTCAACGAACGAGGAGAAAGTACG
AAATACTTCTCAGCCTTACATTCTTCCTACATCCACAACGTCCAAATTAC
ATTCAAAAGACATCCATCAAATGGCAGGTGATGGGAAATTTAATCAAGTC
AAACGCATGTTACAAAATGGATTTCAGATGGCACAACGAATCAAAACGCG
TATCAAATTCCGTTTTATGAGTATGTTTACACCTTCCATGAAACCTGATG
ATTTTGATTTCATTGAAAAGAAGAAAGAGAAAGTCAAAGAAGAACCAGTC
AAGAAATTATTGAAAGGAAAACAAGAAAAAGTCTACAAAGAATTGTCGAA
AAAATGTACCACTGTTGAAGCTGAGGTTGATGCTTTAGACGAAGAACGGA
ACACACCTCTTATCTACGCATGTCACCACGGTCATTTCCAAACTACCGTC
CTCTTAATCAAAAGCGGCGCTAACGTCAACCACCAATCTAAACATGGCTA
CACCCCGCTCATGTTTGCATGTTGGGGTGGGCATTTTGAAATCGCCTCGC
TTCTAATCAAACACCATGCCAACGTCAAAACAAGAAATGTAAACAGAGAC
ACAGCGTTACATTTTGCCGCCCTTGGAGGCCACCCAATGATGTGTTTGCT
ATTAAGACGCGAGGGCGCCGATGCAAACGCCCGTAACGCCAAAAACAAAA
CTCCATCTGATCATATGAAAACACACGTGGCAGAATTGGAGGCCGCCATA
CAGGTCAAGCTCCGCAAAGAAGTAGATTTCATTCGGTCGAAGAAGTTGAT
TGGATTGCACAAAGTTTCAGAGGAGTACTGTCAGTTCATGAGTAGATAAG
TTTCAACGAACGAGGAGAAAGTACGAAATACTTCTCAGCCTTACATTCTT
CCTACATCCACAACGTCCAAATTACATTCAAAAGACATCCATCAAATGGC
AGGTGATGGGAAATTTAATCAAGTCAAACGCATGTTACAAAATGGATTTC
AGATGGCACAACGAATCAAAACGCGTATCAAATTCCGTTTTATGAGTATG
TTTACACCTTCCATGAAACCTGATGATTTTGATTTCATTGAAAAGAAGAA
AGAGAAAGTCAAAGAAGAACCAGTCAAGAAATTATTGAAAGGAAAACAAG
AAAAAGTCTACAAAGAATTGTCGAAAAAATGTACCACTGTTGAAGCTGAG
GTTGATGCTTTAGACGAAGAACGGAACACACCTCTTATCTACGCATGTCA
CCACGGTCATTTCCAAACTACCGTCCTCTTAATCAAAAGCGGCGCTAACG
TCAACCACCAATCTAAACATGGCTACACCCCGCTCATGTTTGCATGTTGG
GGTGGGCATTTTGAAATCGCCTCGCTTCTAATCAAACACCATGCCAACGT
CAAAACAAGAAATGTAAACAGAGACACAGCGTTACATTTTGCCGCCCTTG
GAGGCCACCCAATGATGTGTTTGCTATTAAGACGCGAGGGCGCCGATGCA
AACGCCCGTAACGCCAAAAACAAAACTCCATCTGATCATATGAAAACACA
CGTGGCAGAATTGGAGGCCGCCATACAGGTCAAGCTCCGCAAAGAAGTAG
ATTTCATTCGGTCGAAGAAGTTGATTGGATTGCACAAAGTTTCAGAGGAG
TACTGTCAGTTCATGAGTAGATAAGTTTCAACGAACGAGGAGAAAGTACG
AAATACTTCTCAGCCTTACATTCTTCCTACATCCACAACGTCCAAATTAC
ATTCAAAAGACATCCATCAAATGGCAGGTGATGGGAAATTTAATCAAGTC
AAACGCATGTTACAAAATGGATTTCAGATGGCACAACGAATCAAAACGCG
TATCAAATTCCGTTTTATGAGTATGTTTACACCTTCCATGAAACCTGATG
ATTTTGATTTCATTGAAAAGAAGAAAGAGAAAGTCAAAGAAGAACCAGTC
AAGAAATTATTGAAAGGAAAACAAGAAAAAGTCTACAAAGAATTGTCGAA
AAAATGTACCACTGTTGAAGCTGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000093_pilon | genome | sc0000093_pilon:620106..625289 - |
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