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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000093_pilon:441581..446237+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12365.2.p2 ID=MSTRG.12365.2.p2|Name=MSTRG.12365.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4657bp|location=Sequence derived from alignment at sc0000093_pilon:441581..446237+ (Clytia hemisphaerica_ch_hm2_pilon)
GGCCCGTGTCCCTCTTCAGGGAAAACGATTGATGTAAACTTGCCTTTTGC
CATTAAACTAATACCCTTTAATATGGAGGAGGCTTGGATACCTGCAAGGG
GAAGCAACCATCATGGAGGACCCAGACACTGTGAGAAAGATGTCACGTAT
AGCGCCCTAACCCCAGTGTCCCCGCCCAACCACGGACCCGGCCACGGAGG
AGGTCAAGGACACACCCCGCAATGACGGGAAGCCAGCCCAGCCTAACCCC
AGACCCGGCCACGGAGGAGGTCAAGGACACACCCCGCAATGACGGGAAGC
CAGCCCAGCCCTCCCACAGACCCTGTGGTGGAGGAGGTCTCTGAGGACAC
GCCCCGCGCCCACGGGGAGCCAGCCCAGCCTACCCACAGACCCGGCCACG
GAGGAGGTCAAGGACACACCCCGCAATGACGGGCCAGCCCAGCCTACCCA
CAGTCCCGGCCACGGAGGAGGTCAAGGACACACCCCGCAATGACGGGCCC
TTTATTGAAAGGGAAAAGGGAATAATTTGGATCCCCAAAGCTGCATAATG
CTATCAATTCTAGCCATTGgtaacttcaaaaaaaaaacttgttattGGTC
GTACCTCCTTTACAGTCAACTCTATCCTGGCCTTTTCTACTACATGTTAG
CCAGTTGTGGGGTGCCAAATATAATTCCTTGATAACTTGAGAATTCTTGC
CTTCGTCTAAGTCTTGACCAGCTATCTGTACAACTGATGCTCTACTTGTG
ATAATGACTCGATAAAAACATACACACCCTAGGAACCATATAGGAACAAA
AGAAcatataatagaaaaaaaaatattatcttataaattaatttgatttt
ataCTTAAATCTATCGAAAACGATATGAAATACTTAAACTTATATATGAA
ATTGACGTGAATCAAGAAATCATTCTTGCGTCATGATTTATTACTGTTTA
ACTAGGCCCATACCCCACTCTAGGAAAACAATATATGTAAACTTGCCTTT
TGCCATTAAACTAATACCCATAAATATGGAGAAAGCTTGGATACCTGCAA
GGGGAAGCAACCATCATGGAGGACCCAGACACTGTGAGAAAGATGTCACG
TATAGCGCCCTAACCCCAGTGTCCCCGCCCTACCACGGACCCGGCCACGG
AGGAGGTCTCTGAGGACACACCCCGCAATGACGGGAAGCCAGCCCTGCCT
AACCCCAGACCCGGCCACGGAGGAGGTCACTGAGGACACACCCCGCAATG
ACGGGAAGCCAGCCCAGCCCTCCCACAGAACCTGCCACGGAGGAGGTCTC
TGAGGACACACCCCGCAATGACGGGGAGCCAGCCCAGCCTACCCACAGAC
CCGGCCACGGAGGAGGTCACTGAGGACACACCCCGCAATGACGGGCCAGC
CCAGCCTACCCACAGTCCCGGCCACGGAGGAGGTCACTGAGGACACACCC
CGCAATGACGGGCCCTTTATTGAAAGGGAAAACGGAATGATTGGATCCCC
AAAGCTGCATAATGCTATCAATTCTAGCCATTGGTAACTTCGTAAAACGT
GTTATTAGTAGTGCCTCCTTTACAGAAACTCCAAGCAGGATCTTTTTACT
AGCCAATTATGGTGCCAAAAGTGATTTCCTGATAACTTCAAAAGTCTTGC
CTTCTTCCCAAGATTTGACCAGCTATCTGTACATCTGATGCTCTACTTGT
GATAAGGACTCGATAAAAACATACACACCCTAGGAACAATATAGTAACTA
ACAAAAAGAACatataatagaaaataaaatattattttataaactattta
gatattatacctaaatatatCGCAGACGATATGAAATACTTAATATGCAT
TTTAACTTGCCTCTGGTCTGCAACATGAGGCGTCCATACAGCCTTGTTGA
CAGGCTATGTAAACCATCTAATCAATGCCGATTGTTTATTATGTACTGAT
CACGATCCTTCTTTATGCTTCTATCTAAAACCGGATCATTCTCAACTTGC
CGCTCACTGCAACTAGGATACATAGCCTTCTCCAAATTAACCTTTGTCAG
TCGACTGACAGAGAACTTCCGTACATAGTTGTGTAATACAATATCTAAAT
TAATATAAATGCCGTAGAAACCGACTCTAATTTGACGTGCACTGTCTGTG
TACAACCTTGCCTAGGTTGACACCAGCCTTCAAGCCAAGAAGATCACTct
actgtaaaaatttttcaattaaccGGGTCGCATATTTTTGGTAacgtgaa
ataaaataaaatattccgGTTTTGTGTTTGATTATCACATCGAGTTGAGG
ATAAGTTTATGctaataaaaagttgaaaaatttgtttgtaaactatctga
agtaaaaaagtaaaagaattttttctcttctttatcGTGTTTTATAAGCG
TAAGCGCTGTTCAAGAAAAGAATTCACAATTCACTGCAAATATTAAATCT
TATAAAAGAGAGCAGCTGTGCCTTAGAGGAGTAACCTAGATTAAGTGAAT
GGGCCTTTTGTTTGAgctaagaaattttaaaagcaaaaagagagaatttt
gaaataattgatgTTACGTTTCGTAGagaaaaatttgtgtttttatggtg
tttttactttttgttttgatttcatcttcaacggccaaaatgataataaa
aaattttcctgtttttgcGAGCCCCTTGCGCAACACCGAAAACCTAATTC
GAAAAGAAAATATGTTAAACCAAATTCAATCCAATACGcaaacaatcaaa
atcttgTAGAGTTCATAACTATTATATTGCAAGTTTTTTGTCCTTCTTCT
TCCACTTCGCTCCAAGCCACCGAGCCTTATGATAGCCAAAGACAATACAA
TAAGCTATTACAGCCTCAATGACCCCAAATGTCCAGCGACAATCCCTAAA
CGACCAGCGGcaatcaccttggccaacatcCCCAAAACCACTGAcaatca
ccttggccaacatcCCCAAAACCAGCGACAATCACCTTGGCCAACCTCCC
CAAAACCAGCGACAATCACCTTGGCCAACCTCCCCAAAACCAGCGAcaat
caccttggccaacatcCCCAAAACCACCGACAATCACCTTGGCCATCATC
TCCAAAAAACCAGCTACAATCACCCAAGCCAGATATTAGTTGCAGATTTT
GCTATGCACTTGATAAAATCTTAATGGTTCGtttcataaagtttttcaaa
gaatcTGGTCTCCTTCCGTTCGTATGCAACAAAAATTGTACGCTTCATTT
CACAAACTACTTTTGTATCTATGAATGTCCATCCTCAAAATCTCTTTGCG
TTCGGTAAAAGTGATGGTTATGAATTAACCCGAAGAGATATCGGAAgatt
caataaaaatatttcatcctgtcagctttcagttagagcgtcgactTGAA
CAGGGAGTTGCGATAGCCATTATGAATATGACGTCACGTGGttattagca
aagtagactcagttggcagagggcggccacccagccattcCAATACTGTg
gcgcttatcaaataaaagttaaaccacgatttaacctgtgttaaatccaa
atttgggtgaaaagtAATATTATATTCTATCAAATGATAATTTGAAGTTT
AAATATTTAGAACtcatttttcattgaaagtGACACAAGTGTGTtcgaaa
atttgatttgattgtcatTTTTCAACGAATACTTCAATATTAACAAATAA
tacaccgttgaaaagataattgagAGCACtataatttcaatttgttttaa
TCAAGAATTAACTCCACCAAAATAGTCAAAGAAACTCTATGCTGtaacaa
caaaaaataataatatataatgcgaataaaataaccctccgtgcctgcac
atacctaaataaaaaattaccaaattcTTCCGTTTATTATTAATAATAAA
ATTTACATCTAACGAATAAGACTtctatgtatgtgtgtttgtgtgAACTT
GATACAGGCGttcaataaatattaaaaaaataaattcagttTTCCCCTAA
AACTAATAAATGGTCTCCTAGACTTTGATTTGAGATTTGAATACACTGAA
TAGCAAGAGCAGAACCCCATTCCATTCAATTTCCTTTGCCATGCTATTTT
CTTGCTTTCCAAATCTATACGTACTCTTAAGTTCCAAATAACTCCCcgtt
tttcaacgttcatttaacgctTTAATAACTTTTGGGGGGATCTAATTGCC
GGGGAGGGGGacgttggaaattgtacttctgaaaacccaaaaataagata
aacatatactaaaatcaggctatttagagcaaaataaggggccttctctt
tgacagctgaaaatattaaatataaaaaaacgggggggggtcctaataag
gtccggggtgctgaaaatgttcgaaaaattaacaagcgaggTgggggggg
gCAATTTATTTGGAACGTAAAAGTAAACTCAAGttgaaaagcattttttg
aacgATAATTTGTCATTGATAAAAAACGAACATAAGATCTTGTCACTATT
TTTGCTTGTGTACAATTGAGAGTATCGCAAATAGTAAGGTACTGTTCAAA
AATAGCAGAAATGTGTCCTACCTTCCAAAAAGCCTCATATGAAGCGCTAT
ATGAActttgaaaaaacgttgtgagCTGCCTTAGGAGTAGTaaaaaaaCA
ACAGATC Coding sequence (CDS) from alignment at sc0000093_pilon:441581..446237+ >MSTRG.12365.2.p2 ID=MSTRG.12365.2.p2|Name=MSTRG.12365.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=480bp|location=Sequence derived from alignment at sc0000093_pilon:441581..446237+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATAGCCAAAGACAATACAATAAGCTATTACAGCCTCAATGACCCCAA
ATGTCCAGCGACAATCCCTAAACGACCAGCGGcaatcaccttggccaaca
tcCCCAAAACCACTGAcaatcaccttggccaacatcCCCAAAACCAGCGA
CAATCACCTTGGCCAACCTCCCCAAAACCAGCGACAATCACCTTGGCCAA
CCTCCCCAAAACCAGCGAcaatcaccttggccaacatcCCCAAAACCACC
GACAATCACCTTGGCCATCATCTCCAAAAAACCAGCTACAATCACCCAAG
CCAGATATTAGTTGCAGATTTTGCTATGCACTTGATAAAATCTTAATGGT
TCGtttcataaagtttttcaaagaatcTGGTCTCCTTCCGTTCGTATGCA
ACAAAAATTGTACGCTTCATTTCACAAACTACTTTTGTATCTATGAATGT
CCATCCTCAAAATCTCTTTGCGTTCGGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000093_pilon | genome | sc0000093_pilon:441581..446237 + |
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