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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000093_pilon:180137..187477+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12350.2.p1 ID=MSTRG.12350.2.p1|Name=MSTRG.12350.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7341bp|location=Sequence derived from alignment at sc0000093_pilon:180137..187477+ (Clytia hemisphaerica_ch_hm2_pilon) ATCTTCGAACAAAGTGTCTCTACGTAATAAAACCGTGAgtacattttctt
cttcttaccTATACATAATTTGAATGTCTTgatctggcaatgtattgtat
ttattttttttccgatttgGATGAAATGTGTTCAAGAATTCCATTTTCTA
AACAGTTCTATAATTAGCTGGAGGGAAATAATAAAGGGCAGAACCAgagt
tcttttttactttttttgatttCGGCCCGCTTTTTCTGACGATTCTGGAT
CTTGTGGAACTAAACGAAACACTCGGGAGCTGCTCGGAAACTACTAAGAT
ACTTTAACTTACTTGCTTGTCGACTTTTCTTCTAATAGCAATAAATTTCT
CTTAATTCTTAGGAGAACTCAAGGAGACTCAACGAACTTGGCCATAAAGT
GCAGTAAGCATCTAAACTTATTTTGAGACCTCTTTACTTAATTTTGTGGG
ACTGGTTCTAGCCCATAATTATTATTCTTTTATGTGCTGTATTTAAAGCA
GCGGAGTGTATGTAATGTAAAAGGAACCAGACTTTCATagccattttttg
aaattgaaacaaaatgatGGCCATGAAAATGCTCtaatagtgaggtctgt
tagcacaaaaatacttcagatggtgataaaagcatgaaatttggcacaga
tgatccttagagggtccaaaacttaatttcaaacagtagcaccaaatttt
gccacctgaccacctgccagatgacgtcatcaggtggctgggcaaaaaat
tatttttttgaaaatattcaaaatctgatggttccaaCGGAAAGatcatg
aaatgctgatgaaaattgaggtataaagcatgccttgaaaatcttccaac
CAAAAGTTATcgaggttgaaagttttgtgatgacgtcatcataagccttt
ccaggcaaaacctaaaaatcccgcaataacggaactagttgaccaaattt
ggtgTCTTGAATGAATCCATGTCTgtccctctaaggatcatctgtgccaa
atttcatgcctTTAGCTACCAGACCTCACTATAAAAAATAAAGACTTGAA
CTGGCATTTGATACGAATATGCGCTGTTATAGGGTTAAGTCGGACGACAT
TCCGTCTGACACTGATTGCGCCCTTTCTCAAGATACCAGAGTTGACACTC
TTCAAGGAAAATAATTTGCACCTATTTGTTACGGCCGAACCTGTTTGATA
GCTCGTTGGAGATGTCACTTTTGATTAATTAAATTTCTTGGCTTTTTAGG
GCTCATAAAGAACGACGAGACAAAGCTGAACGCAGTAAACGGCGATACAG
TCAAGATCTTCATGAAATGATCGGTGTCATGTCTTCACAGGCTAGAGAAg
gtagaaaaatatttcattcagCGTGATGGCAATACTGAAGCAAATTGACG
AAATCTAGTGTTTTTGCTTACCCTTTTTAAATAACAAATCGtaaaaaatt
ttgcggggacGCGAGCGTGAAATTACTTAGATAATTTTTCCACCATTCAG
AATTTGAAACTGCTTTTGGTAGAGAAAGGAAATGGGCGCCGAAATTAATG
ATGGTTTTAAAGTGTATTTTGAGGTTTTAAAGTGTATTTTGAGGCCCCTA
GAGCCAAGGTCTTCGAGTTACaaactttagattttttttgaatcttCCGA
AGCTAAGACacttgaaagttttctttttccgtaaatcaaaaaattaattt
aaatggTGGAAAAAATGGCCGAAATTTGTTAACAGTTCACGATTCTctca
ccttggtagtaactgttttcagaaaatatttccaggtaccacccctgttt
ttgagtgatatcatcaaaaacatgctcgaaatcaCCCTAatttgcgatta
tttttcaacctaaagccatttttgtgctagattttcttttaatttacttg
gttaacagctgttgagaacattttaatgataattagggaaagcataattt
caaagttgggtctgagaaaattttcgtccatttataacaaaaatattttt
tgtaacaaaaaaaattcattttttgtgaaaaattttgaaagttctttata
aaagaattaaaatataagcacttactacaccaaaagtgctagttttagtg
tttggcaccacccccaaacagcagttactacactgtgtagtaactgtttt
cataatttctgaatacagtaccaccacggtagtaagtgtcatactgtctt
gtagtaactgcgtgccccccctgaCCTAACCCTTATTGATATCagattat
aattattttattccAAAGCTCTGATTAAAGTGAAGTGAACTCGGGTTAAG
TCGAACttataatattaaaaatatttctaaacttCTAACTAAATTTTTAA
GTCCCCTTCAAGGAGAGATCTTCGTAAAGtgctttttttaaattcgaATA
TCTCCgtaatttgaacaatttttttacaattttctatTCAAGTTCAAATG
TCAGAGAGCCAGCTGTATGGAGATTTGATTTAATTCTAGATGGACGACGT
TTGAAAGATATCAAAGTGAAGATTGAAAAGAATACAAACGACATGCGACA
ATCACAAATCAAACATGATTTATTGCAAATGGAAAGGCTTGGAAAACAAT
CTAATGAAAAAGTCCTAGTAATGCTTTCTCTTTCTTCATGAACTCTTTTA
GTGCAATATATGAACGAAAtttttttATCGGATATCAGTCTTTATTTACA
CTTTTACAAAAAGACCTGAATGAGAGGATTGAagtgaaattttattcatc
cCTATACATATTTTACCTGTCTGGAAAGGATTGGAGGTCACAAATTTTTC
TTACTGAGTTGATAcatgttatttaaaaaaatcaaaatagttATACTAGT
ATGCGTTCATCTATCAAAGCCATGGACAAATTTTAAACACAAACACGTAA
TAAATACATTCAacattttcttaacattttctttttaatcaaCTTTCTTT
ATGTCGAACAGGCTGTAAACGCCCGTCGTAAAGAGATCCAAGATATTTTA
TCGCAACAACGAAAACAAAGGAACGACCAAACTACGGACGAGTTCCGGAT
GCGTAATTTAATGGTCAACCACGAAATCAAGAAGCAAAATTTAGACGACA
GTATTCAACATTTATCGGtatatattttgagatttttggacaaatttatC
ATCATCATTTAGTAAACAGTCAAAGCTGGTCACATGAAAgatttgtatat
gtaatcacatgataacgagtgcaattcgaatataattgcacgagtgattt
ttttgttattgattttccgagtccgaaaggacgaggaaaattcgaaacaa
aaaaatcacgagtgcaattttcgaattgtacgagttattatgtgattacg
agctaatcgcacaatggctttcactactttttcccagctaggaaagtaaa
ttacactgagagttttatatttttcttctctctttttgtctttcttttcg
tctttcttttattgttgtttattgattttctttctcacaaaataaatttc
gaatgcaattaaaacgttcgatgaaaaaaaaatataagaaaaaacattaa
aattcaattttgtaaacattagGGGTGTGATAAACGATTAATTgatctct
acaggatgcaattaacgaataattgctctctttgagggcgtgccaagtaa
gaaaaaataacccatcgtgcgattacgTTCTGTTATCTTGTGTTATCGTA
TTTGAATTCTTGAATTAAATTAGATTAAAAGTAAAACAGTCCACCAGatc
ttagttgtttttggaagataaaaacagtatgaagcaatgtttttatttga
gaataaggggtTGCAAAtatgttattgatgtttgtttctcattttttatt
atatctttcaacgccaagcagttttttagttatttggattttaaacattc
tttttttaaatggcaacctcgtcaaatgctcctagtctacttcactgaac
tcagcgtcatcagaaatcatcaaaaagcaaagttcagccagaagtagact
ctagtctacttaTCTATAGGTTAATTCTGACCTACTCATGTCAAAAATGA
GCTATTGCGCGTACGCTATTATAATAAGTCTCATGATAAATCATCAATCA
GAGTAAGAATCTTAAAAAGATGTAAAGAACTTATTCATGACGGGTGGTTa
aacagggccggcgaaaccggggggggggctaggggggctatagccccccc
cccccccccccccacttttttgcaaaaaaaaaaaagagagagaaagagag
ggtaagagaaaaaaagaaaaaaagaaatagaagaaacGTGGTGACGTTTC
TCAAAAACAACAATCTTtctttgctccacatccataaAAATCTAACGGAT
AAACTTGATGAAGTTGGTAGAGAGTTTGTGTCGACTCGAGTGAATCGCTT
TAATTACTTTGGACAATTTTAATCTTTGATTACTGTATGCTTACTGCCTG
TTAAAAGCATACTTTAAATCTAATTTTACTGACGAATTTTGAACATGTAA
AAGTCCcgctttatttatttataggtttcattttgttattataTAGTAGT
ATATTCTTTAGCAGTATAAAAAGACACTtaacttctttgattttttcatt
ccaataacttcataaaaattaaatttaggcCGATTCTAAGCTAATGTAGA
gtaccataatttcaaaaattttccggcccgtcggccccaaccatggtggg
gcctccttagtcactatatcatttagccccctcactttcaaaaccgattc
gccggccctgttaAATAGAATTTTAGTAAGAAATTCTATGCTTGCCTTAT
CATTTTTCTGAATTAGTTCTATCTGTAAACAAATCATGTTATTCGTTGTA
GCGAGTTGTGGACCGGCATGAAGATACGGAACACACATTATACGGGCAAG
TCCGCCAACTGGAATCTGATCGACGGAAACAAGAGCAGAATGTCCACTCG
TTGAAACAACAGTTATTagaaactcaaaaacaaaacaaattattgTTAAA
TGTAAGaggttttatttaaaattttaatgatgctttttggactttttgat
ttttcaattgcAAAGATTACAAAGGGACTTAAGCTTAAGTAGGGAAGGGA
GGAGGCCCGAAGGTCCCTCTCTTCATAGCTATCTACACGAAAGTAGGGAA
GGGATCCACTCTTTCTAGAACTGGATTGCTCCTTGATCCGTCTCCTTAAT
TGCCGAGCATTAAAATCAGAAAGGCATAAAttaccattttagaatctttg
gtatgaccttCGGACTTTGCCCACCATCGCAAAGCTGAGTGTTCTACTTT
TACACCGCGGATCGCTTGAAGGCTGCTGGAGTTGGATGACGCCAATGTTA
TTTTTAGGGAAATaaccaaaaagttaaaattagaCGGTTCATAAGGAAAA
GGTCTGATACTTTCTGATAAAGTTTTCTCTATACATTTTCATAGCAAACT
GCATTCCGCTGTAAACAGCAAGAGATCGAATTGGAACAAAGGCTATTACG
CGAAGAGGCTGATCTCCGAAAGGTAAAATAATTTATTCtggaaaaacgtt
tttttggcaagtgactaaattttcctgtcattttgaaattttggtcatga
aaaaatattcctACTTCCTGTGTTGCGTTATAAGTGATAGTTagttttcc
aaagaaattttaGCTACAATAAATCCTCGCTTTTAAAAATATACCAACCA
TACAGAGAGTTAATTGTATTGTGGAAATTCTGTTTCGTTCTTGGTGTAGG
CATTAACAGAACGAGAAGAGCGCATTCAAACGTTAGCCAAATACCGAGGA
TTTTCTAAAGAAGAGAAATATATGCTGGAAGAACAACGAAAGGTAACCTT
CTCTCTTGATATCTAACGGTGTTTGCAAAATCAATTCATTCAgctttgtt
ttatgttttgtgCCAGAAAACGAATCACGGCAAACCCCCTCCCGGTGCTT
TCATTGCCATTATTCCCCAGATATCCTCTTTGTTGTAATCGGTGAGCCTc
cttcgaaacaaaaagataTGTTCCATTATATCTTTTATCTggaattttga
agatttgataTCAGCGCGTGAAAGAGTTTCGGTTCTAACTGATttaattt
tcggaaaatatttACGAAAATTAATTATGAGCTCAATGTTTATAAACCTG
TTATAcatttatctttttcatttttgtttgcaCAGCCCTAGCGCACGTCG
TTTCGTCTAGGGCTAGTCTACTCTTGAGCCTATACTAGAATAGAATTGGT
GGGATTTATTGACAACGATTGAACAGAATTGGTTCTGTATCAATTCGCCT
TACACAATAAACCTTACACATTTAGTAGGACTAGCAGCGTGCATATTGTT
TTTTGCAtgtattttataagaaaatagaCAGAAAATAGTTGCACGTATCA
CAGCTTGCTGCATGCACCAAAAGTAATTAGtgaagattgaagtgaagaga
agagagaaaaagagattgaagaataaagttgtttcaagagaattttttgc
acgaaagctCAAGAAGGTATTTTATATTTAGAATATATAATATGACAAAA
TTCCTTTTCTTATTGTTACGGAAGGGCCTTTCGAAATAACCATTAGAGAA
AAGTTTTCACAATACAGTAAAAGTTCTTAGACGGTATCGGCGTTCCACTT
GGCCCCTTTGAGTCTTAGGAAGTATATCTGAACCAACCATTTAGTatctc
ttttcctttttttcagaaCCAGGATCGACTTCATCGAATCGAACGCAAAA
CGAATATGATCCTTGAAACGCAACCCATGGGCAAACAATACGAAACTGTC
TATTGAGATGGTGATTGTTGTGAACTTGGTTGTTATGGTGATATGTTGAT
TTTGTTTGGACAAAGTGTAGTGGctggaatacaccttttcgaccgtagcc
atcaattgccgcgcgggcatttttttgtccgccttatcccactaaaaccg
ccccagtccttttttcgcaccaataaacaatagaaaaatgcgtcaaaaaa
ggattgggagggttttagtgggataaagtggacaaaaaaatgcccgcgtc
actacggtcgaaaaggtgtattccgAAATTGAAGATGGATtggaaattat
tattattatattcagtttttttACATGAAATTGCTCACTCGATTTTCAGC
TATTAGAATAAACCTAAGTAATAGATGTATGGACGGTTTTTGcgctaaaa
agatttttttttcaaattgagtgAAATAAAACCTAgtcctttttaaaaat
cttaactTTGGCAGAGGTTTCAGCTGAATTAAGAAGTAACACGTAATGTC
CCTAGAGTACGtattataccttaagggaacttattttgacg Coding sequence (CDS) from alignment at sc0000093_pilon:180137..187477+ >MSTRG.12350.2.p1 ID=MSTRG.12350.2.p1|Name=MSTRG.12350.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3852bp|location=Sequence derived from alignment at sc0000093_pilon:180137..187477+ (Clytia hemisphaerica_ch_hm2_pilon) ATGCGACAATCACAAATCAAACATGATTTATTGCAAATGGAAAGGCTTGG AAAACAATCTAATGAAAAAGTCCTAGCTGTAAACGCCCGTCGTAAAGAGA TCCAAGATATTTTATCGCAACAACGAAAACAAAGGAACGACCAAACTACG GACGAGTTCCGGATGCGTAATTTAATGGTCAACCACGAAATCAAGAAGCA AAATTTAGACGACAGTATTCAACATTTATCGCGAGTTGTGGACCGGCATG AAGATACGGAACACACATTATACGGGCAAGTCCGCCAACTGGAATCTGAT CGACGGAAACAAGAGCAGAATGTCCACTCGTTGAAACAACAGTTATTaga aactcaaaaacaaaacaaattattgTTAAATCAAACTGCATTCCGCTGTA AACAGCAAGAGATCGAATTGGAACAAAGGCTATTACGCGAAGAGGCTGAT CTCCGAAAGGCATTAACAGAACGAGAAGAGCGCATTCAAACGTTAGCCAA ATACCGAGGATTTTCTAAAGAAGAGAAATATATGCTGGAAGAACAACGAA AGaaCCAGGATCGACTTCATCGAATCGAACGCAAAACGAATATGATCCTT GAAACGCAACCCATGGGCAAACAATACGAAACTGTCTATTGAATGCGACA ATCACAAATCAAACATGATTTATTGCAAATGGAAAGGCTTGGAAAACAAT CTAATGAAAAAGTCCTAGCTGTAAACGCCCGTCGTAAAGAGATCCAAGAT ATTTTATCGCAACAACGAAAACAAAGGAACGACCAAACTACGGACGAGTT CCGGATGCGTAATTTAATGGTCAACCACGAAATCAAGAAGCAAAATTTAG ACGACAGTATTCAACATTTATCGCGAGTTGTGGACCGGCATGAAGATACG GAACACACATTATACGGGCAAGTCCGCCAACTGGAATCTGATCGACGGAA ACAAGAGCAGAATGTCCACTCGTTGAAACAACAGTTATTagaaactcaaa aacaaaacaaattattgTTAAATCAAACTGCATTCCGCTGTAAACAGCAA GAGATCGAATTGGAACAAAGGCTATTACGCGAAGAGGCTGATCTCCGAAA GGCATTAACAGAACGAGAAGAGCGCATTCAAACGTTAGCCAAATACCGAG GATTTTCTAAAGAAGAGAAATATATGCTGGAAGAACAACGAAAGaaCCAG GATCGACTTCATCGAATCGAACGCAAAACGAATATGATCCTTGAAACGCA ACCCATGGGCAAACAATACGAAACTGTCTATTGAATGCGACAATCACAAA TCAAACATGATTTATTGCAAATGGAAAGGCTTGGAAAACAATCTAATGAA AAAGTCCTAGCTGTAAACGCCCGTCGTAAAGAGATCCAAGATATTTTATC GCAACAACGAAAACAAAGGAACGACCAAACTACGGACGAGTTCCGGATGC GTAATTTAATGGTCAACCACGAAATCAAGAAGCAAAATTTAGACGACAGT ATTCAACATTTATCGCGAGTTGTGGACCGGCATGAAGATACGGAACACAC ATTATACGGGCAAGTCCGCCAACTGGAATCTGATCGACGGAAACAAGAGC AGAATGTCCACTCGTTGAAACAACAGTTATTagaaactcaaaaacaaaac aaattattgTTAAATCAAACTGCATTCCGCTGTAAACAGCAAGAGATCGA ATTGGAACAAAGGCTATTACGCGAAGAGGCTGATCTCCGAAAGGCATTAA CAGAACGAGAAGAGCGCATTCAAACGTTAGCCAAATACCGAGGATTTTCT AAAGAAGAGAAATATATGCTGGAAGAACAACGAAAGaaCCAGGATCGACT TCATCGAATCGAACGCAAAACGAATATGATCCTTGAAACGCAACCCATGG GCAAACAATACGAAACTGTCTATTGAATGCGACAATCACAAATCAAACAT GATTTATTGCAAATGGAAAGGCTTGGAAAACAATCTAATGAAAAAGTCCT AGCTGTAAACGCCCGTCGTAAAGAGATCCAAGATATTTTATCGCAACAAC GAAAACAAAGGAACGACCAAACTACGGACGAGTTCCGGATGCGTAATTTA ATGGTCAACCACGAAATCAAGAAGCAAAATTTAGACGACAGTATTCAACA TTTATCGCGAGTTGTGGACCGGCATGAAGATACGGAACACACATTATACG GGCAAGTCCGCCAACTGGAATCTGATCGACGGAAACAAGAGCAGAATGTC CACTCGTTGAAACAACAGTTATTagaaactcaaaaacaaaacaaattatt gTTAAATCAAACTGCATTCCGCTGTAAACAGCAAGAGATCGAATTGGAAC AAAGGCTATTACGCGAAGAGGCTGATCTCCGAAAGGCATTAACAGAACGA GAAGAGCGCATTCAAACGTTAGCCAAATACCGAGGATTTTCTAAAGAAGA GAAATATATGCTGGAAGAACAACGAAAGaaCCAGGATCGACTTCATCGAA TCGAACGCAAAACGAATATGATCCTTGAAACGCAACCCATGGGCAAACAA TACGAAACTGTCTATTGAATGCGACAATCACAAATCAAACATGATTTATT GCAAATGGAAAGGCTTGGAAAACAATCTAATGAAAAAGTCCTAGCTGTAA ACGCCCGTCGTAAAGAGATCCAAGATATTTTATCGCAACAACGAAAACAA AGGAACGACCAAACTACGGACGAGTTCCGGATGCGTAATTTAATGGTCAA CCACGAAATCAAGAAGCAAAATTTAGACGACAGTATTCAACATTTATCGC GAGTTGTGGACCGGCATGAAGATACGGAACACACATTATACGGGCAAGTC CGCCAACTGGAATCTGATCGACGGAAACAAGAGCAGAATGTCCACTCGTT GAAACAACAGTTATTagaaactcaaaaacaaaacaaattattgTTAAATC AAACTGCATTCCGCTGTAAACAGCAAGAGATCGAATTGGAACAAAGGCTA TTACGCGAAGAGGCTGATCTCCGAAAGGCATTAACAGAACGAGAAGAGCG CATTCAAACGTTAGCCAAATACCGAGGATTTTCTAAAGAAGAGAAATATA TGCTGGAAGAACAACGAAAGaaCCAGGATCGACTTCATCGAATCGAACGC AAAACGAATATGATCCTTGAAACGCAACCCATGGGCAAACAATACGAAAC TGTCTATTGAATGCGACAATCACAAATCAAACATGATTTATTGCAAATGG AAAGGCTTGGAAAACAATCTAATGAAAAAGTCCTAGCTGTAAACGCCCGT CGTAAAGAGATCCAAGATATTTTATCGCAACAACGAAAACAAAGGAACGA CCAAACTACGGACGAGTTCCGGATGCGTAATTTAATGGTCAACCACGAAA TCAAGAAGCAAAATTTAGACGACAGTATTCAACATTTATCGCGAGTTGTG GACCGGCATGAAGATACGGAACACACATTATACGGGCAAGTCCGCCAACT GGAATCTGATCGACGGAAACAAGAGCAGAATGTCCACTCGTTGAAACAAC AGTTATTagaaactcaaaaacaaaacaaattattgTTAAATCAAACTGCA TTCCGCTGTAAACAGCAAGAGATCGAATTGGAACAAAGGCTATTACGCGA AGAGGCTGATCTCCGAAAGGCATTAACAGAACGAGAAGAGCGCATTCAAA CGTTAGCCAAATACCGAGGATTTTCTAAAGAAGAGAAATATATGCTGGAA GAACAACGAAAGaaCCAGGATCGACTTCATCGAATCGAACGCAAAACGAA TATGATCCTTGAAACGCAACCCATGGGCAAACAATACGAAACTGTCTATT GA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000093_pilon | genome | sc0000093_pilon:180137..187477 + |
|