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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000092_pilon:1158007..1161796+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12335.1.p1 ID=MSTRG.12335.1.p1|Name=MSTRG.12335.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3790bp|location=Sequence derived from alignment at sc0000092_pilon:1158007..1161796+ (Clytia hemisphaerica_ch_hm2_pilon)
TCTTTAGCAACCACTTTTGTTTACGACATGAAGACAGACAGACAGGTCAA
AGACAAAGAACAGGACGAGTAATCTCAGCACTGGAATTGTCACTTGCAAG
GTCATTCAATCCATCAACACCTTATTTcatactttactttttttataatg
aagaCCCCATACAATATTGTGGCAAATGATCTGATTTGGtgagtattttt
ttaaacaggTTTATAGCCACCACAAATAACagtctaaaattaaaaattgt
gtAAACAACTTTTTGCACAATGAatagtttaggggtcaaaaatggattta
aatctcagaccctagaaattggcacctgtttgttgtttgtgtattttaca
taccgtcaactgctctaacttgggacaattggtcgaaacatgggatgGGA
ACTGTTGacatctggcctgtattttcacttactgtttaaatctctgtgac
aaaaaatttgttttgataactccaccaaacttatcaatcatacttatcat
tctgtcataacatgaaatgtgtatcaaagattaatgctgtgaAAGCGCTA
TATTGTTTGCCTgatgactctcaagcaaaaaaatgcgccgcaaaactttt
ctaaagaaattcatgaaaaaataacccggcgctttttaattattattatt
attaaaatgaaTATTACAGGTTGTAGGCACTCAGTGGGCCTCTAAACTGa
tctcaatttacaaattttgtgtaTCGAATTTCTTTGGATGGCTTTTCCAt
gcttctttcaacttttctttgaagCCTTTTATGGAAACAGCAGCTACCAC
CTCAGACGGCAATTTATTCCACGTAGGGATGGTTCTGTAGTAGAACGACT
TTGTTTGCAGGCCGCGGAATCCATCACTTGCAAAGTTTGGCTGCAGTTCA
ACTTTGTGTTGTCGTGTGTTGTCGATTCGGACGTTAATGAAATTAACTTT
CTCAAagctatgagaaattgcctaaaatttgagccatagatgaaaaagtt
tgagccaagccaaccttgagaactaatttgatgatcaacttcccaagaaa
aagatctacaggggagacgggacccacctagatccgcacaCTGCCgaata
ggctatttcccggaattttgccggacctcaaacactgacccatttacatg
tgcggaattgtttttaccttagcgtataaacaaggccttaaaaatcaaag
cgcttTCTCAGGAATTAAATGACAaactttggttggttgattttggctgc
tgcacgttttatattgtttcaaactttcaagttttaattaattgtcttgc
gaacttgattcaggtaactttcatccttgttgttgcaaatacatcctgta
gatgactgatgttgttttttctgaaagcttgatttcctagtgtgactaac
tgttagagcagttgacggtaccagAACAggcttaaaaatgaatttttttt
ctccaaagttATGTCATgttggaaagcatttttcatgctcgtgtagaaaa
acattacaacgcatatctgaaaatgaagccaaaaaaagttattgcgGAAC
GATGCTTGCAATCTTAAATCTGCTTTTTGTGTAAATGATCATGAATCAAA
TGTTTTATCCATCCATCTAAATTATTTTTGGCTGTGTGCATTGTTTTTGT
AAGTATCCCCCttattaaaaatcaattaattcataaatttttatttcact
ttagGAAAGATCACATTCAGAAAGAATACACAGCTGCAAACCAATGGGAT
GATAAATGGGGCTTCCTTTCATCGtttatttcaaaagaagttTACAATGA
ggtatatacacgtttttttaaagaaccttaacttggctccgagcctggaa
ttccttatttttccagagaGTTTCAGCCTCAAAGCTCCCCATCAAGTTCT
TTTTTACTTAGCTGCATTCAGAATGTGGATAAGCattgaccattttcagc
cttaagTTCCTTATAATcgtgttctttataaaaaaactgtgtCATCTTga
tcattgaattttttttattaactaGTTGAGAATCTCCACATTTGTTTGGA
AAAGAAATTGTGAATGTCCTGCCATGGAATAAGCCATAATACAGTAGCAG
ATTAGTCAAAAATTAgcaatagactttttttttgttttgtttaagtTTCT
TAACTCTTGCAATTATgtaagcaaacgttcgatttgaaGATCATCTCTAC
AGGTTCAAAGGTTTGTTTCCATAATGGGGggaattacgtaacttaacaaa
acacaaaaaaagctCCATACTTCAAACGCATCACTTCAATATTTGTTTTT
TCTATTAGAAATCTGATGATACTGATACCAAGCCatccaaaagtaaaaaa
aaatcttcagaaggATTGAAGCTTCCACCGATCCACAGTAGAAGTGTTCC
TGATAAATCATCTAAACCATTTCCACGAACATCCACACAATTTATCGGCT
GGAAATCACAAGATGCTGAAAATAATTTGGAAAAATATGGGCGGTATACA
AAACCTACTAAAACTTTCTTGTCAGAAATGCAATGGCCTCATGAAGCAAT
CGTATGAATATTGGGCTTGATTTTTAATCAAttgttttcattgatttttg
caGTTCTCTATCAACCCTCTCCGGTGCAGGACAACTTCAACGAAACTTTT
GTAGGCCGTAAAAACCTTACAAGGTTGGATTGTAACACGTCGCCATGGTT
AAAGCTAATTCATCAAAGTTTCTAATTGTTAACCAAAATTAATACCAAAT
GAGAAAGGCAACTCTCTCTCTAAGACAGtcaattctctctaattcgaacc
tctattattcgaatctttctgtaattcgaactaaaatattagcCCCTTCA
ACTgaaaaagtggtttaaattttttctctgcaATTCGAATCGTTCTCTAA
TTCAAAGAAagttttggtcccttgaagatcgaattagagagagtgactGT
ATGAAGTATGATTTTGACATCAACTGATTTTTCTACCTTAAAATTTATCG
ACTCTTCTTTTTATTGTACTGACAcgacaaaaataatattttggttGCAA
GCAAATAAGCACTACAAAATTGAACAATATTTTTGTTCTTAGAACAGATT
TTTCGACTACACGCTTTTAAGAATAGTGTTCAAGTTTTCTTAGAAAtttt
ccgaatctgaaggtTAGATATTCATTCtaaacatattcttatttttcata
aaaatttttcttttaataatatCTAAGATATCAAGAGCTTTTTTGGATGC
TTCAAccctttggtaggatttgtctGTGCATCAAGAGCCATTGAACTAGC
AAAATATATCTATAACAGGCGGTTCTATTCTTAGACTTTTTTGTGCGAAT
TATGACTgtcttttgatttttcccaccctatATTCTTACTGATTCGAAAA
ATCTCACCCTCAAGGTGttcttaagatattcttatcATCTAGTCGATTTT
CACCCAGATATTCTTATAGGAACTATTCtcattaaaaaacgtgtatatat
cCTTTAAACCCAATCATTTTAAGGTATCAATATTCTTTAGGGTTGATTTT
TATATGACAGTAAtttttttGAGACgtaatttagattttattttcatact
taATTATGGTAATCAAGGGAGAAaggtaattttgattttcttgaattttt
ttgtattttaataaaataatttttaaaagaaactgattttgttttattta
atttaatatttaaattactgatttttttaCAATGAACACCActattcatt
tttataatttcaaagatcattatatttttttgtcaaaaaa Coding sequence (CDS) from alignment at sc0000092_pilon:1158007..1161796+ >MSTRG.12335.1.p1 ID=MSTRG.12335.1.p1|Name=MSTRG.12335.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1161bp|location=Sequence derived from alignment at sc0000092_pilon:1158007..1161796+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaagaCCCCATACAATATTGTGGCAAATGATCTGATTTGGAAAGATCA
CATTCAGAAAGAATACACAGCTGCAAACCAATGGGATGATAAATGGGGCT
TCCTTTCATCGtttatttcaaaagaagttTACAATGAgAAATCTGATGAT
ACTGATACCAAGCCatccaaaagtaaaaaaaaatcttcagaaggATTGAA
GCTTCCACCGATCCACAGTAGAAGTGTTCCTGATAAATCATCTAAACCAT
TTCCACGAACATCCACACAATTTATCGGCTGGAAATCACAAGATGCTGAA
AATAATTTGGAAAAATATGGGCGGTATACAAAACCTACTAAAACTTTCTT
GTCAGAAATGCAATGGCCTCATGAAGCAATCGTATGAatgaagaCCCCAT
ACAATATTGTGGCAAATGATCTGATTTGGAAAGATCACATTCAGAAAGAA
TACACAGCTGCAAACCAATGGGATGATAAATGGGGCTTCCTTTCATCGtt
tatttcaaaagaagttTACAATGAgAAATCTGATGATACTGATACCAAGC
CatccaaaagtaaaaaaaaatcttcagaaggATTGAAGCTTCCACCGATC
CACAGTAGAAGTGTTCCTGATAAATCATCTAAACCATTTCCACGAACATC
CACACAATTTATCGGCTGGAAATCACAAGATGCTGAAAATAATTTGGAAA
AATATGGGCGGTATACAAAACCTACTAAAACTTTCTTGTCAGAAATGCAA
TGGCCTCATGAAGCAATCGTATGAatgaagaCCCCATACAATATTGTGGC
AAATGATCTGATTTGGAAAGATCACATTCAGAAAGAATACACAGCTGCAA
ACCAATGGGATGATAAATGGGGCTTCCTTTCATCGtttatttcaaaagaa
gttTACAATGAgAAATCTGATGATACTGATACCAAGCCatccaaaagtaa
aaaaaaatcttcagaaggATTGAAGCTTCCACCGATCCACAGTAGAAGTG
TTCCTGATAAATCATCTAAACCATTTCCACGAACATCCACACAATTTATC
GGCTGGAAATCACAAGATGCTGAAAATAATTTGGAAAAATATGGGCGGTA
TACAAAACCTACTAAAACTTTCTTGTCAGAAATGCAATGGCCTCATGAAG
CAATCGTATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000092_pilon | genome | sc0000092_pilon:1158007..1161796 + |
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