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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000092_pilon:978533..981253+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12320.1.p1 ID=MSTRG.12320.1.p1|Name=MSTRG.12320.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2721bp|location=Sequence derived from alignment at sc0000092_pilon:978533..981253+ (Clytia hemisphaerica_ch_hm2_pilon)
TGATAAGATTAGAGAAAGTAGGAAATATAACACTCCATATTACTGCTact
gttttttaataaaacaggCATGCAAAAGGGACAATAAAAAATGTGCtact
ttttatttatatattatgGTGTTgctttttgtgttttggttggCGGTATT
GTTTGTGGCGGATGGTTTGGATATGAGCAACACCCCGGTGAAGCAGTTTT
TGCCACTGGAGTCTATATTATCTTTCATTTGTATGATGGAGTTTTCGCAT
CTTTTTGTCGCCACGAAACTGATTTAAAATGCAAACGATTGAAGGTCCTG
CAATGGCGTAAGTCTACATAAAATTTCCTGGTTAATCATTTTATTATTAT
AACGCTACTAAGAGTAAAGGTACCAGATGCAGCTTTAGATTCACTGCATT
GTTtgggcccgggggggggcactcgatctgaaaacgaccatacgttcggc
ccaaaatttggcttctaaaatcggacccttacagggggggtttcatggtt
ggcggaggagcggaatcggcccttttttcggacggagtggcggaatttgg
cgaaaatttagacggaattacggaaattgggttctctgacggagacggaa
aattagacaattttagtgcggaataacggaatttagcaaaaaaattggcg
gaatttcggaattggtaaaagattttcaaaatttgcggaattttcgacaa
aaatattgaatttcaaaggaattttcggtgacggaattttggttcaattt
aagacggtgtgacgaaaattggagaaaaaattggcggaattacggaatcg
ggtaccccctgaaacccccccccccttacagtgcagtgaatttccatgaa
aaatcatacccttacagtgcatttttcaaaatttctctgccgtaagggcg
aaaatttttgcaattttccaagaaaatgtggaatttttcctccaaaattg
accaattttgtgccaattttaccaaaaaaattggccttttatcacaattt
cttacccttacagtgcagttcagtgcatttttgtaatttcctacccttac
agtcactagctgaactatgaaaaacctacccttaagggccgaacgtctgg
taggtcatttaccttgagtgcccccccccccccccgggtgtccAAGGACC
TTTAGTTCATTTTACACTTTTGAATTGATCATTCAGCAACATTATATCGA
AACGGCTAGAGCTACCATAGTGAAATGAATTCCTGTTTTAAACACAATTT
ATTGCTGCCATTTTGGATGGATGAGACTACCCTCCTTATTTATATATTTA
ACAAAGGCGATCAGTTATTTGCCTTTTTGTGTCCTGGACCATTTCCGGAG
TGTTTAAAGCCAATTTTCTCAAACAGGAAACTTGCTTCTTATCCAATTTG
GAAACGAAAGATGTTTCGGGAACTTTCCCACCTTCCTGTTTGGGAAGTAT
TTCCCGTTAAACTAATACTCACCATTTCCGTATAATATTGCTGACTGGTT
GTGGATATAGGGTAGATTCATATAGGTAAATAAACTTCTTTTTCTCGGTT
TTAGAgttttgttttgctttgctTGGAACCCTTTGTATTGAGTCGTCGAT
TATGAAATCTATTTTCGGAACATGGGCTGTGTTGTCATTCGGTCACACAG
TTATTACAGCCATTATGCTATGTTGCAATGACGGTTTAAGATTAACTTTT
GGAGAAAGCTATGAAAGAAGGATTGCTTgggaaaacaaaattaaacaaaa
catACGAACAGCGCCTGAAGTTGTAACATATTGTGAAGTGACAGAACCAA
AACCGctctggaaattttggaaaacaaGAGAAGTCATTTGGAGAGAAAAT
GAGACTTTCAAATATAAACATTGGATTGATTTGAGCCATATTGATAAAGT
TTTGTTTAAGAATATTGGAAAGGAGCAGAATTTTCAGAAGATTGAATTCG
ATATTCAATTTGATGATGAGGAAACAGAAAAATCATATCAACGACATGTT
CAAAATCTTTTGGACGAGTTACCTGAAATGTGTCGGAATGGTGTGATCGA
AACAAAACGCATAATCAAAGTGGATGGAATCAACATTGACAGAGAGATTG
TTATGAATCTAAGTTCCATTGGTTTTCTAGAAAAACAACCTTGGCTATTG
TTTTTGTCTTTACCTGTCAGCATCCTAAGTATCTGTCGGAAGATCATCGA
TTGGTTAATCATTAGAATGAATATTGAACCCTTTTTAAAGAAAGTGACCA
TCAGAAAAGTCGTTTCAAACAAAGATATCGAGGCCATATAAACCTCACTT
GAACTTAACGTCAAGTATTTAGCTTCAGtaaatgacaaaaatatcgACTA
ACAAATTTGATGTAATTGTTCTCTTCTTTATTACCTGAATATTTTATCAC
TCCcttacttaaaggttttatttttacataagtgctcctgtttcatatca
gacacatattcaATATCAGGActgtgtctccctattgttatatcatgcta
ataaaagcaaaaaattgtttttcttttcctcattctaaccaatcttgctc
cacatccatgtcaatccaGTGTTAAAAAGCTtgcgaattaaaattgatga
gtaagcaaacgatatcactcttacttAGAAACACAACCtttaagttaaga
aaatgtGGTTTACGTGATGAGGATTAGCTTTGTGGTCATTAAGTTCATGA
ATTATTAACGCATCTTTTACA Coding sequence (CDS) from alignment at sc0000092_pilon:978533..981253+ >MSTRG.12320.1.p1 ID=MSTRG.12320.1.p1|Name=MSTRG.12320.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1908bp|location=Sequence derived from alignment at sc0000092_pilon:978533..981253+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGCtactttttatttatatattatgGTGTTgctttttgtgttttggt
tggCGGTATTGTTTGTGGCGGATGGTTTGGATATGAGCAACACCCCGGTG
AAGCAGTTTTTGCCACTGGAGTCTATATTATCTTTCATTTGTATGATGGA
GTTTTCGCATCTTTTTGTCGCCACGAAACTGATTTAAAATGCAAACGATT
GAAGGTCCTGCAATGGCAgttttgttttgctttgctTGGAACCCTTTGTA
TTGAGTCGTCGATTATGAAATCTATTTTCGGAACATGGGCTGTGTTGTCA
TTCGGTCACACAGTTATTACAGCCATTATGCTATGTTGCAATGACGGTTT
AAGATTAACTTTTGGAGAAAGCTATGAAAGAAGGATTGCTTgggaaaaca
aaattaaacaaaacatACGAACAGCGCCTGAAGTTGTAACATATTGTGAA
GTGACAGAACCAAAACCGctctggaaattttggaaaacaaGAGAAGTCAT
TTGGAGAGAAAATGAGACTTTCAAATATAAACATTGGATTGATTTGAGCC
ATATTGATAAAGTTTTGTTTAAGAATATTGGAAAGGAGCAGAATTTTCAG
AAGATTGAATTCGATATTCAATTTGATGATGAGGAAACAGAAAAATCATA
TCAACGACATGTTCAAAATCTTTTGGACGAGTTACCTGAAATGTGTCGGA
ATGGTGTGATCGAAACAAAACGCATAATCAAAGTGGATGGAATCAACATT
GACAGAGAGATTGTTATGAATCTAAGTTCCATTGGTTTTCTAGAAAAACA
ACCTTGGCTATTGTTTTTGTCTTTACCTGTCAGCATCCTAAGTATCTGTC
GGAAGATCATCGATTGGTTAATCATTAGAATGAATATTGAACCCTTTTTA
AAGAAAGTGACCATCAGAAAAGTCGTTTCAAACAAAGATATCGAGGCCAT
ATAAATGTGCtactttttatttatatattatgGTGTTgctttttgtgttt
tggttggCGGTATTGTTTGTGGCGGATGGTTTGGATATGAGCAACACCCC
GGTGAAGCAGTTTTTGCCACTGGAGTCTATATTATCTTTCATTTGTATGA
TGGAGTTTTCGCATCTTTTTGTCGCCACGAAACTGATTTAAAATGCAAAC
GATTGAAGGTCCTGCAATGGCAgttttgttttgctttgctTGGAACCCTT
TGTATTGAGTCGTCGATTATGAAATCTATTTTCGGAACATGGGCTGTGTT
GTCATTCGGTCACACAGTTATTACAGCCATTATGCTATGTTGCAATGACG
GTTTAAGATTAACTTTTGGAGAAAGCTATGAAAGAAGGATTGCTTgggaa
aacaaaattaaacaaaacatACGAACAGCGCCTGAAGTTGTAACATATTG
TGAAGTGACAGAACCAAAACCGctctggaaattttggaaaacaaGAGAAG
TCATTTGGAGAGAAAATGAGACTTTCAAATATAAACATTGGATTGATTTG
AGCCATATTGATAAAGTTTTGTTTAAGAATATTGGAAAGGAGCAGAATTT
TCAGAAGATTGAATTCGATATTCAATTTGATGATGAGGAAACAGAAAAAT
CATATCAACGACATGTTCAAAATCTTTTGGACGAGTTACCTGAAATGTGT
CGGAATGGTGTGATCGAAACAAAACGCATAATCAAAGTGGATGGAATCAA
CATTGACAGAGAGATTGTTATGAATCTAAGTTCCATTGGTTTTCTAGAAA
AACAACCTTGGCTATTGTTTTTGTCTTTACCTGTCAGCATCCTAAGTATC
TGTCGGAAGATCATCGATTGGTTAATCATTAGAATGAATATTGAACCCTT
TTTAAAGAAAGTGACCATCAGAAAAGTCGTTTCAAACAAAGATATCGAGG
CCATATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000092_pilon | genome | sc0000092_pilon:978533..981253 + |
|
