MSTRG.1231.10.p1 (mRNA) -

Overview
NameMSTRG.1231.10.p1
Unique NameMSTRG.1231.10.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000006_pilon:525208..526679-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.1231.10.p1 ID=MSTRG.1231.10.p1|Name=MSTRG.1231.10.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1472bp|location=Sequence derived from alignment at sc0000006_pilon:525208..526679- (Clytia hemisphaerica_ch_hm2_pilon)
TTGTTCATTGTCACAGTATAAATAGAAGCGCAAGAATTGAACAGTATTAA GAAGCTCACCATCAGACAGAGAAGATATAAACCACAAGAAGCAGACAACA AAGTTAACTCTTGGTATCATGATGAAAATCGTTTTTCTTTTTCTGGTTTG TTTTGTTCTTCAACAAACAAGTTCAAATGAGTTGAAGGAAGGAGGTAAAT ATGTAACATGTTCGAACCCAGTAACTCTAATGAAACATAAGGTTTCCTGT TTGAAAACTAGATTTTGCCTTTTTAACAACCAGGTTACAAACAACAAATC CATCTTCCCTTGTTCTTATATCATCTCATCCTTTCTATCTATGAGAAGGA ATAGTAAAATTAAAACAGGAAACCTGACATTTAAAGATCCACATTCAAAC ATTCAACAACATGCTCTGTTTCCCTTTCAGAATCTCACAGCCGTGAACGC AGAGCAGTGTGTGGTTATCAAAGATATAACACTCGATTTAGGATGTGCTG CAGTGGCAAATTGGGCCTAAAAGGATCTAACAATGCCTGCTGCGGTCAAA CAGGTTATAACACTCGATTCAGGATGTGCTGCGGTGGCAAATTGGGCCTA AAAGGATCTAGCAATACCTGTTGCGGACAAACAGGTTATAACACTCGATT CAGGATATGCTGCGGTGGTAGATTGGGCTTAAAAGGATCTAACAATGCCT GCTGCGGTCAAACAGGCTATAACACTCGATTCAGGATATGCTGCGGTGGC AAATTGGGCTTAAAAGGATCTAACAATGCCTGCTGCGGTCAAACAGGTTA TAACACTCGATTCAGGATATGCTGCGGTGGCAAATTGGGCTTAAAAGGAT CTAACAATGCCTGTTGCGGTCAAACAGGTTATAACACTCGATTCAGGATA TGCTGCGGTGGTAGATTGGGCTTAAAAGGATCTAACAATGCCTGCTGCGG ACAAACAGGTTATAACACTCGATTTAGGATGTGCTGCAATGGTCGACTAT GTTAAAAGAATATCTGTATAACTACAGCACCGAGTTTTAGTTTAAACATA TGGGGATAGAGAAGGTATCTCCAGCAACCTCAAGCAAGAAAAAGTGCTTC CGGAACGACTGATTTAATTTATCGCTTTCTTTATTTTCACGCGGCATATT TTTCAAAATCTGGCGATTAATTTTACTTTCAATCTGCCGTTTGTGCGAAA ATCACGCTTTAATTCCATCAAAGAGTTTCAATAATAGCCCCTTCAGGACT TTAAACTCAATGGTATTAACTCTTATCAAGGATTTGTAGAAATAAAAGGA GCGAAATGATATTGAAAATGTTATTTCTTACTTTGTATTTCTATAGAGCA ATCTTTTTATGTATTGTTATAGTATTGTATTGTGTATGTATTGTTATATT CATGTAAAAATAAAATTTTCATTCTTGATCCCTTAAAATATGGAATGTTT ATGTTTCACTCTTGATAAGGAA

Coding sequence (CDS) from alignment at sc0000006_pilon:525208..526679-

>MSTRG.1231.10.p1 ID=MSTRG.1231.10.p1|Name=MSTRG.1231.10.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1302bp|location=Sequence derived from alignment at sc0000006_pilon:525208..526679- (Clytia hemisphaerica_ch_hm2_pilon)
AATCTCACAGCCGTGAACGCAGAGCAGTGTGTGGTTATCAAAGATATAAC
ACTCGATTTAGGATGTGCTGCAGTGGCAAATTGGGCCTAAAAGGATCTAA
CAATGCCTGCTGCGGTCAAACAGGTTATAACACTCGATTCAGGATGTGCT
GCGGTGGCAAATTGGGCCTAAAAGGATCTAGCAATACCTGTTGCGGACAA
ACAGGTTATAACACTCGATTCAGGATATGCTGCGGTGGTAGATTGGGCTT
AAAAGGATCTAACAATGCCTGCTGCGGTCAAACAGGCTATAACACTCGAT
TCAGGATATGCTGCGGTGGCAAATTGGGCTTAAAAGGATCTAACAATGCC
TGCTGCGGTCAAACAGGTTATAACACTCGATTCAGGATATGCTGCGGTGG
CAAATTGGGCTTAAAAGGATCTAACAATGCCTGTTGCGGTCAAACAGGTT
ATAACACTCGATTCAGGATATGCTGCGGTGGTAGATTGGGCTTAAAAGGA
TCTAACAATGCCTGCTGCGGACAAACAGGTTATAACACTCGATTTAGGAT
GTGCTGCAATGGTCGACTATGTTAAATGATGAAAATCGTTTTTCTTTTTC
TGGTTTGTTTTGTTCTTCAACAAACAAGTTCAAATGAGTTGAAGGAAGGA
GAATCTCACAGCCGTGAACGCAGAGCAGTGTGTGGTTATCAAAGATATAA
CACTCGATTTAGGATGTGCTGCAGTGGCAAATTGGGCCTAAAAGGATCTA
ACAATGCCTGCTGCGGTCAAACAGGTTATAACACTCGATTCAGGATGTGC
TGCGGTGGCAAATTGGGCCTAAAAGGATCTAGCAATACCTGTTGCGGACA
AACAGGTTATAACACTCGATTCAGGATATGCTGCGGTGGTAGATTGGGCT
TAAAAGGATCTAACAATGCCTGCTGCGGTCAAACAGGCTATAACACTCGA
TTCAGGATATGCTGCGGTGGCAAATTGGGCTTAAAAGGATCTAACAATGC
CTGCTGCGGTCAAACAGGTTATAACACTCGATTCAGGATATGCTGCGGTG
GCAAATTGGGCTTAAAAGGATCTAACAATGCCTGTTGCGGTCAAACAGGT
TATAACACTCGATTCAGGATATGCTGCGGTGGTAGATTGGGCTTAAAAGG
ATCTAACAATGCCTGCTGCGGACAAACAGGTTATAACACTCGATTTAGGA
TGTGCTGCAATGGTCGACTATGTTAAATGATGAAAATCGTTTTTCTTTTT
CTGGTTTGTTTTGTTCTTCAACAAACAAGTTCAAATGAGTTGAAGGAAGG
AG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.1231MSTRG.1231Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1231.10.p1.exon2MSTRG.1231.10.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1231.10.p1.exon1MSTRG.1231.10.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1231.10.p1MSTRG.1231.10.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000006_pilongenomesc0000006_pilon:525208..526679 -