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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000092_pilon:817184..820702+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12308.1.p1 ID=MSTRG.12308.1.p1|Name=MSTRG.12308.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3519bp|location=Sequence derived from alignment at sc0000092_pilon:817184..820702+ (Clytia hemisphaerica_ch_hm2_pilon)
tttatttgtttaaCTTGTGGCAGAGGATGAGGTCTTTTACAAGATATGAT
ATTTGTGTtcaaattttgtcattattcTTTTTGTTGGTATGCTGCAGAGT
GATATTCTTACAACGTAAGTATCTAAGGGTTCATCCTTCTCAACTGAATT
GTGGTCAACAATTCTATCGGTAACTACTGTCTCGCTGTCGTGTATACAAT
TATGGCCGTAATATTCtagaaaaaagggaatttcccaggaattttcaaaa
ccacaaatgatttggaagtgctctaagttaggttggaagggtagagctTT
AACCCTAAGTCTAAACTTAAAACCTtagaatctgaggatccaaaagttca
aaaatggtccaataaggctcataatatagcctggaagtctataaacccga
gccaaattgaaatatccgattagattcgtagatttaaaaaatggcccaaa
atcgactttctcgcctgaactccaaattttgaaaaatcaggaaataagct
aaattctcaacagattttgaccatgattgtactctCTTTGGTGGTTGCAT
cagcaaaatacaaaaatattgcAAGTTCCTCTTGGAACGATAATATCGTT
ATTTAGAAAAATGTTATGCTGGAAGGATAGATCTCGAAAACAGCATTCCA
TCGAATCTTTCCGGCACTGATCATGGCGATTTAGAATTAAATATATTTAG
TGtccaaattgaaaaatatatatttgattTACCAAACCATGATCAGATAC
TCGCTTGTTCTCAGGGGGACATCAAATTTGTTATGAAAACGTTCAAAGCA
GCTAGAGCATAGAGATTATTGAAactattgattttattttataacaGTTC
CTTCATCAAGCTGTATCCAAGACAGGAGATCCCAATTTCTAAACGAAATA
TTTTCTTATGATGGAATTGGTAATGGAATCAAGCGTCGAGATGCCTTCAT
CACTGGAAAGATATCATATGAGAGAAAAGGTACCCATAAAAACCTTTTTG
AGATATTAACAATAGAACTCGAGAGACTCGTCACCTATAAAAAACAGCAT
CCACACGTCATTCAGTCCTTTTATCAATCCCCATTGGCTCCCAAACTGAC
ACACAACGCTGTTTCAacgctgtttcaacgtttttctaatgttcacaaca
tccatataacgttaaatgaacgttgaaaaacgTTGTTGCCAGCTGGTGTT
CAATAgttcttacccccccccccaatgaCTCATCAATGGGAGCCCCCGAA
AGGGCATTGGTTTTTAATCTAATAAATACACTCCTTCCGACACCCGAGAG
CACCAGTGGCAGTTTTTcgcataccttatcggggaaaaaaatgtcggggg
aaagtaacgaaaattttgagggggtgacgaattttttccccgatggttta
tcacccgaccaaaacttttacccgattccTTTTTCCCAGCCTAAAACTTT
TACCCGGTTTTTAATTCACGATATCCACGACCaagattttcttatttcaa
CAGAAAAAAGGATTTCTATCGTAGTTTTCCATTGTAAACGTTTCCAGGGG
TGTTTCTTAACAGaataaataaaatgactttCTTTTCAAACGAGTTCTTT
TGCCTAATAAACACAACAAGCTAAGTTGAAACTACAATGGtttgataaaa
ataacaatagtaACAAAATGTCGGTCGTCGatcaagtctttaaaaaaaat
tttgttcccCGCCCAaaaatttggtcggggaaaagtgatgagtttgaaat
tttggtcaaggaaaagtgacgaatttgaaatttcggtcggggaaagtgac
aaatttgaaattttggtcgggggaaaagtgacgaaagtgactctaggtga
cgaaatttttccccgacaaaaaaaaaccccgactaaataaaactccgaca
ttttctccccgataaggtattagcTCTAGAATTAGAGTATCAAATGCCgt
gttttctttgatttaaaaaagtttagATTTTGCGCTGAGTATTAACGcag
aatcataaagaaaataagcgaactaagggactggttTCGAGTATAATTCC
TATGCAACCTTATGTTAATCTGAAATCTTATTAACAAACCTTTTATTCGT
TCCAGCTCCTTTGCTTATTGGTATTCCCACCGTTTATCGatcttacaaaa
acaaaacaacctTTTACTTGGATCGTACAATCAAATCCTTGATCGAACCT
CTCTCAAAAGAAGATAAAAGACAAGTCAATATTCTCGTGGTTTTGGCTGA
CacagaggaaaataaaaaacggTTCATCTACCAAAAGCTAAATGACTTGT
TCCCAAACGAAATCCGATCCGGTTTAATCGGGATGATTGGAATCCCGAAA
CGGTTTTATCTTCCTCTCCATGATTTAACACCAACGTTTAATGACACAAG
CGAAAGAATGTATTGGCGATCGAAACAGAGTTTAGATTACGCCTTCATTT
TTCAATACGTTCAAAATCTGTGCGATTATTACTTACAAATTGAAGACGAT
GTTTTAGCCAATGACCAATATTTTGACACGATCATGGAAGATATAAATCG
TTTGAACAACGCTCGAAATAAAGAACCAGTTATCTTTAAGGGCGAAAAGG
AAACCCGCCTTAAACACAAGCCCTGGGTTATCTCTGAATATTATAAAATG
GGTTTTATCGGGCGCTTGATTCCAGCTCATTATTTAGATGTCTTTGCAGG
GTTCTTTAAAGTGTTTTATAATGAGTTGCCAGTAGATTGGGGATATCCTT
ACATGCTTGACATAATGGATCCTGGATTTAGTGAGCATCGACTCCATGTC
AGTTTGTTTACACATATTGGGAAAATTAGCTCATCAATtggtacatgaaa
aatatggaCAACACTACCgtatcacagacccactgggaacccttctcatt
cgaaaaattggccaaaatagcGTCCCCAGggaaaattatcttccaatTTT
CGTCCAtcacactgaaaataatcaaataaaccaatccgcactgcaaaata
ttatgctactTTTACCATCCCCGctcaattttctgacttgaaaacaaaag
aattgaaatccgcTATAAAAACTATGGAAAGTCGATCCTCATCGAGtatt
tttatcctcactggttgaaaaaatcctaccaggtctgtcAGAAGGGGGTT
TAAAGATGGACAACACTCCCGTATCATAGACCCGGTGGGAACCCCTCCCA
AAAGCTTGATATGGATTAGCGGAAACTTAAGCTTTTTGTTGAGCTTCACC
TAGGATGTTCTCATTTTTTCCTCTGTCTTTTAGTAGAATTCTCTTAAAGT
GTGATATGGTtgttttttgccatttttagacTTATCTCCGAAATACGAGG
TTgagatttttaagttttttgtatAGTATTGGCTAAAATTGTGCCTTCTT
acaatcttttttcaaatttatatgtgTTTATGAGTAGTAAATTCAAATAT
AAACTCTAGGCTACACCTAACTTTTTGCATTTATATTTTGATGGgtgtaa
ttttgatgttttgatgttt Coding sequence (CDS) from alignment at sc0000092_pilon:817184..820702+ >MSTRG.12308.1.p1 ID=MSTRG.12308.1.p1|Name=MSTRG.12308.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2961bp|location=Sequence derived from alignment at sc0000092_pilon:817184..820702+ (Clytia hemisphaerica_ch_hm2_pilon)
tatttgtttaaCTTGTGGCAGAGGATGAGGTCTTTTACAAGATATGATAT
TTGTGTtcaaattttgtcattattcTTTTTGTTGGTATGCTGCAGAGTGA
TATTCTTACAACTTCCTTCATCAAGCTGTATCCAAGACAGGAGATCCCAA
TTTCTAAACGAAATATTTTCTTATGATGGAATTGGTAATGGAATCAAGCG
TCGAGATGCCTTCATCACTGGAAAGATATCATATGAGAGAAAAGCTCCTT
TGCTTATTGGTATTCCCACCGTTTATCGatcttacaaaaacaaaacaacc
tTTTACTTGGATCGTACAATCAAATCCTTGATCGAACCTCTCTCAAAAGA
AGATAAAAGACAAGTCAATATTCTCGTGGTTTTGGCTGACacagaggaaa
ataaaaaacggTTCATCTACCAAAAGCTAAATGACTTGTTCCCAAACGAA
ATCCGATCCGGTTTAATCGGGATGATTGGAATCCCGAAACGGTTTTATCT
TCCTCTCCATGATTTAACACCAACGTTTAATGACACAAGCGAAAGAATGT
ATTGGCGATCGAAACAGAGTTTAGATTACGCCTTCATTTTTCAATACGTT
CAAAATCTGTGCGATTATTACTTACAAATTGAAGACGATGTTTTAGCCAA
TGACCAATATTTTGACACGATCATGGAAGATATAAATCGTTTGAACAACG
CTCGAAATAAAGAACCAGTTATCTTTAAGGGCGAAAAGGAAACCCGCCTT
AAACACAAGCCCTGGGTTATCTCTGAATATTATAAAATGGGTTTTATCGG
GCGCTTGATTCCAGCTCATTATTTAGATGTCTTTGCAGGGTTCTTTAAAG
TGTTTTATAATGAGTTGCCAGTAGATTGGGGATATCCTTACATGCTTGAC
ATAATGGATCCTGGATTTAGTGAGCATCGACTCCATGTCAGTTTGTTTAC
ACATATTGGGAAAATTAGCTCATCAATtggtacatgatatttgtttaaCT
TGTGGCAGAGGATGAGGTCTTTTACAAGATATGATATTTGTGTtcaaatt
ttgtcattattcTTTTTGTTGGTATGCTGCAGAGTGATATTCTTACAACT
TCCTTCATCAAGCTGTATCCAAGACAGGAGATCCCAATTTCTAAACGAAA
TATTTTCTTATGATGGAATTGGTAATGGAATCAAGCGTCGAGATGCCTTC
ATCACTGGAAAGATATCATATGAGAGAAAAGCTCCTTTGCTTATTGGTAT
TCCCACCGTTTATCGatcttacaaaaacaaaacaacctTTTACTTGGATC
GTACAATCAAATCCTTGATCGAACCTCTCTCAAAAGAAGATAAAAGACAA
GTCAATATTCTCGTGGTTTTGGCTGACacagaggaaaataaaaaacggTT
CATCTACCAAAAGCTAAATGACTTGTTCCCAAACGAAATCCGATCCGGTT
TAATCGGGATGATTGGAATCCCGAAACGGTTTTATCTTCCTCTCCATGAT
TTAACACCAACGTTTAATGACACAAGCGAAAGAATGTATTGGCGATCGAA
ACAGAGTTTAGATTACGCCTTCATTTTTCAATACGTTCAAAATCTGTGCG
ATTATTACTTACAAATTGAAGACGATGTTTTAGCCAATGACCAATATTTT
GACACGATCATGGAAGATATAAATCGTTTGAACAACGCTCGAAATAAAGA
ACCAGTTATCTTTAAGGGCGAAAAGGAAACCCGCCTTAAACACAAGCCCT
GGGTTATCTCTGAATATTATAAAATGGGTTTTATCGGGCGCTTGATTCCA
GCTCATTATTTAGATGTCTTTGCAGGGTTCTTTAAAGTGTTTTATAATGA
GTTGCCAGTAGATTGGGGATATCCTTACATGCTTGACATAATGGATCCTG
GATTTAGTGAGCATCGACTCCATGTCAGTTTGTTTACACATATTGGGAAA
ATTAGCTCATCAATtggtacatgatatttgtttaaCTTGTGGCAGAGGAT
GAGGTCTTTTACAAGATATGATATTTGTGTtcaaattttgtcattattcT
TTTTGTTGGTATGCTGCAGAGTGATATTCTTACAACTTCCTTCATCAAGC
TGTATCCAAGACAGGAGATCCCAATTTCTAAACGAAATATTTTCTTATGA
TGGAATTGGTAATGGAATCAAGCGTCGAGATGCCTTCATCACTGGAAAGA
TATCATATGAGAGAAAAGCTCCTTTGCTTATTGGTATTCCCACCGTTTAT
CGatcttacaaaaacaaaacaacctTTTACTTGGATCGTACAATCAAATC
CTTGATCGAACCTCTCTCAAAAGAAGATAAAAGACAAGTCAATATTCTCG
TGGTTTTGGCTGACacagaggaaaataaaaaacggTTCATCTACCAAAAG
CTAAATGACTTGTTCCCAAACGAAATCCGATCCGGTTTAATCGGGATGAT
TGGAATCCCGAAACGGTTTTATCTTCCTCTCCATGATTTAACACCAACGT
TTAATGACACAAGCGAAAGAATGTATTGGCGATCGAAACAGAGTTTAGAT
TACGCCTTCATTTTTCAATACGTTCAAAATCTGTGCGATTATTACTTACA
AATTGAAGACGATGTTTTAGCCAATGACCAATATTTTGACACGATCATGG
AAGATATAAATCGTTTGAACAACGCTCGAAATAAAGAACCAGTTATCTTT
AAGGGCGAAAAGGAAACCCGCCTTAAACACAAGCCCTGGGTTATCTCTGA
ATATTATAAAATGGGTTTTATCGGGCGCTTGATTCCAGCTCATTATTTAG
ATGTCTTTGCAGGGTTCTTTAAAGTGTTTTATAATGAGTTGCCAGTAGAT
TGGGGATATCCTTACATGCTTGACATAATGGATCCTGGATTTAGTGAGCA
TCGACTCCATGTCAGTTTGTTTACACATATTGGGAAAATTAGCTCATCAA
Ttggtacatga
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000092_pilon | genome | sc0000092_pilon:817184..820702 + |
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