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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000092_pilon:762116..766712- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12301.2.p3 ID=MSTRG.12301.2.p3|Name=MSTRG.12301.2.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4597bp|location=Sequence derived from alignment at sc0000092_pilon:762116..766712- (Clytia hemisphaerica_ch_hm2_pilon)
CGGAAAATTAATTATGCATGCGCATCATTAAGTGATAATTATGATTCGTC
TTTAAATACAATTCAAAATTATAAATCATCCTCGCTATTGCATTCACTCA
AAAATCATTTTAACATACACACATGTCAGAGAGATGGCTGATGGAGCTAT
TAATTACGAACAGTTGAAGGTGGTTGTGAAAGAAATCATTCAAACAGAGT
TGAGACCTCAAGTCTTAAACGTAGCAGAAGAAAGAGCGCAACAAGTTGCA
GATCAAACCTCTGTAACAAATTCTAATACATTAACAAAATTAAAGGAAAA
GCTTGAGAATAAAAGAAAAAGCGACAATGTTACTTTTTCAAAGGCTGGAC
ACCTCGATCAGTTCAAACATAATACAGAAGTTTTGGAGAAAATTGATGAT
GCACTTGAAGCTATCGAAACAACGGACGTGGAAGGAATAACAACTGCTTT
AAAGAAAGGTAAGCAATTACTTGAAACCAGGATAAAGCATCTAAGGATCG
CCGATGCCTACGGTTGGCTAACAGTTAAGGAATTTAAAGCTAATGAATTG
ACATCTGGGGAGGCAGAGGAGAAAAGACTAAAGAGGGCAATAAAAAACGC
AGAGATTGTCAAAGGCCGTTATAAAAAAACAAAAACTTTCCGATGATTCA
GATTATAATAAAGTAATAAGAAATAAAACCGAACAAAGAAGTCGCATGGA
CGAAATAGTATGCTACTCCTGTAAACGTGTTGGACATTACGTATCGCACT
GTCCCTTTTCGAATATAGTATCGCCTTCGTCTCTCGCATATTCAACAAAA
TCACATTCATCGTCATCAACAAATAAAAATTCGTCAAGTTCTTCAAAAAG
CTCGAAAGACGGTAAAAGTACCTCCGGATAAAAATATTCGTTATCACTTT
AAATTTCACAGTCAAGTTGCTTACTCGTGTTGAAAAATTGAAGCGTTATA
ATTCAAACGACTTTCCTTAGTATTATTTTATCTTTTATGAACAATTAAAT
TCATCGTGCTTGATGTACTTTAATCAAAAGACAGTAATTTCGAATTATGA
AATTCATTGTGTTTAATGTACTTTAAACCAAAGGACAGTCATTTCAATTT
ATTAAATTTATATACATGAACAACACTTAACGTGTAGAATGTAATTCAAA
TTTGTGTAACATCGTTGTTTTCTAAATAACTTTCGCCAATTTGATATCAA
GTTTTTGTTCGTTTTTTCGCTTCTCCAGAGAGATTTTGGGAATTTGAGCA
ATCTTCCGAAAGCGTCTCCGTTGCTGGTAAGATAATGAAATTTTCGCACT
TTTGGGAAAAAGATTTGAAAGCATCAAAATTCGCCCTGGGTGTCGTACGT
GAAGGCTATAAAATACCCTTTGAATCAAACCCACCACCTTTTTACGCTAA
GAACAATGCGTCCAGTTTAAAGAACGACCATTTTGTCAAAGACAGTATCA
AAAAACTTTTGGAAGACAGTTGTATTGAAAAAGTATCGGAGCCACCCTAC
TGCATCAACCCCTTAACCGTAGCAGAAAGAAATTCTAAGCTTAGGTTGGT
ATTAGATCTCAGACACGTCAATAAATTCATCAAACCAAACAAATTCAAAT
ACGAAAATTTAAAACAAGCCTCAGAGTTAATCGACCAGAACGATTTTTTA
ATCACTTTCGACCTCAAAAGCGGATACCATCATGTACCGATCAATCATAT
TTTTCGAACCTTTTTGGGATTCGCATGGGAATTCGACGGTAAAATGCAAT
TTTTTGTGTTCAAAGTTTTGCCATTTGGGTTAAATATAGCATGCTTAGTT
TTTACAAAGCTCATGCGACAATTAGTAAAGAGATGGCGTTCGATGGGAAT
TAAATGCGCGATGTATCTTGATGACGGTATAGCTGGGGATAGTTCACATT
TTTCTTTGATTCGATCGAGAGATAGGATGCTGCAAGACATGCAATCAGCT
GGTTTGACAGTAAACTTTGAAAAGTCGAGCCTCGAACCCGAAAAAAGAAA
AACATGGCTAGGTTTCATAATCGATACTGAAAAAATGAAACTCGAAGTCC
CAACAACAAAAATTCTGAAAGTCCAAAACTTACTTTTAGAAGCTTTAAAT
TGTGAATTTATTTCGGCTAGAGAAATTTCTAGAATAGCAGGAAATCTTAT
TTCTATGGCACAAGCTATCGGGCCACTTGTTTATTTATTTACAAAGCAAT
TGTACAAATTTGTCGAATCCAGTTTCTCTTGGGACAAAAAACGTCTCCTA
ACGTTGGGCTTTTCCAGAAAAAAACCGTGCACCCCCTGTTGAGGAGGTCC
AACCTTTTGTGACCTACCCCCTTGGAATTCCAGGCAATTTTAGGATCATA
TCCCTCTGGAATTCCGAATTTTTACAAATTTTCAATCATTACCCCCTTGG
AATTCCGCTTATTTTTGACGGATTTTCGTCTACCCTTATGGAATTCCACT
GCATTTCAAACCTTACCCCCTTGGAACGGAAATGGACCTCCTCAACAGGG
GGTGCACGATTTTTTTCTGGAAAAGCCCGTTTGATGTAAGACAAGAGCTC
GAATTTTGGAAGGAAAATTTAGAAGTCACGAAGAGCTTTAGAATTAACAC
ACAACCTGAAGTCACAAAAATCGTTTTTTCGGATGCAAGTGAAACCGGTT
ACGGGGGTTATGTTGTGGAAAAACTCGGTAGCATCATAGCGAAAGGGAAC
TTTGACCGAACCGAACGGCAAACCAGCTCGACTTACCGCGAACTTCTTGC
AGTAAAATACATTTTGCTATCATTTCCTAAAATCTTAGAAAACGAAAACA
TTGAGTGGTTTACCGACAACAGTAATATATGTAGAATCATAAATCGAGGT
AGCACAAAGCAACACTTGCAAAATCTTGCAATCGAAATTTTTAACATTTG
TTTATCGTCCAACATCGAAATTTACCCTACTTGGATCCCTAGAGAGTTAA
ACGAAATTGCCGATAAAATCTCAAAGACCAACGATACAGACAACTGGTCA
ATTGACAATGAAACTTTTGATTATATACTTAAAAACTACGGACAAATTAC
CATCGACCGATTTTCAGACAACTTAAACAAAAAATCTTCTCGGTTTAACT
CCAAAGAATATTGTCCTGGTACTTCTGCAGTTAATTCTTTTTCGTGCCAC
TGGGGAAACCATGAAATTAACTGGCTTTGTCCTCCAATAGCATTAGTAGG
CAAAACAATTAAACATTTAAGAAATTGTAAAGGTAAAGGCATACTATTTA
TATCCCCTTGTGGCCATCAGCATACTACTGGCCTTTATTGACATCAAACG
GTTTCGAGTTTGAACCTTTTGTAAAACATTTTTTAGTGCTTGATCCTTTC
TTTGTCAATTATTCAAACACCGATTCTATTTTTGACGGCTTTGCAAATTT
TTATTCTTTGGCGTTATTTATTGACATGTCCGCATAATAAATGAGCAAGA
TCTTAACAAATTCTTACTTTATTCTATTTTATGATGGTGACAACTTTAAC
GCCCCGTTGCAAGATGAATTTACTTCACATCACTGTCTCCGTTACAAATG
TGTTTTATGTGTCAATGCCGCTGTGCAACACCTTTGACGTGTCAATGCCC
CTGTGCAACACAACTTTCGCGTCAATGCCCCTGTGCAACGCACTTGAAGG
AGCAATCGTTCTCGCTGTGCAACACCTTTTTACGTGTCAATGCCCCTGTG
CAACACAACTTTCGCGTCAATGCCCCTGTGCAACGCACTTGAAGGAGCAA
TCGTTCTCCAGTTGATGATTGATTACTACCTTGAATTCAAGTTCGCAGAC
GTAGAGGTAACATAATTCTTGACTTAATTTATTGTACTTCAAATTTTCCG
ACAGATAATTACGCTCCAAGTTTGAAAGAGAAGTTAATGGCAATTAAGAA
TAAAAGATTTTTCAGAATTAGCGAAATCCTTCAAATTCAGATAAAGGAAA
TCACTTTTGACAATTTCGGCGCAACAGTTTTTTCTACCAAATTCAAAAAC
CGACCAAGTTCGTGAAGGTAATATCGTTTTCATTAGCAAGACAGGAACAA
AATGCCGCTTTGAAAACTTTCAAGGATCATCTTTCAAAAGTAACCAATCC
TTCCATTTACGGCTTGCACTCATTAAGATCGGGAGGTGCATCAGAGGCAG
CAAACAATGGTATTTCGGTCCGTCTCATTTCAAAACACGGTCGTTGGTCA
TCGAACACCAGCAGAAACACGTATATAAAAGACAATGCCGAAAAACGTTT
TAAAATTTCCCGTTCTTTAGGGATTTAGGCATTCCGACTTCCTTTTTCTT
TCTCGTGTTAATGCAAGCAAATACCAAACAAAAAGTAGAAACAACTATCG
TTTTTTATTGTTTGTTTCATTTCGAAAAGGAGAAATAGTGGAGAAACGAT
GTTTCCAGCGATTGAAAAAAGCTGGAAAAGCAGGTTCTCAACAATTTCGC
ACGGAAAATTAATTATGCATGCGCATCATTAAGTGATAATTATGATTCGT
ATGTCCAACGGATTAGAATAGGTGGATTAACTTCTCTCGTTGCTCCCAAG
AGAGATCCATTGTCTTCTCATTGTTACAAGAAAAATCTGTAAATGAC Coding sequence (CDS) from alignment at sc0000092_pilon:762116..766712- >MSTRG.12301.2.p3 ID=MSTRG.12301.2.p3|Name=MSTRG.12301.2.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=513bp|location=Sequence derived from alignment at sc0000092_pilon:762116..766712- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGATGGAGCTATTAATTACGAACAGTTGAAGGTGGTTGTGAAAGA
AATCATTCAAACAGAGTTGAGACCTCAAGTCTTAAACGTAGCAGAAGAAA
GAGCGCAACAAGTTGCAGATCAAACCTCTGTAACAAATTCTAATACATTA
ACAAAATTAAAGGAAAAGCTTGAGAATAAAAGAAAAAGCGACAATGTTAC
TTTTTCAAAGGCTGGACACCTCGATCAGTTCAAACATAATACAGAAGTTT
TGGAGAAAATTGATGATGCACTTGAAGCTATCGAAACAACGGACGTGGAA
GGAATAACAACTGCTTTAAAGAAAGGTAAGCAATTACTTGAAACCAGGAT
AAAGCATCTAAGGATCGCCGATGCCTACGGTTGGCTAACAGTTAAGGAAT
TTAAAGCTAATGAATTGACATCTGGGGAGGCAGAGGAGAAAAGACTAAAG
AGGGCAATAAAAAACGCAGAGATTGTCAAAGGCCGTTATAAAAAAACAAA
AACTTTCCGATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000092_pilon | genome | sc0000092_pilon:762116..766712 - |
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