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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000092_pilon:164392..174508+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12274.2.p1 ID=MSTRG.12274.2.p1|Name=MSTRG.12274.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=10117bp|location=Sequence derived from alignment at sc0000092_pilon:164392..174508+ (Clytia hemisphaerica_ch_hm2_pilon)
ttcctagccaatctgatacgtaaccacacccatacccaaccctaccaggt
cgcctgcaggtcctgacactattcccgcataccggatccgaaaaatagat
acatgtctttcgtctttatgaagaagccttcaccaaaTGGAAAGCAAAGT
TATAGAAAATGATGGTGGAGCAGTCACAGAATTTGCAGGATTATTCTACA
AAATAGAAGAAGATACCATGGGTTAAAATCAAGGTACCTACTATTGATGT
TTAATTAATTTGTAGTcctaaattttttgtttacctttttgaATGTGGAG
GATATCCTAAAATATCACCGTTTTTTATGTGCCCATTTAGTCTCAAGAGT
ATAAAACGACTATGAACTAGATATATTATATACACAAAGCCGACAAAATT
CTTTATTAATCTGCTAAGTGTACATGGGTATAGAGGTTCCTTCTTGATAG
GTTTTTGTTACTATCAGTTAGGTTCAGACGGGTTGGAGCTCAAGAGGGTC
ACAAGAATAAGGCTGTACCATACCGCATACACCACACCCACATTTTTACC
CTTTCTGCCTCCTGTCAGTCactcacactaggaaatctagctttcaagaa
aaaacaacatcagtcatctacaggatgtatttgcaacaacaaggatgaga
gctacctgaatcaagttcaagttcccaagacatttaattaaaacttgaaa
acttaaatgaaacaaaatgaccgattgcgaacgtgcagcagccagaatat
caaccaaccaaattttttcattcaattcccgagacagtgcATTGATTTTT
AAggcagtgtagctggaacctcgatattccaggattagaaaaagctatac
ctgttattttttttcttcaaagaatcaacaagccatcaacatcaataaat
tacacacattttcctcagaaacttttaaaattatctgccattatgacttt
cttgaagccgttccgaaattaaccaatcgggttaggtatcggaattccta
tgggagatcttttccgagatttataaaatagctaagtcggcaaaatcatt
tttttctaacGTGCTCAAGGgcaaaaggaaagtgatcgatattctttgaa
ggaaaaatgtcagagacaaacccaaagactaaaagatgtattttgttgtt
ggaaatcgatcctgtgaagatgaaaaactttctgctctgcgtttttttcg
gaacgctgaaaaaactctaatttcgattttccttaaggtaaagagtttgc
gagatttgggttaacgaggcaaaaatcgctaaaaaactggtaaaatcgta
atcctcaaaaatcgaagttcaaGCATCACtgtaaggccttgtttatacaa
taaagtaaaaataattccgtaCATGTAACACTACGAAACTGGAAATGTAT
TAAAAGTGTATTTAAATACATTTAAAATACGTTTTCTTCAATATATTGTA
TTTTaactgtattaaaaaaaaaacactttcaatACATTTCCAGTTTCGTA
GTGTAAATGgctcagtgtttgaggtccggcaaaatttctgggaaatagcc
tatccggtgatgcgcggatctaggtgggtttcgtctcccccgtagatctt
tttcttgggaagttgatcttcaaattagtttttaagCTTGgcttggctga
aattttttcatctatggctcaaattttaggcaatttctcatagtttttga
aaatgttaatttcattaaaaagcgctggtttattttttcatgaatccttt
tagaagttttgcagcgcatttttttgcttgcgagtcaagtaaaagatata
gcgctttcacagcattaatctttgatacgcatttcggttggacgctagtg
tgactaactgcctgtGTGATAATAAACTTTTGGGATCCTTGTTGGCAGCT
TGGGAAATACCCAATacgtgtgttttgtttttgataaaaacaagCTCTAA
CATTCTTTTTACGCCCCCCTGACAGCTGACAATTAGGCTAGGCTAGACTT
TcctcttttctcttttccaTTCCAACAATAAAATGTTTACAGAGTTGACA
CATAATACACATTGGTAATTAATGGTGAAAGACAGCTGCAAAGAAGCCCT
GGGAAGCAATCattagaagagaccacttttgtttttgttgcagatttcga
tataactTCTCACAGAGATTATTTGTCAATGTGTTGCGTttacttgtcag
cattgtattgttttaAAAGCAAAGATTAAAGAGGTAAGATTAGCCTAGTT
CttaggcgctgtggtatagtgggaAACGAGGGGAAACGACTTGGAAACAA
GGGGAAACGGCAGAGAAACGAAAGAAGTCAGAGGGAAACGACTGGGAAAC
AGGAGAAACAAGAGGGAAAAGGGAGACAAAACTGAAAAGCATTGGAAACC
AAGTCATTTTCCATCTGGAAATCAAAGGGACAGGTTGATTTGTCAATATT
GGATAGCTTTTTCAATTTAGAAGATCTTTACTTAAGACAATTACATTCAA
CTGGAGGTAGCATTTAGGCACAGATATCAATATATTTACCGCGCAGCCCG
GCGGAAACCCGGCGGTATTTCTCATTCGTCAGAACTTGTCTAAAATTGAT
AGCAATTTTTATTAGAATAATTTACCGCCGCCGCCGGGTTTCACGGTGTT
TTGCGGCAACCCGCCGGtaatcaacatttttcattagaataattcaccgc
cgccgccgccgggttTCGCGGTAATTTGCGGAAACCCGCCGGCAAATGTC
ACTTTTCATCAGAATAAtttaccgccgccgccgccaCCGGGTTTCGCGGT
AATTTGCGGAAACCCGCCggcaaatttcattttttattaaaatgtttAGA
GTTTGGTCAAAGATAATCGTTCAAACCTTTTTACGTTCATTTATGACATA
GGTGTACGTTTTATTGTGTACGTCTCATAGAGTGagcttaaaaaatttca
aacacatttaaaataaagttataaaataaacatgattagtatttaaaact
ctatataaatcaaatattaaaaaaaaacaacgttaAAACCATTTAGAAGA
CGcaactaaataaaaaaacttactgCAGTGactttaataaaacaaaatta
aactTTCACTTATTACCCTCATCCCATCGTACTTAATCTCAAAAAACCCT
TCTATATAATAAAAGCGATCCTTCTCTTCATATGATTCTCAAGTTCACAG
AGGTGAGACACGGGTGTAATTCCACTACTTTGTCAGCCTTTTGTTATGAC
TATGatcaataaatttaaaaaataatagtcTCTTGCAGTAACTCAACAGT
AACTTTCGAGTAGAATATTTGAATCGATTCAATTTAGAAAACGATTGTTC
CGCCACTTCGGTGTTCATGTCAATGACCTTTTGGAATTTATCGAGATAGG
GATGATATAAgcaattatttcatttttcaaactcaagtTTAAGTCTATGC
GCTGCCAAACAATATCTATTTTCGATTAATAATAAGATGgactttgattt
ttgatttcataaatttctttcattgaGGCTAGAATCCTATTGTGGTTGTG
TCTAAACTCTTTGCTTGAGCCTATGATCATATTGTTGTAGGTGTTTGTCT
ATTACTATTGCGGTAGTCTCCGGGTTTCCGCCGGTGATCGTctattaccg
gcggcggcggcaGCGGGTTTTGAATCTAGAACTTTCTTTGAGAATAGAAA
CCTATTGCGGTAGTCTGCGGGTCTCAGCCGGTGATCGTatattaccggcg
gcggcggcaggttttgaatttagaaatttctttgagAATAGAATCCTATT
GCGGTAGTCTGCGGGTTTCCACCGGTGATCGTCTATTACCGGCGGCAGCG
GGTTTTGAATTTAGAACTTTCTTTGAGAATAAAATAATATTGCGGTAGTC
TGCGGGTTTCCGCCAGTGATCGAATATTACCTGGGTGGCGGCGGCGGGTC
TCGAATTTAGAACTTTCTTTGAGAATAGAATACTATTGCGGTAGTCTCCA
GGTTTCCGCCGGTGATCGTATATTACCCGGCGACGGCAGGTTATCTATGA
CTAGAAATCTATAGCGGAAATAGCAGGAAATAGCACAATATCGGCGGCGG
CGGTAAATAAGTCAAAATCTGTGGTATACTCCATATACTCTTCcgttatt
ttcattgtttaactatttttttaaattctgggTGCAAATTATCCTACCGG
ATAACAGGACCACAGCTCCAAAATCATTAATAATttatctttgaaaactt
aaagtCTGATACTTAGGGTAGGCAATTTCTTAGCTTTAATCACTCCCTGC
ACTTCATCTGTATCATACGTTAAAGCACTATGATAGAAAAGAAACGAATA
AGAATTTGTTGGGCCGGTCCACcggaaacaaatttttttattagaaatca
tGCTTCATAGTTGTTTACAGTCTACACAATTTTGTGGCTGAATCATATTG
ATTCAACTCCATAGTTGACACGAGAATAGATTGTACGTTATAAAGCCGAT
CAAGGCCAGTCAATATATTGTTGTATTTAGGTATGCCAAAAGAACAAAGA
ATGAAGTAACTAAATATCTCCCCTCCCCTCTGAAAGGTGAGTAAGTCCTG
TACATTGTGTATATACATAAACTCCCTGTTATGCTTATTCCTTAAGTCCG
GTTTTGTTGAAACTTTGCAGTTGTTTCAATACATGGAATGCGTTTAGTCG
GTTGTGCAATGAATGGTGGAGCCTCTGGGTTCAAACCTGTCAGAAGTTGG
ATTCATCTTGTTTGCATTTAGGTTGATCTTGAGAAACTTGACGATAAGGG
AAGGCTTCCACAACTTTACCAGTGCAAATCAATCTTTAGTGTCCACGAGT
AGAAGCACCCTGTAGCCGACATGTAGTGGTGGTAGATTACGCGGATTGGC
TGTCTCGTTTGGTTTACTACTGTAAATTgcgtttttctttgaaagtgtTT
CGCTTGGAGAAAccacttttttttgaatttaaggtGTTCTGAATGTGTTG
GGATGTGATCACAGAGTTGCCCATGAAAGAGGATCTGGGCAGGACTCGGT
CCAATTCCTTGATGTGGAATGTTACGATGTTGAAGTGATGCACGGACAGA
TCTGCCATTGTCTAGTGAACTTCTGACTTTGTTGCCAAGGAATAGGATGA
TTCGTTTTGCTGACTTTACTGCAAGCTCGACACTCCCGTTAGATTAAGGG
TAAGAGGCTGATGAAATTTGAGGACCTATGTCCcattgtttcaaaaatgt
ttcaaatataGCTCATGTGGGCCCTAAGCCCACCATGGCTGGATGCTTCC
TCTGGAACACCGAATGTTTAAACAACTCGCGGAGACATTTAACAAGTGAG
TCAGATTTGGTATTTGtaggaaaatggtaaatttcAATTCAGCAGCTGAA
TCCGTCAATCACTACCAGATACGATTGTTCCTCTAATTCGAAATAATCTG
CACATATCTGTTGGAAGGGCCATTTTGGTTGGGGAGAATTAATCAGTGGC
TCACTGGTTGACTTGGTGTGATTTGGTTTCACGATAGGCGCATGGATCAG
TGATTTCGAATATCCATCTTCCGACCAGTCTGGTTGAAGGCAAGTGATGC
GACTGGGGTCAAATGAACGAACTCCTTTCTGGATATTGTCAACAGAGGAG
ATTCATCATCAAGGGGCACAGAGTGGTACCCATGTCAATCGAAAATGTTA
TTGGCAGCCACCCAAAACAGGTCAGAGTTGACAACAGTAATTTGCTTTGA
ACAAGGTATTAAAAATTGTTCCTTTTTTAAGTTCAGTTCAGGTAAATGTA
ATGTTCCTGCTAGACAAATGTTGGCTCCGCTGTCAGGGAAAACTTTACAT
TAGGATGGTGGGTTTTGTTGTAAACAAGGTAAGGAATGGGAGATTGATAC
AGTGGTTCTGTCCTCCATTGCTTGGACAATTCTTATATTGCACGAGCATG
ATCTTTCTTTTTGGTCTGTCAACAGACTTTAGCGAAGTGATTAGGAATAT
CGCAGTTGTGACAAACGGGCGATCATTGGCTCCTTTTTATCCGTGGGCGA
ATGATCTGCATCCTGAGCATGGTCGTTCGTTGTTTGTACCTTTGCTATCA
CGTTTGTACTGGAATTGCTTAGCTAGCATAACCTCCGATCGCTGCAATGC
TTATTGATCACATGTTGCGGTTTCTAGGGCTCTGACGTGTTTGATAACGT
CTAGATTTTATGTCTGAGCCaatttcgacttttgacgacaaattttatca
ttttcattaattttcttttttaagccaattttaagtcaaaatattaTATG
CAAACTaagtttccaattttgaatAACAAAGCTTAAATTATCAATTAATT
CTTGTTAAATGcttgcatttttcaaagaatatttcaattttaccaaATAA
TACAAGGCCATTCCAAGAAAGCATCAAGTGCAAAATGGATATCTTTCTGA
GTTTGAGTTTGACTGAACCTGTGGGTGGTATATTAAATGATGCATGATAC
TCATTTTAGTTTCCCTTCTCTGGAATGGCTGTATACCATTGAAAAGAAAC
AATTTATGATTTTGTATGTACATATTATAGAGCGCTAACAACAAAACTAC
TTTCATGCTTTGAAAGCTTTTTTGGATActcaaatttttaacaaaatttt
ggTAACTTTGCTAAGCCCCACAGCCTCCCATTGTATCAATACCTTTAAAA
TACTGGATGTTCCAGTGGGTAGAACTTGAGGTTCAGACACTTCTTAAATT
CGTTTTTGGCAGTtctttttaaactattttttttcatttatcgaTTTCTT
TAAGTGCAAGAATCTTGTTCTGTAATTCTTCTTCTGGAATTTTTCTTTAA
gtaaattttcccaaaatttcaagttatggcAGGTTATAGCCATTTTTGGA
TTTGAAAGCTTGAAGTGTTTTTCAAATTCCAAGATGTCCATAAAGAGCAG
AATTCTGTAAAACTTTGTCAATTTACCagtataattaaaaaaaaattaaa
cagcaaTTAGCATCAAATCTGCTTTCAGTAAGTTTTCTGAAGTGAACTCT
TGAATTGACTTTATTCAAGGGATAATAACCAGGacatattttagaaaaag
aggGCAGTGTCCGATGGCTAATTAAAAGGCCACATATACGAGCGAAGCGA
GTAAATCAATCGCGTAGaaaaaaaGAGATACAAGGGCAAACTGATGCAGG
GGTATTCTAAATTACGAAGCAAAAAGAGATACAAGGTCAAACTGATGTTT
TGAAAGATATAGGCAAATGATTCATAGCCAGTGTTTTACAGCCTAATAAT
gtataataatttaaaaaacttgGAACAAGAAATACATACCATAGATCATT
GATAGATTTGCAACCCTCTGCAGCTTTGGATATTTAGGCACTTTTCTCTT
TTGAATATCTGTCCTTTCTTGGCATTTTTGCACAGTCATAAAACAAATCC
TGTTACTCTCATCAATTCGAAGTAACTACTTACAAtcaggccaaaaaaaa
aagtagttttgtttccggaaatgcgggtgacgaaaaaaaatctcacccgg
gcggccggaaaatattattttttttcaattttcctagaaaaactctaatt
gacgtgtacgaaaaaataatccaggttcgatgtctctttacttgaaaaaa
cgaaattttaagaagaagctgTACTCTAAGGTAATTCTATTCACAACAGC
ATAAAacaggaaagtagaaaacatttgtgacagaagattttctttttcaa
aacacaagtgacatacgtaaatctttgaatacaatcgttaaatggatcgt
aaaatcgtaaaatggaaaataaactctttataaatctttgaatacaatcg
ttaaatggatcgtaaaatggtaaaatggaaaataaactctttatatatct
tttttattgCGACGAGCTCgctgtttttttctatttgcagCCGGATGaga
tatattttttccaaaaaaaagttcacccggccgatttccggaaacaagac
tacttttttttttggcctcaGCGCTGCTACAATCTACTGGAACttgaaat
tgttttcaaaaagctaACTTTTGAATAGCATtgaattcaagaaaaaatta
tatataagaAATATTATTATAGTATGTTCCGTAGGCTTTCATACGAggaa
acaaaagttaaaaacggagtgcttataaaattttataaacaggTGATAGA
GCGGCAAAAGAGTAAATAATTTGATTTCAATGATCACAAAAACGCTTGAA
ACAATACAAAAAGGGAGGAAGCACAATACAAGTtacattaattttctttt
tgactctacattttcgagggcaaaggcttttcatttttggattctttctt
tcGTGTAAATGGATTGTTTTAAGAAAGGcatttgataaagaaaaaaaggc
aCTTGGCTTCaaaaaaaGGGCCCTGGAACCTTTGACCCCCCTGAACAAAT
ACCCTAAAACAACTTCTTTTACAAatctaaattttcgaaaattttaagGG
TTAGGCAGCCTCCGATAACCGGACactctttttgcctaaaaaatGGCCTG
ATAACTGGGATTGTCaccatttatttttgaataggAGCAATTCTCCTTTA
AGGGAAACTATAGGGGTACCATAGAGGAGAACATAGAAACTTTCAATCCC
ACTTTGCACCACAAAATATTTATCTCATCTATTCTTTTAGATTGTACTCA
TTCTACatgcattattattattatggcATATGATAACCACAAATAACCCT
TAGTTTTTCCACAAAGTCtgttgttttgtttataaataattAGACATTAG
ATTaagaaaacacaactcaaacaAACGAGGGTATGAAAATTGTCTGATTG
TATGTCTGAATACATGAAGTAGGCATTGTAAAACAAGATGCTGACAATCA
GGTTAAAAGGCTAAGAGTGTCAGATTACTTTTCTATTGTCCTTGTCAAAT
AAGACGATTTGCTATCtttttttCTAGCACATAGTATGGAAAAGAGAAAC
AAAGTTGGACCTTCACCTCAAGCTATTGTATATTCTTCAACTATCGTCTC
TCCAATGGCTACAGAAGCTTCCCTTTCTTCAACTATTTCTGCTGCTATAA
ACTCTTCAAACTTCTCCCCTGCAGGTTAGTAAGATATTCATATAATACTT
TTACACTTATCTCCCTGTCAATATATTGGTGTATTATTCTGGGCACTCAA
GCTGGACTATTTAATAACTGGCTTAGAAAATATAGCCTGAATGCTGAAGT
TTTTACATGAGACTGAGAGATCttcatatttgaattttttgttaatcAAT
ACTTTATATTATTACCATGTTCATTTTCAAAGCCTACATAATATCcaaat
gaatttattttaatAACCTTACTAAATTACACCATTTTCTCAAGAAATGC
TTTAGTTGACGTTATTTATATTACAAGTCCATCCCTTGAATATCTACTCT
AGATACAATCCCTTCCGAAAGCACCACAGTCATAACTGCAGCCCCTCAAG
CCCCTCAACAAATCCTTTTACCAAACACACCTCCTGTAAAGAATGCTGTT
GGGCATGCTGCCATCCTGCCCATTGCTGCCAACCCATCCCTTTCCAGTCA
AAGAGGAAGCCAAGGTATTCTTTACATTACCCATCATCCACCAACCACTC
CACTCTTTAGCCACAATCGTATTTTGTCTACTGTGTACTCCACCAACAGG
ATTTTGTTGTCAATACAGAATACATAATTGCTGTTTATGTGTCTTAAATT
CTTCTCTGTCATCCACAAAAACTCTAATTCTATTCTAAATACAGTTTCCC
CCCGTCATaaaaaaaCCAGCAAATTAATTATCCTTGTATTAAATTACAGT
AAGTGGTAATTGTGTTGTCTATCTCATTTCACTATCCTTTACTTATAATT
TCAGACCTTCAAAGAGGCGTTATTTATGCGTTGAATCAGTACTCGCCATT
CCTGAGTCTCTCAAGACCACCTACCAATGTTCATCCTTCACTCTCTGGAG
TGGACAATGAACACCATAGTAAACTTGGTCCAGAAGATGTAGCAGAGGTT
CGTCAGATGACCAGTGCTGTTGCAGCTACTTCTTTCCATGAGCATTCAAG
ACGATCTGAAGCTGGTA Coding sequence (CDS) from alignment at sc0000092_pilon:164392..174508+ >MSTRG.12274.2.p1 ID=MSTRG.12274.2.p1|Name=MSTRG.12274.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=702bp|location=Sequence derived from alignment at sc0000092_pilon:164392..174508+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAAAGAGAAACAAAGTTGGACCTTCACCTCAAGCTATTGTATATTC
TTCAACTATCGTCTCTCCAATGGCTACAGAAGCTTCCCTTTCTTCAACTA
TTTCTGCTGCTATAAACTCTTCAAACTTCTCCCCTGCAGACCTTCAAAGA
GGCGTTATTTATGCGTTGAATCAGTACTCGCCATTCCTGAGTCTCTCAAG
ACCACCTACCAATGTTCATCCTTCACTCTCTGGAGTGGACAATGAACACC
ATAGTAAACTTGGTCCAGAAGATGTAGCAGAGGTTCGTCAGATGACCAGT
GCTGTTGCAGCTACTTCTTTCCATGAGCATTCAAGACGATCTGAAGCTGG
TATGGAAAAGAGAAACAAAGTTGGACCTTCACCTCAAGCTATTGTATATT
CTTCAACTATCGTCTCTCCAATGGCTACAGAAGCTTCCCTTTCTTCAACT
ATTTCTGCTGCTATAAACTCTTCAAACTTCTCCCCTGCAGACCTTCAAAG
AGGCGTTATTTATGCGTTGAATCAGTACTCGCCATTCCTGAGTCTCTCAA
GACCACCTACCAATGTTCATCCTTCACTCTCTGGAGTGGACAATGAACAC
CATAGTAAACTTGGTCCAGAAGATGTAGCAGAGGTTCGTCAGATGACCAG
TGCTGTTGCAGCTACTTCTTTCCATGAGCATTCAAGACGATCTGAAGCTG
GT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000092_pilon | genome | sc0000092_pilon:164392..174508 + |
|
