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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000091_pilon:1257665..1262843+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12259.1.p1 ID=MSTRG.12259.1.p1|Name=MSTRG.12259.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5179bp|location=Sequence derived from alignment at sc0000091_pilon:1257665..1262843+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGCTGCATGGCTTACACAAGAGGAAGAAGTTATTATAGCGTACAGTTGG
TAGGAGAAATTCGAACATACATGATGGAAATggtgtaattaatttttttt
ataattggtCTAATCGAAACTACTCATTAGCTCAGGGTGATTATCAATTA
GCATGAAGATGGAGCTCTGACGTTCTAAGCTAGACCATTTCTAGAAATTC
CTCACTTAATATGCTTCAGTTTCACTTTTTGAGGACTTAGATTCGAAACT
GAAGATTCTGAAAATTGCATTGTAAACACAAAAAGGTAACTTTCGGTTAT
GCAATAGGGAAAATCTGAcagacattttgattttttttttatgcgCATGT
ATTTGAGGGTGATTCTTAAAGTCTATGCGGATATCGAAACTACGCAATTG
ACAGACACAATTAATACTTTTGTTGTATTCTTTGttttaattataaaaaa
gaTGCATTTAAAGCATGACTTTACATATATCTCTGAATACGATAGCTAAA
CACTGGTGTGCCAATGAggttggaaaaatttatttgttttgatttgtcta
AAATTCTGTCAGTTTACTTCCTTCGGAACTAtttttttGCTGCACGTAAA
AATAGCTAAAAGAATACTTTGCATTTTAATGGAGTAAAAGTACGTCGACT
ATAAAGTACGTTGTAAGATTTTACAAGACTCTTGGCCAAAACACTAAAGT
CAGACTTGGGTGAAAACAGAGCAACATGGTTTAACTCGCCATAAAGATTA
ACTGTATGTGTTTAGTGTGTGTGTTTAGTAAACTAAACTTAAGTAAACCT
CCGAACGATTGaattttactttaatttattgaattttattttgccATATT
TCTTCCttaaaatacacgttttctttcaaataagaacatttgaaatttCA
TAATGCTTACGTCTTATGTTGAAGCTTACgtcttgttcttaaaatttcct
TAATTTCACCAATATTTAGTATTTGtttgcaatttcctaagaaattcaaT
GGTTTAGAgccttaaaaatctttaaatgagCTTAATtcattcttaatatt
ttttggccaatgaatccttatgctcttatatagtttgttcttataaaaaa
gaacgtgCAGAAGAATAGACTTGACCATAGTTATTAAACTTATCTTTTCT
AAAGGAAGATTCTTTTCTTTGCATCAATTTGTCACTACACGGTGtgttgt
ttattttcttttgtagaACTCACCGAAGTTGAAGTTAATCGCACTATTAT
TCTTCTTTTATAGCTtataaaagaatgaaaaggaaTTTCTATGAATTATA
ATTACATCAAGACATTGTCAATCTTAAAAAGGAAGAGGAAGAACctatta
taagaacaatcaaGAAAATAACAATACATTTCAATACGATAACCCCATAc
gcccgcggcaatttctattgtTTCCAAAAGAGCATTAATATCGTTATTAA
ACATTTTATGACTACATAGGACGTTCACTTTAAACTGAAGAGTCAGTATA
CCTTTTTATCGGGTGATGAACAGTGGCCATACAGAGGACAATAcagataa
aaagaaaatgttgtCCGTGCAAAGGCCGTCATCTGCAACACATTGCGCAT
GCTGTACGAACCATGATGGAGGATACACCAATGCATCACATTCACTAACT
TCGCCGTTTTCTCGTTCACCAACAAGCTCTGGATCTGCAATCAGATTCAT
ACGACAACAGAGTTTTGACCAACCACCACACCAGAAAGgaccaacaaaaa
caaagattttcacACCAAATATCAACCTAAGAGATCtttttttATCTGAA
GGAACATTTTCCAATTCTTCCTCTCAACTCATAAGTAATAATCGGAAACG
CAAGTCGACTGAAGAGAACCAGCAACTATCTCATTCACCAAAGACTACAG
AACCGCCACCCTTGTTCAAATCAAGGTTAACCGATCATCTTGCTAACGGG
TTCAACGCTTTAGAATCAAGCAACAGTCTGTTAAAGAACACTCCAAcaac
aaaatattataaatatcAACAACCAACCACTACTTTATCCATAGTTAAAC
CGAAACACCATAACCCTGGTCAATTAATTCGAATCCAACATTTTGAAGAA
TCGCACAAagagaaaattgagaaatttccaATGACACGAAGTTCACCAGG
ACCTTCAGGTTTCAACTACGAATTGAAACAAGAACCTTCTCAAAATTTAC
CATATGATATCCAatcaacaaatataaaatacgAGAGACGTTCACCAAAT
ATGCAATCTCCCTTCGAGAGGACCAACTCACCATATCGTTACCCCTCACC
ACATAACAGTCAAAGAGCATCACCTAATCTGCAATCATCAACGACGATAC
TAACTTCCCCACCACCTTTAGTTCGAACAACGCCACCACCATCAATGCCG
CCACACACAACACCATACGTGGGCGGTGCATCGAATGTAGCATCAGTGAG
ATACAGGAGCTTTAAGCAACCCAATAGTTTTGATTCCACATCAGCTAGCA
TTGATTCATCTCTTAGTGGAAGCGATGAAGAGGAAAACGACTCAATGGTT
TTGATGAAGCCAAGACCAACTCCAAGTAGAGTAGTCGGTAAGAAGAATTT
TTATCATTACAACCcctctgtctcagtgacccggtgagaaCCTTCAAGCC
AGTGGATAGAAgctaaaaatgctaaaaatgttAATGGGGATAAATAATCA
ACTTTTTTATTGAAGGGAGATTTCAAGCTATCTTTTTAGCAGCCAAAACA
TTGGTTGGGGTTCTCCAAATCTATGTTTTTGGATCTCGCCGGGCCAATGA
TGGGGATGTgttctctctttttttctttttttttcatccgAGTATACCAT
GAATATCGAATCATATGAGTGATTAAACTTTAGTACCTTTTGATTTAAAC
TTTATAAGTATGATTTGTGGACAATGTCATTTCATCATAATAGATTATCT
CCCAAATTATCTCTAAGGCAACTTTGTAGTTAAAAAGGTTGTTGGGTGGC
AGGTTCTTTTGTTTCATTTAcactaatttaaaaaataaaaacaattcctC
GTTGGTGGGCATTCTCAATTAAGAATATAATTAGACAAAATGAAGAAAGT
TTTAATtccaaaatgaagaaaagtgaaaaattttacGTAACAGAGGCAAC
AGCGATTAagtagaaagaaaaattgattatgtttttttcttaaagaGCTT
TTCCTTGCTACAAAATATACCATTTAGGTGTTACCGATAGTTTTCTCTTG
TTAAAGATGGTATCTATATGCGGCgggaaaaaaaacaatatagttcctta
ctttttttttgaaaaacgcGGAAAGAAAGCTTTATAGTGTATCCCTTCCA
ATTTCAAAGAATTTCCGATTAAAGATTACAAAACTATCTATTctagtcta
ttcacgataagtgtgcactcttttttcttttacctataacttttgaagga
attcttcaatcttcataaatttggtatcgttggagagatatttgtgagtg
gaacaatttaaaatcaaaaagtcttttaagaaattctaaaaatgaagatg
aaaatgaagaagaaaaaatgaagatcttttagaaaagtgctataaccaTC
ATTTTCACttaagtgaatccttgatcatcgaacgtcatcactgaaCAGAC
TTTAGAAACAATCATGGCACGTCATGGCacataaaaaagttattttcgta
TTGaaaaaaaTGCTTAAATTCCGCATTCTGCATTAATAATTCTAAAAGCG
TAAATAATTATCATTTCATTTGATACTTTaccaaagtaaatttttttttg
actttcccAGTTATTTGATCCATTTGGACGAAGTATATTGCGAAATACTT
TTATTTGTGAAGGAAATATCATTGAGACAAACAAACTAAAAAAGTGCACT
AAGTAAATAAGAATTCTTTTCTAGACGCAAAttgattttgggattttttt
gtCTAGTACCTTTCCCGTCATGGGACctttattagcgagtttatgtattt
acccttttgaggacggtaaagtgactaaagcgatttggaaaacCCCACAG
Ttctgccccgcaaaatcgaggatggtaaaagtgctgatttaccgtcgtcc
tcagttggtcaggaccaagaaaaattagaaccttacggtctccgtcacag
aaaaacacacatacataaactcggtattatttacaataagaatgaagaaa
gttaatttttttcccCATTAAACTGTAAGAAAATTCGTCTTGATTTCCCG
GTGGTATAATTTATTAAAGTTTCAAGTCAAAGCtttttttGTTAGTGTCA
AATTTCATATTGCATGGCACTCGAATTAAGAGACACAATTGAACGTGTAC
ACTTAAAATACACGTCATAACAAAATGAATACCATTCCAAACTTAAAAAT
TGTTGTCAAGTATTTTGAggactttttttaatgagaacaCATTATGAAAC
TTAAAGCAAATGTTTTAAAAGCCAAGCAGGATCACCATCATAATATAAAT
CTTATGAAGATTTTAGGTAATTAATCAGGAATTTAAATAATATTATAAAA
CACAATGTtctaatgttcttaacttattcttatttttacagaacGTGCAA
AGTATGAACGTACAAAATACGAACGCACAATAAAGTTGTACAAATTTTTG
ATCGACTTATTAGAAGACCAACACCCATGTGTCATGTGGAtcgatcggaa
aatcgggatcTTCAAAATCACCGATTCGGAACAATTAGCCCAATTATGGG
GTGAAGTCAAACTTAATGCTTCGATGACGTATGAAAAACTTGCCCGCTCT
TTCAGACATTATTACAAGAAAGGAATCTTAGATAGCGGAGAAACTGTCAT
TTCACCGGTATCGAAAAATGGTAAACGCAAACTGTACTATAAATTCAGTG
CAGTCACCTTAAAGCGTTTTTTAGATATTGATCCTGAATAAATATTGCTG
ACTGATGATTAGTCACTATCTGTTTGGCAATCTCGTACCCAGGAAGTCTA
TTTATATTACAtgggattaaaaaaaaatgcccTGGAAATGTAAAATCTAC
TTTTGATCTTTTATTCATTTATACATATAAATCTTTATAAATCTCTTATA
GATAGTTTTATAAGAAATATTgtaaatattataaaataaCTATAAAGCAA
ACACAATACAGTTATGTTACAGTTAATAA Coding sequence (CDS) from alignment at sc0000091_pilon:1257665..1262843+ >MSTRG.12259.1.p1 ID=MSTRG.12259.1.p1|Name=MSTRG.12259.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2844bp|location=Sequence derived from alignment at sc0000091_pilon:1257665..1262843+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACAGTGGCCATACAGAGGACAATAcagataaaaagaaaatgttgtC
CGTGCAAAGGCCGTCATCTGCAACACATTGCGCATGCTGTACGAACCATG
ATGGAGGATACACCAATGCATCACATTCACTAACTTCGCCGTTTTCTCGT
TCACCAACAAGCTCTGGATCTGCAATCAGATTCATACGACAACAGAGTTT
TGACCAACCACCACACCAGAAAGgaccaacaaaaacaaagattttcacAC
CAAATATCAACCTAAGAGATCtttttttATCTGAAGGAACATTTTCCAAT
TCTTCCTCTCAACTCATAAGTAATAATCGGAAACGCAAGTCGACTGAAGA
GAACCAGCAACTATCTCATTCACCAAAGACTACAGAACCGCCACCCTTGT
TCAAATCAAGGTTAACCGATCATCTTGCTAACGGGTTCAACGCTTTAGAA
TCAAGCAACAGTCTGTTAAAGAACACTCCAAcaacaaaatattataaata
tcAACAACCAACCACTACTTTATCCATAGTTAAACCGAAACACCATAACC
CTGGTCAATTAATTCGAATCCAACATTTTGAAGAATCGCACAAagagaaa
attgagaaatttccaATGACACGAAGTTCACCAGGACCTTCAGGTTTCAA
CTACGAATTGAAACAAGAACCTTCTCAAAATTTACCATATGATATCCAat
caacaaatataaaatacgAGAGACGTTCACCAAATATGCAATCTCCCTTC
GAGAGGACCAACTCACCATATCGTTACCCCTCACCACATAACAGTCAAAG
AGCATCACCTAATCTGCAATCATCAACGACGATACTAACTTCCCCACCAC
CTTTAGTTCGAACAACGCCACCACCATCAATGCCGCCACACACAACACCA
TACGTGGGCGGTGCATCGAATGTAGCATCAGTGAGATACAGGAGCTTTAA
GCAACCCAATAGTTTTGATTCCACATCAGCTAGCATTGATTCATCTCTTA
GTGGAAGCGATGAAGAGGAAAACGACTCAATGGTTTTGATGAAGCCAAGA
CCAACTCCAAGTAGAGTAGTCGaacGTGCAAAGTATGAACGTACAAAATA
CGAACGCACAATAAAGTTGTACAAATTTTTGATCGACTTATTAGAAGACC
AACACCCATGTGTCATGTGGAtcgatcggaaaatcgggatcTTCAAAATC
ACCGATTCGGAACAATTAGCCCAATTATGGGGTGAAGTCAAACTTAATGC
TTCGATGACGTATGAAAAACTTGCCCGCTCTTTCAGACATTATTACAAGA
AAGGAATCTTAGATAGCGGAGAAACTGTCATTTCACCGGTATCGAAAAAT
GGTAAACGCAAACTGTACTATAAATTCAGTGCAGTCACCTTAAAGCGTTT
TTTAGATATTGATCCTGAATAAATGAACAGTGGCCATACAGAGGACAATA
cagataaaaagaaaatgttgtCCGTGCAAAGGCCGTCATCTGCAACACAT
TGCGCATGCTGTACGAACCATGATGGAGGATACACCAATGCATCACATTC
ACTAACTTCGCCGTTTTCTCGTTCACCAACAAGCTCTGGATCTGCAATCA
GATTCATACGACAACAGAGTTTTGACCAACCACCACACCAGAAAGgacca
acaaaaacaaagattttcacACCAAATATCAACCTAAGAGATCttttttt
ATCTGAAGGAACATTTTCCAATTCTTCCTCTCAACTCATAAGTAATAATC
GGAAACGCAAGTCGACTGAAGAGAACCAGCAACTATCTCATTCACCAAAG
ACTACAGAACCGCCACCCTTGTTCAAATCAAGGTTAACCGATCATCTTGC
TAACGGGTTCAACGCTTTAGAATCAAGCAACAGTCTGTTAAAGAACACTC
CAAcaacaaaatattataaatatcAACAACCAACCACTACTTTATCCATA
GTTAAACCGAAACACCATAACCCTGGTCAATTAATTCGAATCCAACATTT
TGAAGAATCGCACAAagagaaaattgagaaatttccaATGACACGAAGTT
CACCAGGACCTTCAGGTTTCAACTACGAATTGAAACAAGAACCTTCTCAA
AATTTACCATATGATATCCAatcaacaaatataaaatacgAGAGACGTTC
ACCAAATATGCAATCTCCCTTCGAGAGGACCAACTCACCATATCGTTACC
CCTCACCACATAACAGTCAAAGAGCATCACCTAATCTGCAATCATCAACG
ACGATACTAACTTCCCCACCACCTTTAGTTCGAACAACGCCACCACCATC
AATGCCGCCACACACAACACCATACGTGGGCGGTGCATCGAATGTAGCAT
CAGTGAGATACAGGAGCTTTAAGCAACCCAATAGTTTTGATTCCACATCA
GCTAGCATTGATTCATCTCTTAGTGGAAGCGATGAAGAGGAAAACGACTC
AATGGTTTTGATGAAGCCAAGACCAACTCCAAGTAGAGTAGTCGaacGTG
CAAAGTATGAACGTACAAAATACGAACGCACAATAAAGTTGTACAAATTT
TTGATCGACTTATTAGAAGACCAACACCCATGTGTCATGTGGAtcgatcg
gaaaatcgggatcTTCAAAATCACCGATTCGGAACAATTAGCCCAATTAT
GGGGTGAAGTCAAACTTAATGCTTCGATGACGTATGAAAAACTTGCCCGC
TCTTTCAGACATTATTACAAGAAAGGAATCTTAGATAGCGGAGAAACTGT
CATTTCACCGGTATCGAAAAATGGTAAACGCAAACTGTACTATAAATTCA
GTGCAGTCACCTTAAAGCGTTTTTTAGATATTGATCCTGAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000091_pilon | genome | sc0000091_pilon:1257665..1262843 + |
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