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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000091_pilon:1163479..1166955- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12250.1.p1 ID=MSTRG.12250.1.p1|Name=MSTRG.12250.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3477bp|location=Sequence derived from alignment at sc0000091_pilon:1163479..1166955- (Clytia hemisphaerica_ch_hm2_pilon)
TAAAACTTAATCAAAATTTCACGTCCTTTGGACAACGAGAGAAGAAAAAA
ACATATAAAAATGTTAAAACATTGACTGGAGTTTCAGTTGTAAAAAAAGA
CATTGAAGAGAAAAGATGAGGCGAAAAATGGGCTTCGGCCTGCTTTTATG
GCTCTTCGTCCTTGTGACCGACGTCACAGGAGCCAATCAGCCACCACGTG
TTTACGAGGCAGCACAATGTTATACAGATCATACTAATTCAAATTATTTT
CACACTTACAAACATAAAGACTTAAATGGTAATGAAGTTCATTTTCAAAA
ATACAAAGGCAAGGTTTCCCTCGTTGTAAACGTAGCCTCGTTTTGAGCTT
TAACAAATGCTACATACACTGAATTAAATGTACTTGTTTCCAAATATGGA
CCAAATTCAATGTATGACCAAAATGGTAGGAAGACTAACAAATGTTCACT
TCAAGTTTTGGGATTTCCTTCAAATCAGGTAAGCATTTTTTAAATACCGT
ATGAGCAGTAGCGCAGACAGGTGTGAAGGAGTATTTGCTTAGGAGAGCAG
ATTTAAACGACACGGTTATTATGTTTTATACCACGAATAGGTAAGTACTT
TATCATAAAAATCTGCTCTCCTACGCAGATCGATCTTCATCCCTGTCTAC
CCTACCGTATGAGCATGACAATCTATCAGGAGGTAATGGCCAATAGGCCT
AAGGCTTCAATGCTACAAACTGGGGTCTGTGGTTCGAATCCCTCTCGTTC
TTTCAAGTATTTCGTTTAGCTCAGAGATAGCTGAGCTAGCAGAGCCATTT
TTCGAATTGTGTGCTATTTTTTGAGCAAATCGCAAGGGTGATAGAAGTAA
ACAACCTTACATCATTGAAGTGGACATTATTCAAACATGATTTTAGATGC
ATAGTTTGCCAGTCCCGGTATGGCTGTAATTGCCGGTACAATACAGTTTC
GTCTTATTTTTACCCACTTCACCCAGGGTGTCCCGAAAATAGTCCTGTGT
CAGACTACTTTCATTACAGTTGCGTCTAAAAAATATACTTTGTAAACACA
AATTCTTTTCTTCTTACACAAGTGGTATGACATAGGGCACCTTGTATATA
ATCAATAATGGGCTCTTCCAGAAAAAATCCGTTCATGGGGGGTGGAGGAT
ATATTATTTTTTTCATGCATTACCCCTGGACATTTTGATTTTTAACCCCC
TGGACACGGGTTATACCCCTGGACAAACATCAAATCAACCCCGTGGACAC
AAAAAATTACCCCTGGACATTGGAATTTACCCCCTGGACATTGCAAATTT
TTGGTATTTTTTCAATACCCCTGGACAATTCATCCTCCACCCCCCATGAA
CGGATTTTTTCTGGAAGAGCCCAATACTATAATATTCAATGGTTACCTAT
TTCTTTCAGTTCTATAGACAGGAGCCAGCCAAAGAGCATGAAATCATGAA
TTGTCTTCGGTACGTGAGACCAGGGAAAGGTTACATACCCAAATTTGAGC
TGTTCTCAAAAGTTGATGTCAATGGGGAAGATGCTATTGGCTTGTACAAA
TGGCTCAAAGTAAGTGACTTGTGTTCAGTTTGAAAAAAAACAACATCACT
ATTATGTATTGACGATAGCTAGGTAAGGAAGATAATCCCTTACTCCTACA
ATAGACACTCTCTAATTCGACCTTCTACTATTCGACACGCTCCATTATTC
GATAATACTGAAAGTCACTGTCAACAAAAACTACTGTAAACGACACTCCC
TTATTCGATGAAAATCCCTATCCCCCTTGAAAATCGAATTAGAGAGCGTC
AACTGTAAGTAGATTTTACGAAGTACCCAAGAATTTCTTTTTTGGGTTGG
AGCGTGGGGTCGCAACTTCGCTTGAAACGATTTTAAAATGAAAAAGGAAG
TAAATAAAGTAAAGGTGCGATCCTGAGCGTGTTATGTGATCTCTTTCTCT
GCTGCACTCATCCCTAAAAACGTTGCCAATTGAGAAGTTGTCCCCTCCCA
GCTGACACACAACGTTGTTTCAAAACGTTCATCTAACGTTATATTGACGT
TGTTAACGTTAGATAAACGTCAAAACAACGTTGTGTGCCAGCTGGGCTAT
CACTTGGCTTCTGAGCTAACCCGATACTACCTTTAATCCAAAGCCTCTAC
CTATATATTTAGAGATAGAGTTGTTGTGTAGTATAATTTTCAAACTCTGG
TCACACTTTAATATTATCTCCTTTTTAGTACATGTGTCCACGACCAACAC
AGAAGATCTCTTTCACCAAATATGTTCCTTGGACCCCAATCATGACCACC
GATATTGAATGGAATTTTGAAGAATTCCTATTGGACCATAAGGGTCGACC
AATCAGAAGATTCTCAGCTGATACGTTACCGTTGGAATATGAAAATGATA
TCAAAAGGGCGATTGACGCATGTAAAAAGGATTCGATGTAAGATAACTTA
ACTGGTAATAGAAAGGAGACTTTTCAAGGGGTTATTGTGGGTTGTTTTAA
AGAACCAATGCATAGTAGATCAGTTTTATGCTTTGAAAACGAAATCAAAA
TGGACAGCTTCGAGCTTGTCTGATATTATGTAAGATGAAACAAGAACAAG
TTTAGAATCAAAACAATCTAGTGTAAAATCTATTTTTATAAAGTTGACGT
GTTATAATACTCGCGAAAGGAATGCGAAGCAGTATTTTGATCAAAAACAC
AACACCTAGAGAAGCAGTTTTAGTGTTGTTTTAAAAATGACGCAATCTTA
TTGGTTTACGCTTTAGCTAATTGACAAGATTAGCCATTGTCACACTGAAA
GAGTGGAAAAGGGGGAGCGAAAAGTCTTGCATTTCTATTCAAAGAGCTTA
TAGTGATCGATTTTTTTTTTCATAAACAGAGTGTCATATGAACTCTTTTG
ACTTAAGATTCTAAATTCACAAATGCTCGATGAATTTAGCGAATCCACAA
AGCAGAACCAAGCAAGTAGAATAATTTTAAATCTTAATTCTATTAGGGAA
AATTAAAAGTTAAACCTTCGTTTTAAATTTCTCATTTTTATTTTCTAAGG
AAAATTTTAATGAACAGAATACGGTAGACTTTGACTTAGAATTTTAAATC
TTGTAATTATGTAACATTTTTTATTTTAGCAAAAATATTTAGTTTCATAA
TATGATTGTTATTTTCATGGATAAAACATATGACGGTAATAGCTTGACTC
GATGAATCATTCGAAGGCTATTATCTGACGATCTCGATTAGTTAGAAATT
TTTTGTACATTTAATTTTTCTGATGAAAGAGATCTTATTTTTTTCAGAAT
TTTTAACAAGAATATGATGTATACTAATTTAAGACATAGAAAAAAGAAAA
TGAATAAACTACAGATAAAATATTTTGTAATTTCAATTTAATTCATAAGT
CCGTCCGTTATCCCTACTCGAATTCTATTCACCGAGAATGGTTTCACCCG
GTATTTTCAACTCTAGATAGACTTTGA Coding sequence (CDS) from alignment at sc0000091_pilon:1163479..1166955- >MSTRG.12250.1.p1 ID=MSTRG.12250.1.p1|Name=MSTRG.12250.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1296bp|location=Sequence derived from alignment at sc0000091_pilon:1163479..1166955- (Clytia hemisphaerica_ch_hm2_pilon)
TACATGTGTCCACGACCAACACAGAAGATCTCTTTCACCAAATATGTTCC
TTGGACCCCAATCATGACCACCGATATTGAATGGAATTTTGAAGAATTCC
TATTGGACCATAAGGGTCGACCAATCAGAAGATTCTCAGCTGATACGTTA
CCGTTGGAATATGAAAATGATATCAAAAGGGCGATTGACGCATGTAAAAA
GGATTCGATGTAATTCTATAGACAGGAGCCAGCCAAAGAGCATGAAATCA
TGAATTGTCTTCGGTACGTGAGACCAGGGAAAGGTTACATACCCAAATTT
GAGCTGTTCTCAAAAGTTGATGTCAATGGGGAAGATGCTATTGGCTTGTA
CAAATGGCTCAAAATGTATGACCAAAATGGTAGGAAGACTAACAAATGTT
CACTTCAAGTTTTGGGATTTCCTTCAAATCAGTACATGTGTCCACGACCA
ACACAGAAGATCTCTTTCACCAAATATGTTCCTTGGACCCCAATCATGAC
CACCGATATTGAATGGAATTTTGAAGAATTCCTATTGGACCATAAGGGTC
GACCAATCAGAAGATTCTCAGCTGATACGTTACCGTTGGAATATGAAAAT
GATATCAAAAGGGCGATTGACGCATGTAAAAAGGATTCGATGTAATTCTA
TAGACAGGAGCCAGCCAAAGAGCATGAAATCATGAATTGTCTTCGGTACG
TGAGACCAGGGAAAGGTTACATACCCAAATTTGAGCTGTTCTCAAAAGTT
GATGTCAATGGGGAAGATGCTATTGGCTTGTACAAATGGCTCAAAATGTA
TGACCAAAATGGTAGGAAGACTAACAAATGTTCACTTCAAGTTTTGGGAT
TTCCTTCAAATCAGTACATGTGTCCACGACCAACACAGAAGATCTCTTTC
ACCAAATATGTTCCTTGGACCCCAATCATGACCACCGATATTGAATGGAA
TTTTGAAGAATTCCTATTGGACCATAAGGGTCGACCAATCAGAAGATTCT
CAGCTGATACGTTACCGTTGGAATATGAAAATGATATCAAAAGGGCGATT
GACGCATGTAAAAAGGATTCGATGTAATTCTATAGACAGGAGCCAGCCAA
AGAGCATGAAATCATGAATTGTCTTCGGTACGTGAGACCAGGGAAAGGTT
ACATACCCAAATTTGAGCTGTTCTCAAAAGTTGATGTCAATGGGGAAGAT
GCTATTGGCTTGTACAAATGGCTCAAAATGTATGACCAAAATGGTAGGAA
GACTAACAAATGTTCACTTCAAGTTTTGGGATTTCCTTCAAATCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000091_pilon | genome | sc0000091_pilon:1163479..1166955 - |
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